RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 CST9LP1Q5W188 147 aa17.45■□□□□ 0.38
TMEM260-202ENST00000538838 Q8N1Y9 231 aa17.45■□□□□ 0.38
TMEM260-202ENST00000538838 CLEC5AQ9NY25 188 aa17.45■□□□□ 0.38
TMEM260-202ENST00000538838 ARL2-SNX15V9GYD0 113 aa17.45■□□□□ 0.38
TMEM260-202ENST00000538838 F6UB75 175 aa17.44■□□□□ 0.38
TMEM260-202ENST00000538838 ATP5G3P48201 142 aa17.44■□□□□ 0.38
TMEM260-202ENST00000538838 SUMO1P63165 101 aaKnown RBP17.44■□□□□ 0.38
TMEM260-202ENST00000538838 HAGHQ16775 308 aa17.44■□□□□ 0.38
TMEM260-202ENST00000538838 RPUSD4Q96CM3 377 aaKnown RBP17.44■□□□□ 0.38
TMEM260-202ENST00000538838 FAM110AQ9BQ89 295 aa17.44■□□□□ 0.38
TMEM260-202ENST00000538838 PRELID1Q9Y255 219 aa17.44■□□□□ 0.38
TMEM260-202ENST00000538838 PRAC2D3DTV9 90 aa17.43■□□□□ 0.38
TMEM260-202ENST00000538838 PRB2P02812 416 aaPredicted RBP17.43■□□□□ 0.38
TMEM260-202ENST00000538838 CMC4P56277 68 aaPredicted RBP17.43■□□□□ 0.38
TMEM260-202ENST00000538838 MRPL53Q96EL3 112 aaKnown RBP17.43■□□□□ 0.38
TMEM260-202ENST00000538838 RPH3ALQ9UNE2 315 aa17.43■□□□□ 0.38
TMEM260-202ENST00000538838 AGRNO00468 2067 aa17.43■□□□□ 0.38
TMEM260-202ENST00000538838 KNCNA6PVL3 124 aa17.43■□□□□ 0.38
TMEM260-202ENST00000538838 IFNA1P01562 189 aa17.43■□□□□ 0.38
TMEM260-202ENST00000538838 SLC25A5P05141 298 aaKnown RBP17.43■□□□□ 0.38
TMEM260-202ENST00000538838 GNG5P63218 68 aa17.43■□□□□ 0.38
TMEM260-202ENST00000538838 CLLU1Q5K131 121 aa17.43■□□□□ 0.38
TMEM260-202ENST00000538838 GDF5OSQ5U4N7 250 aa17.43■□□□□ 0.38
TMEM260-202ENST00000538838 DEFB125Q8N687 156 aa17.43■□□□□ 0.38
TMEM260-202ENST00000538838 BCL2P10415 239 aa17.42■□□□□ 0.38
TMEM260-202ENST00000538838 CMTM2Q8TAZ6 248 aa17.42■□□□□ 0.38
TMEM260-202ENST00000538838 CITED4Q96RK1 184 aa17.42■□□□□ 0.38
TMEM260-202ENST00000538838 ZNF705DP0CH99 300 aaPredicted RBP17.41■□□□□ 0.38
TMEM260-202ENST00000538838 ZNF705BP0CI00 300 aaPredicted RBP17.41■□□□□ 0.38
TMEM260-202ENST00000538838 PMS2P11Q13670 270 aa17.41■□□□□ 0.38
TMEM260-202ENST00000538838 ACTL10Q5JWF8 245 aa17.41■□□□□ 0.38
TMEM260-202ENST00000538838 C5orf17Q8NAS9 161 aa17.41■□□□□ 0.38
TMEM260-202ENST00000538838 C11orf94C9JXX5 98 aa17.4■□□□□ 0.38
TMEM260-202ENST00000538838 NKX6-2Q9C056 277 aaPredicted RBP17.4■□□□□ 0.38
TMEM260-202ENST00000538838 SAV1Q9H4B6 383 aaPredicted RBP17.4■□□□□ 0.38
TMEM260-202ENST00000538838 AURKAIP1Q9NWT8 199 aaPredicted RBP17.4■□□□□ 0.38
TMEM260-202ENST00000538838 IGKV2-40A0A087WW87 121 aaPredicted RBP17.39■□□□□ 0.38
TMEM260-202ENST00000538838 LOC102723971A0A1B0GUV8 181 aa17.39■□□□□ 0.38
TMEM260-202ENST00000538838 IGKV2D-40P01614 121 aaPredicted RBP17.39■□□□□ 0.38
TMEM260-202ENST00000538838 CSN1S1P47710 185 aa17.39■□□□□ 0.38
TMEM260-202ENST00000538838 FOXI2Q6ZQN5 318 aa17.39■□□□□ 0.38
TMEM260-202ENST00000538838 CCDC28AQ8IWP9 274 aa17.39■□□□□ 0.38
TMEM260-202ENST00000538838 A0A0J9YX75 114 aa17.39■□□□□ 0.37
TMEM260-202ENST00000538838 EBLN2Q6P2I7 272 aa17.39■□□□□ 0.37
TMEM260-202ENST00000538838 OR8A1Q8NGG7 326 aa17.39■□□□□ 0.37
TMEM260-202ENST00000538838 RXFP4Q8TDU9 374 aa17.39■□□□□ 0.37
TMEM260-202ENST00000538838 RARRES2Q99969 163 aa17.39■□□□□ 0.37
TMEM260-202ENST00000538838 DIRC3C9JPN6 131 aa17.38■□□□□ 0.37
TMEM260-202ENST00000538838 MEF2BQ02080 365 aaPredicted RBP17.38■□□□□ 0.37
TMEM260-202ENST00000538838 HIST1H1AQ02539 215 aaPredicted RBP17.38■□□□□ 0.37
TMEM260-202ENST00000538838 TOR2AQ5JU69 321 aa17.38■□□□□ 0.37
TMEM260-202ENST00000538838 FAM210AQ96ND0 272 aa17.38■□□□□ 0.37
TMEM260-202ENST00000538838 SRD5A3Q9H8P0 318 aa17.38■□□□□ 0.37
TMEM260-202ENST00000538838 VAX2Q9UIW0 290 aa17.38■□□□□ 0.37
TMEM260-202ENST00000538838 RBFOX3A6NFN3 312 aa17.37■□□□□ 0.37
TMEM260-202ENST00000538838 HLA-DRB4P13762 266 aa17.37■□□□□ 0.37
TMEM260-202ENST00000538838 GOLT1AQ6ZVE7 132 aa17.37■□□□□ 0.37
TMEM260-202ENST00000538838 EPDR1Q9UM22 224 aa17.37■□□□□ 0.37
TMEM260-202ENST00000538838 HLA-DRB4X5D2U9 266 aa17.37■□□□□ 0.37
TMEM260-202ENST00000538838 TCRAP04437 139 aa17.36■□□□□ 0.37
TMEM260-202ENST00000538838 PEX7O00628 323 aa17.36■□□□□ 0.37
TMEM260-202ENST00000538838 TAGLN2P37802 199 aaKnown RBP17.36■□□□□ 0.37
TMEM260-202ENST00000538838 CNN1P51911 297 aaKnown RBP17.36■□□□□ 0.37
TMEM260-202ENST00000538838 ERCC8Q13216 396 aa17.36■□□□□ 0.37
TMEM260-202ENST00000538838 ZNF506Q5JVG8 444 aa17.36■□□□□ 0.37
TMEM260-202ENST00000538838 OR10J6PQ8NGY7 276 aa17.36■□□□□ 0.37
TMEM260-202ENST00000538838 SCO2A0A1W2PP80 73 aa17.35■□□□□ 0.37
TMEM260-202ENST00000538838 H3BMM0 161 aa17.35■□□□□ 0.37
TMEM260-202ENST00000538838 IGKV3-20P01619 116 aa17.35■□□□□ 0.37
TMEM260-202ENST00000538838 IGHV4-30-4P0DP06 118 aa17.35■□□□□ 0.37
TMEM260-202ENST00000538838 STHQ8IWL8 128 aa17.35■□□□□ 0.37
TMEM260-202ENST00000538838 ARL6IP6Q8N6S5 226 aa17.35■□□□□ 0.37
TMEM260-202ENST00000538838 ATG101Q9BSB4 218 aa17.35■□□□□ 0.37
TMEM260-202ENST00000538838 EIF5A2Q9GZV4 153 aaKnown RBP17.35■□□□□ 0.37
TMEM260-202ENST00000538838 K7EIL1 84 aa17.34■□□□□ 0.37
TMEM260-202ENST00000538838 OR4B1Q8NGF8 309 aa17.34■□□□□ 0.37
TMEM260-202ENST00000538838 VGLL1Q99990 258 aa17.34■□□□□ 0.37
TMEM260-202ENST00000538838 NPIPB6E9PJ23 425 aa17.33■□□□□ 0.37
TMEM260-202ENST00000538838 TRPT1Q86TN4 253 aaKnown RBP17.33■□□□□ 0.37
TMEM260-202ENST00000538838 CYB561D1Q8N8Q1 229 aa17.33■□□□□ 0.37
TMEM260-202ENST00000538838 TXNDC17Q9BRA2 123 aa17.33■□□□□ 0.37
TMEM260-202ENST00000538838 TCEAL7Q9BRU2 100 aa17.33■□□□□ 0.37
TMEM260-202ENST00000538838 TRAV8-1A0A0A6YYK1 113 aa17.32■□□□□ 0.36
TMEM260-202ENST00000538838 RBMY1BA6NDE4 496 aaKnown RBP17.32■□□□□ 0.36
TMEM260-202ENST00000538838 RBMY1EA6NEQ0 496 aaKnown RBP17.32■□□□□ 0.36
TMEM260-202ENST00000538838 DUSP14O95147 198 aaKnown RBP17.32■□□□□ 0.36
TMEM260-202ENST00000538838 RBMY1DP0C7P1 496 aaKnown RBP17.32■□□□□ 0.36
TMEM260-202ENST00000538838 HIST1H2BAQ96A08 127 aa17.32■□□□□ 0.36
TMEM260-202ENST00000538838 SGK494Q96LW2 274 aa17.32■□□□□ 0.36
TMEM260-202ENST00000538838 TUBA4BQ9H853 241 aa17.32■□□□□ 0.36
TMEM260-202ENST00000538838 RBAKDNA6NC62 111 aa17.32■□□□□ 0.36
TMEM260-202ENST00000538838 RPL35AP18077 110 aaKnown RBP17.32■□□□□ 0.36
TMEM260-202ENST00000538838 LINC00479Q96M42 142 aa17.32■□□□□ 0.36
TMEM260-202ENST00000538838 SRSF3P84103 164 aaKnown RBP17.31■□□□□ 0.36
TMEM260-202ENST00000538838 C9orf47Q6ZRZ4 202 aa17.31■□□□□ 0.36
TMEM260-202ENST00000538838 Q8TAT8 98 aa17.31■□□□□ 0.36
TMEM260-202ENST00000538838 AGPAT4-IT1Q9H0P7 198 aa17.31■□□□□ 0.36
TMEM260-202ENST00000538838 TRAV34A0A0B4J273 112 aa17.3■□□□□ 0.36
TMEM260-202ENST00000538838 SERTM2A0A1B0GWG4 89 aa17.3■□□□□ 0.36
TMEM260-202ENST00000538838 A8MTW9 85 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms