RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 C20orf85Q9H1P6 137 aa8.71□□□□□ -1.02
VAMP1-206ENST00000538970 PXMP4Q9Y6I8 212 aa8.71□□□□□ -1.02
VAMP1-206ENST00000538970 TRAV26-1A0A087WT03 109 aa8.7□□□□□ -1.02
VAMP1-206ENST00000538970 C16orf90A8MZG2 172 aa8.7□□□□□ -1.02
VAMP1-206ENST00000538970 L7N2F9 121 aa8.7□□□□□ -1.02
VAMP1-206ENST00000538970 VAMP2P63027 116 aa8.7□□□□□ -1.02
VAMP1-206ENST00000538970 GNPNAT1Q96EK6 184 aaPredicted RBP8.7□□□□□ -1.02
VAMP1-206ENST00000538970 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
VAMP1-206ENST00000538970 ODF3Q96PU9 254 aa8.7□□□□□ -1.02
VAMP1-206ENST00000538970 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
VAMP1-206ENST00000538970 TRAV5A0A0B4J249 113 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 NPIPB6E9PJ23 425 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 CDK2AP2O75956 126 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 RLN2P04090 185 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 M6PRP20645 277 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 HOXA5P20719 270 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 CAV2P51636 162 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 OR5I1Q13606 314 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 ZNF846Q147U1 533 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 GUK1Q16774 197 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 MIC13Q5XKP0 118 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 Q6ZRG5 221 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 NRARPQ7Z6K4 114 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 CCDC28AQ8IWP9 274 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 RXFP4Q8TDU9 374 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 KRTAP1-5Q9BYS1 174 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 C11orf1Q9H5F2 150 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 DNAJC4Q9NNZ3 241 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 WDR83OSQ9Y284 106 aa8.69□□□□□ -1.02
VAMP1-206ENST00000538970 LSM5Q9Y4Y9 91 aaKnown RBP8.69□□□□□ -1.02
VAMP1-206ENST00000538970 A0A0J9YY99 117 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 GAGE12BA1L429 117 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 SNURFLB1AK76 121 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 J3KRW8 73 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 PLA2G10O15496 165 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 GAGE7O76087 117 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 CST7O76096 145 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 GAGE12FP0CL80 117 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 GAGE12GP0CL81 117 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 GAGE12IP0CL82 117 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 LEPP41159 167 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 BCAP31P51572 246 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 RAB31Q13636 194 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 VWC2Q2TAL6 325 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 OR1L4Q8NGR5 311 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 PFDN5Q99471 154 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 Q9H8V8 135 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 UQCC1Q9NVA1 299 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 ZNF586Q9NXT0 402 aa8.68□□□□□ -1.02
VAMP1-206ENST00000538970 TRAV12-3A0A0B4J271 114 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 FAM24AA6NFZ4 105 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 FAM25EA8MYX2 175 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 H3BNG1 76 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 LYRM1O43325 122 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 ZNF253O75346 499 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 TTC32Q5I0X7 151 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 ZNF431Q8TF32 576 aaPredicted RBP8.67□□□□□ -1.02
VAMP1-206ENST00000538970 SEC22CQ9BRL7 303 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 PYGO2Q9BRQ0 406 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 Q9H3A6 140 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 TMPRSS5Q9H3S3 457 aa8.67□□□□□ -1.02
VAMP1-206ENST00000538970 TRBV19A0A075B6N1 114 aa8.66□□□□□ -1.02
VAMP1-206ENST00000538970 TRAV6A0A075B6T7 132 aa8.66□□□□□ -1.02
VAMP1-206ENST00000538970 UBE2L5PA0A1B0GUS4 154 aa8.66□□□□□ -1.02
VAMP1-206ENST00000538970 C5orf51A6NDU8 294 aa8.66□□□□□ -1.02
VAMP1-206ENST00000538970 TCRBP04435 133 aa8.66□□□□□ -1.02
VAMP1-206ENST00000538970 RPL29P47914 159 aaKnown RBP8.66□□□□□ -1.02
VAMP1-206ENST00000538970 SULT1A1P50225 295 aa8.66□□□□□ -1.02
VAMP1-206ENST00000538970 DAZ2Q13117 558 aaKnown RBP8.66□□□□□ -1.02
VAMP1-206ENST00000538970 ESRGQ1W209 222 aa8.66□□□□□ -1.02
VAMP1-206ENST00000538970 MRPL53Q96EL3 112 aaKnown RBP8.66□□□□□ -1.02
VAMP1-206ENST00000538970 LYRM2Q9NU23 88 aaPredicted RBP8.66□□□□□ -1.02
VAMP1-206ENST00000538970 SLC39A9Q9NUM3 307 aa8.66□□□□□ -1.02
VAMP1-206ENST00000538970 NUDT15Q9NV35 164 aa8.66□□□□□ -1.02
VAMP1-206ENST00000538970 MRPS16Q9Y3D3 137 aaKnown RBP8.66□□□□□ -1.02
VAMP1-206ENST00000538970 IGSF23A1L1A6 192 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 M0R3E3 92 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 SLC25A5P05141 298 aaKnown RBP8.65□□□□□ -1.02
VAMP1-206ENST00000538970 PVALBP20472 110 aaPredicted RBP8.65□□□□□ -1.02
VAMP1-206ENST00000538970 S100A10P60903 97 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 BAXQ07812 192 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 Q6ZTI0 123 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 C11orf72Q8NBR9 251 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 CHAC2Q8WUX2 184 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 FAM19A4Q96LR4 140 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 C2orf50Q96LR7 162 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 TMEM14CQ9P0S9 112 aa8.65□□□□□ -1.02
VAMP1-206ENST00000538970 APOBP04114 4563 aaKnown RBP8.65□□□□□ -1.03
VAMP1-206ENST00000538970 A0A1W2PPQ1 181 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 C7orf71A4D174 169 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 KLLNB2CW77 178 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 NDUFB4O95168 129 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 S100A11P31949 105 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 ERCC8Q13216 396 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 IL15RAQ13261 267 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 STX12Q86Y82 276 aa8.64□□□□□ -1.03
VAMP1-206ENST00000538970 Q8N1X5 172 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms