RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 A0A1W2PS18 150 aa12.96□□□□□ -0.33
CLN6-202ENST00000538696 WIPF1O43516 503 aa12.96□□□□□ -0.33
CLN6-202ENST00000538696 BMI1P35226 326 aa12.96□□□□□ -0.33
CLN6-202ENST00000538696 RPL35P42766 123 aaKnown RBP12.96□□□□□ -0.33
CLN6-202ENST00000538696 INSL3P51460 131 aa12.96□□□□□ -0.33
CLN6-202ENST00000538696 OXLD1Q5BKU9 147 aa12.96□□□□□ -0.33
CLN6-202ENST00000538696 C5orf17Q8NAS9 161 aa12.96□□□□□ -0.33
CLN6-202ENST00000538696 GRAMD2BQ96HH9 432 aa12.96□□□□□ -0.33
CLN6-202ENST00000538696 TCEAL7Q9BRU2 100 aa12.96□□□□□ -0.33
CLN6-202ENST00000538696 SDF2L1Q9HCN8 221 aa12.96□□□□□ -0.33
CLN6-202ENST00000538696 TRBV20OR9-2A0A075B6H5 130 aa12.95□□□□□ -0.34
CLN6-202ENST00000538696 ZNF253O75346 499 aa12.95□□□□□ -0.34
CLN6-202ENST00000538696 TMEM241Q24JQ0 296 aa12.95□□□□□ -0.34
CLN6-202ENST00000538696 CD300EQ496F6 205 aaPredicted RBP12.95□□□□□ -0.34
CLN6-202ENST00000538696 SAMD5Q5TGI4 173 aa12.95□□□□□ -0.34
CLN6-202ENST00000538696 LYPD1Q8N2G4 141 aa12.95□□□□□ -0.34
CLN6-202ENST00000538696 GPR61Q9BZJ8 451 aa12.95□□□□□ -0.34
CLN6-202ENST00000538696 C7orf77A4D0Y5 90 aa12.94□□□□□ -0.34
CLN6-202ENST00000538696 IZUMO1RA6ND01 250 aa12.94□□□□□ -0.34
CLN6-202ENST00000538696 PGPEP1LA6NFU8 196 aa12.94□□□□□ -0.34
CLN6-202ENST00000538696 G3V4G9 280 aa12.94□□□□□ -0.34
CLN6-202ENST00000538696 PRB4P10163 310 aaPredicted RBP12.94□□□□□ -0.34
CLN6-202ENST00000538696 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
CLN6-202ENST00000538696 IGFL4Q6B9Z1 124 aa12.94□□□□□ -0.34
CLN6-202ENST00000538696 TMEM61Q8N0U2 210 aa12.94□□□□□ -0.34
CLN6-202ENST00000538696 HIST1H2BAQ96A08 127 aa12.94□□□□□ -0.34
CLN6-202ENST00000538696 LINC00479Q96M42 142 aa12.94□□□□□ -0.34
CLN6-202ENST00000538696 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
CLN6-202ENST00000538696 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 HELTA6NFD8 242 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 M0R3E3 92 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 TCRAP04437 139 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 HLA-DMBP28068 263 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 CNN1P51911 297 aaKnown RBP12.93□□□□□ -0.34
CLN6-202ENST00000538696 PSG9Q00887 426 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 ADIRFQ15847 76 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 CENPWQ5EE01 88 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 TCF24Q7RTU0 167 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 OR2K2Q8NGT1 345 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 IGF2BP2-AS1Q96M15 143 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 ATG101Q9BSB4 218 aa12.93□□□□□ -0.34
CLN6-202ENST00000538696 ZNF331Q9NQX6 463 aaPredicted RBP12.93□□□□□ -0.34
CLN6-202ENST00000538696 TRAV8-2A0A0B4J237 113 aa12.92□□□□□ -0.34
CLN6-202ENST00000538696 C9JCJ5 164 aa12.92□□□□□ -0.34
CLN6-202ENST00000538696 PNRC1Q12796 327 aaPredicted RBP12.92□□□□□ -0.34
CLN6-202ENST00000538696 RHEBQ15382 184 aa12.92□□□□□ -0.34
CLN6-202ENST00000538696 CMTM2Q8TAZ6 248 aa12.92□□□□□ -0.34
CLN6-202ENST00000538696 AAMDCQ9H7C9 122 aa12.92□□□□□ -0.34
CLN6-202ENST00000538696 RPS10P5Q9NQ39 176 aa12.92□□□□□ -0.34
CLN6-202ENST00000538696 AURKAIP1Q9NWT8 199 aaPredicted RBP12.92□□□□□ -0.34
CLN6-202ENST00000538696 GOLT1AQ6ZVE7 132 aa12.91□□□□□ -0.34
CLN6-202ENST00000538696 LINC01551Q86U37 167 aa12.91□□□□□ -0.34
CLN6-202ENST00000538696 SLC50A1Q9BRV3 221 aa12.91□□□□□ -0.34
CLN6-202ENST00000538696 SORL1Q92673 2214 aa12.91□□□□□ -0.34
CLN6-202ENST00000538696 TRAV25A0A0B4J276 109 aa12.9□□□□□ -0.34
CLN6-202ENST00000538696 DNASE2O00115 360 aaPredicted RBP12.9□□□□□ -0.34
CLN6-202ENST00000538696 ISLRO14498 428 aa12.9□□□□□ -0.34
CLN6-202ENST00000538696 GNG4P50150 75 aa12.9□□□□□ -0.34
CLN6-202ENST00000538696 MEOX2P50222 304 aa12.9□□□□□ -0.34
CLN6-202ENST00000538696 TAS2R60P59551 318 aa12.9□□□□□ -0.34
CLN6-202ENST00000538696 TMEM183BQ1AE95 376 aa12.9□□□□□ -0.34
CLN6-202ENST00000538696 LCN12Q6JVE5 192 aa12.9□□□□□ -0.34
CLN6-202ENST00000538696 SGK494Q96LW2 274 aa12.9□□□□□ -0.34
CLN6-202ENST00000538696 IGKV3-7A0A075B6H7 116 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 DIRC3C9JPN6 131 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 TSPAN4O14817 238 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 EGFEM1PQ0D2K5 195 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 BTN1A1Q13410 526 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 RBPMS2Q6ZRY4 209 aaKnown RBP12.89□□□□□ -0.35
CLN6-202ENST00000538696 CBLN2Q8IUK8 224 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 OCC1Q8TAD7 63 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 KLF12Q9Y4X4 402 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 MGAM2Q2M2H8 2515 aa12.89□□□□□ -0.35
CLN6-202ENST00000538696 TRAV8-1A0A0A6YYK1 113 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 SOCS3O14543 225 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 IGLV2-8P01709 118 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 UBE2G1P62253 170 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 TMEM88Q6PEY1 159 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 LY96Q9Y6Y9 160 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
CLN6-202ENST00000538696 K7EN84 100 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 IGLV2-11P01706 119 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 CSN1S1P47710 185 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 RPL11P62913 178 aaKnown RBP12.88□□□□□ -0.35
CLN6-202ENST00000538696 BEAN1Q3B7T3 259 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 RNF212Q495C1 297 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 Q86TA4 180 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 GBGT1Q8N5D6 347 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 NHLRC2Q8NBF2 726 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 ISOC2Q96AB3 205 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 FMC1Q96HJ9 113 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 C16orf92Q96LL3 132 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 C20orf173Q96LM9 149 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
CLN6-202ENST00000538696 MS4A6AQ9H2W1 248 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 NRN1Q9NPD7 142 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 PRELID1Q9Y255 219 aa12.88□□□□□ -0.35
CLN6-202ENST00000538696 IGKV2-40A0A087WW87 121 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms