RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SCGB2A1O75556 95 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 IGLV1-40P01703 118 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 CRIP1P50238 77 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 TM4SF20Q53R12 229 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 SIGLECL1Q8N7X8 197 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 NEU1Q99519 415 aa10.83□□□□□ -0.68
ACTN1-205ENST00000538545 CHEK1O14757 476 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 HOXA5P20719 270 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 CFHR3Q02985 330 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 METTL26Q96S19 204 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 XKRY2A2RUG3 117 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 PCP4L1A6NKN8 68 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 HIGD1CA8MV81 97 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 PSG3Q16557 428 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 NUP35Q8NFH5 326 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 MBD6Q96DN6 1003 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 SMR3AQ99954 134 aa10.82□□□□□ -0.68
ACTN1-205ENST00000538545 ZNF331Q9NQX6 463 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-205ENST00000538545 TMSB15BA0A087X1C1 80 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 F2Z2F3 143 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 TMEM183AQ8IXX5 376 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 LINC00518Q8N0U6 118 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 BTF3L4Q96K17 158 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 SSBP4Q9BWG4 385 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-205ENST00000538545 SMIM27A0A1W2PRY6 76 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 NUPR1O60356 82 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 CAMPP49913 170 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 RELQ04864 619 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-205ENST00000538545 C18orf65Q6ZTR6 163 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 GTSF1Q8WW33 167 aa10.81□□□□□ -0.68
ACTN1-205ENST00000538545 MRPL18Q9H0U6 180 aaKnown RBP10.81□□□□□ -0.68
ACTN1-205ENST00000538545 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 CDPF1Q6NVV7 123 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 AGRNO00468 2067 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 MUC21A0A0G2JKD1 596 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 MUC21A0A140T8X8 626 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 P01737 135 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 FABP4P15090 132 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 RPL11P62913 178 aaKnown RBP10.8□□□□□ -0.68
ACTN1-205ENST00000538545 MUC21Q5SSG8 566 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 LCN12Q6JVE5 192 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 TMEM256Q8N2U0 113 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 C12orf57Q99622 126 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 ZNF702PQ9H963 129 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 FLNBO75369 2602 aaKnown RBP10.8□□□□□ -0.68
ACTN1-205ENST00000538545 C19orf71A6NCJ1 209 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 PSMB8P28062 276 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 Q6ZQT7 251 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 HIST3H2BBQ8N257 126 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 TMEM75Q8N9X5 138 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 NAT8BQ9UHF3 227 aa10.8□□□□□ -0.68
ACTN1-205ENST00000538545 HIVEP2P31629 2446 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.79□□□□□ -0.68
ACTN1-205ENST00000538545 TRAV8-2A0A0B4J237 113 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 PDE6HQ13956 83 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 TCEAL7Q9BRU2 100 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 TPPP3Q9BW30 176 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 GAR1Q9NY12 217 aaKnown RBP10.79□□□□□ -0.68
ACTN1-205ENST00000538545 FAM181BA6NEQ2 426 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 CDX1P47902 265 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-205ENST00000538545 ZNF80P51504 273 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-205ENST00000538545 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 PRSS57Q6UWY2 283 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 C8orf86Q6ZUL3 223 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 LYPD1Q8N2G4 141 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 GBGT1Q8N5D6 347 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 DAZAP1Q96EP5 407 aaKnown RBP10.79□□□□□ -0.68
ACTN1-205ENST00000538545 RNF24Q9Y225 148 aa10.79□□□□□ -0.68
ACTN1-205ENST00000538545 SETXQ7Z333 2677 aaKnown RBP10.78□□□□□ -0.68
ACTN1-205ENST00000538545 FAM231DQ6ZW35 169 aa10.78□□□□□ -0.68
ACTN1-205ENST00000538545 OR10D4PQ8NGN7 298 aa10.78□□□□□ -0.68
ACTN1-205ENST00000538545 GRAMD2BQ96HH9 432 aa10.78□□□□□ -0.68
ACTN1-205ENST00000538545 DUX3Q96PT4 197 aa10.78□□□□□ -0.68
ACTN1-205ENST00000538545 RPP21Q9H633 154 aaKnown RBP10.78□□□□□ -0.68
ACTN1-205ENST00000538545 CSN1S1P47710 185 aa10.78□□□□□ -0.68
ACTN1-205ENST00000538545 S100A7AQ86SG5 101 aa10.78□□□□□ -0.68
ACTN1-205ENST00000538545 C11orf44Q8N8P7 122 aa10.78□□□□□ -0.68
ACTN1-205ENST00000538545 USMG5Q96IX5 58 aa10.78□□□□□ -0.68
ACTN1-205ENST00000538545 PRSS22Q9GZN4 317 aa10.78□□□□□ -0.68
ACTN1-205ENST00000538545 J3KRW8 73 aa10.77□□□□□ -0.68
ACTN1-205ENST00000538545 PSG9Q00887 426 aa10.77□□□□□ -0.68
ACTN1-205ENST00000538545 KRTAP1-1Q07627 177 aa10.77□□□□□ -0.68
ACTN1-205ENST00000538545 SLAQ13239 276 aa10.77□□□□□ -0.68
ACTN1-205ENST00000538545 TMEM136Q6ZRR5 245 aa10.77□□□□□ -0.68
ACTN1-205ENST00000538545 GPHB5Q86YW7 130 aa10.77□□□□□ -0.68
ACTN1-205ENST00000538545 TSKUQ8WUA8 353 aa10.77□□□□□ -0.68
ACTN1-205ENST00000538545 C20orf173Q96LM9 149 aa10.77□□□□□ -0.68
ACTN1-205ENST00000538545 NPFFR1Q9GZQ6 430 aa10.77□□□□□ -0.68
ACTN1-205ENST00000538545 U3KQE9 123 aa10.77□□□□□ -0.69
ACTN1-205ENST00000538545 IZUMO1RA6ND01 250 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 K7EQM0 130 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 TP53TG3Q9ULZ0 132 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 MEOX2P50222 304 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 C9orf139Q6ZV77 190 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 GLMPQ8WWB7 406 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 PEF1Q9UBV8 284 aaKnown RBP10.76□□□□□ -0.69
ACTN1-205ENST00000538545 FN1P02751 2386 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms