RNA–Protein interactions for RNA: ENST00000537328.5

TMEM258-204, Transcript of transmembrane protein 258, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM258, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-204ENST00000537328 HIST1H2BHQ93079 126 aa12.54□□□□□ -0.4
TMEM258-204ENST00000537328 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
TMEM258-204ENST00000537328 HIST1H2BNQ99877 126 aa12.54□□□□□ -0.4
TMEM258-204ENST00000537328 HIST1H2BMQ99879 126 aa12.54□□□□□ -0.4
TMEM258-204ENST00000537328 PEF1Q9UBV8 284 aaKnown RBP12.54□□□□□ -0.4
TMEM258-204ENST00000537328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMEM258-204ENST00000537328 FAM231BA6NCW3 169 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 S100A8P05109 93 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 HOXA5P20719 270 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 FABP9Q0Z7S8 132 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 FOXE3Q13461 319 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 PRR27Q6MZM9 219 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 C16orf54Q6UWD8 224 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 TSKUQ8WUA8 353 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 GNB1LQ9BYB4 327 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 RPP21Q9H633 154 aaKnown RBP12.53□□□□□ -0.4
TMEM258-204ENST00000537328 ZNF331Q9NQX6 463 aaPredicted RBP12.53□□□□□ -0.4
TMEM258-204ENST00000537328 NAT8BQ9UHF3 227 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 SMAD5-AS1Q9Y6J3 95 aa12.53□□□□□ -0.4
TMEM258-204ENST00000537328 RBAKDNA6NC62 111 aa12.52□□□□□ -0.41
TMEM258-204ENST00000537328 K7EMT4 169 aa12.52□□□□□ -0.41
TMEM258-204ENST00000537328 PHOX2AO14813 284 aa12.52□□□□□ -0.41
TMEM258-204ENST00000537328 HOXA3O43365 443 aaPredicted RBP12.52□□□□□ -0.41
TMEM258-204ENST00000537328 CT45A10P0DMU9 189 aa12.52□□□□□ -0.41
TMEM258-204ENST00000537328 PSMB8P28062 276 aa12.52□□□□□ -0.41
TMEM258-204ENST00000537328 Q6ZS46 218 aa12.52□□□□□ -0.41
TMEM258-204ENST00000537328 GBGT1Q8N5D6 347 aa12.52□□□□□ -0.41
TMEM258-204ENST00000537328 GFRA4Q9GZZ7 299 aa12.52□□□□□ -0.41
TMEM258-204ENST00000537328 C19orf71A6NCJ1 209 aa12.51□□□□□ -0.41
TMEM258-204ENST00000537328 INAFM1C9JVW0 142 aa12.51□□□□□ -0.41
TMEM258-204ENST00000537328 IGLV2-11P01706 119 aa12.51□□□□□ -0.41
TMEM258-204ENST00000537328 AKR1D1P51857 326 aa12.51□□□□□ -0.41
TMEM258-204ENST00000537328 SAMD13Q5VXD3 122 aa12.51□□□□□ -0.41
TMEM258-204ENST00000537328 NDFIP1Q9BT67 221 aa12.51□□□□□ -0.41
TMEM258-204ENST00000537328 KLK15Q9H2R5 256 aa12.51□□□□□ -0.41
TMEM258-204ENST00000537328 CD5LO43866 347 aa12.5□□□□□ -0.41
TMEM258-204ENST00000537328 CDX1P47902 265 aaPredicted RBP12.5□□□□□ -0.41
TMEM258-204ENST00000537328 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
TMEM258-204ENST00000537328 ATP5L2Q7Z4Y8 100 aa12.5□□□□□ -0.41
TMEM258-204ENST00000537328 GPHB5Q86YW7 130 aa12.5□□□□□ -0.41
TMEM258-204ENST00000537328 Q8N2B8 174 aa12.5□□□□□ -0.41
TMEM258-204ENST00000537328 UFC1Q9Y3C8 167 aa12.5□□□□□ -0.41
TMEM258-204ENST00000537328 HIVEP2P31629 2446 aa12.5□□□□□ -0.41
TMEM258-204ENST00000537328 IGHV3OR16-8A0A075B7F1 116 aa12.49□□□□□ -0.41
TMEM258-204ENST00000537328 CHEK1O14757 476 aa12.49□□□□□ -0.41
TMEM258-204ENST00000537328 IGHV3-11P01762 117 aa12.49□□□□□ -0.41
TMEM258-204ENST00000537328 LCN12Q6JVE5 192 aa12.49□□□□□ -0.41
TMEM258-204ENST00000537328 COX8CQ7Z4L0 72 aa12.49□□□□□ -0.41
TMEM258-204ENST00000537328 SIGLECL1Q8N7X8 197 aa12.49□□□□□ -0.41
TMEM258-204ENST00000537328 SGK494Q96LW2 274 aa12.49□□□□□ -0.41
TMEM258-204ENST00000537328 ZNF702PQ9H963 129 aa12.49□□□□□ -0.41
TMEM258-204ENST00000537328 CR1P17927 2039 aa12.49□□□□□ -0.41
TMEM258-204ENST00000537328 FN1P02751 2386 aaKnown RBP12.48□□□□□ -0.41
TMEM258-204ENST00000537328 ABCA1O95477 2261 aa12.48□□□□□ -0.41
TMEM258-204ENST00000537328 XKRY2A2RUG3 117 aa12.48□□□□□ -0.41
TMEM258-204ENST00000537328 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
TMEM258-204ENST00000537328 M0R3E3 92 aa12.48□□□□□ -0.41
TMEM258-204ENST00000537328 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
TMEM258-204ENST00000537328 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
TMEM258-204ENST00000537328 GLMPQ8WWB7 406 aa12.48□□□□□ -0.41
TMEM258-204ENST00000537328 DAZ1Q9NQZ3 744 aaKnown RBP12.48□□□□□ -0.41
TMEM258-204ENST00000537328 TRAV8-1A0A0A6YYK1 113 aa12.47□□□□□ -0.41
TMEM258-204ENST00000537328 S100A2P29034 98 aa12.47□□□□□ -0.41
TMEM258-204ENST00000537328 COA6Q5JTJ3 125 aaKnown RBP12.47□□□□□ -0.41
TMEM258-204ENST00000537328 RNF152Q8N8N0 203 aa12.47□□□□□ -0.41
TMEM258-204ENST00000537328 UBE2E2Q96LR5 201 aa12.47□□□□□ -0.41
TMEM258-204ENST00000537328 TLN2Q9Y4G6 2542 aa12.47□□□□□ -0.41
TMEM258-204ENST00000537328 IGHV7-4-1A0A0J9YVY3 117 aa12.46□□□□□ -0.41
TMEM258-204ENST00000537328 SNURFLB1AK76 121 aa12.46□□□□□ -0.41
TMEM258-204ENST00000537328 ZNF207O43670 478 aaKnown RBP12.46□□□□□ -0.41
TMEM258-204ENST00000537328 TRBV12-3P01733 135 aa12.46□□□□□ -0.41
TMEM258-204ENST00000537328 TCL1AP56279 114 aa12.46□□□□□ -0.41
TMEM258-204ENST00000537328 RPS20P60866 119 aaKnown RBP12.46□□□□□ -0.41
TMEM258-204ENST00000537328 Q6AWC8 147 aa12.46□□□□□ -0.41
TMEM258-204ENST00000537328 C16orf92Q96LL3 132 aa12.46□□□□□ -0.41
TMEM258-204ENST00000537328 MRPL18Q9H0U6 180 aaKnown RBP12.46□□□□□ -0.41
TMEM258-204ENST00000537328 ZANQ9Y493 2812 aa12.46□□□□□ -0.42
TMEM258-204ENST00000537328 IGHV3-66A0A0C4DH42 116 aa12.45□□□□□ -0.42
TMEM258-204ENST00000537328 APOHP02749 345 aaPredicted RBP12.45□□□□□ -0.42
TMEM258-204ENST00000537328 LGALS1P09382 135 aaKnown RBP12.45□□□□□ -0.42
TMEM258-204ENST00000537328 RBPMS2Q6ZRY4 209 aaKnown RBP12.45□□□□□ -0.42
TMEM258-204ENST00000537328 C8orf86Q6ZUL3 223 aa12.45□□□□□ -0.42
TMEM258-204ENST00000537328 NUP35Q8NFH5 326 aa12.45□□□□□ -0.42
TMEM258-204ENST00000537328 OR2D3Q8NGH3 330 aa12.45□□□□□ -0.42
TMEM258-204ENST00000537328 MYOZ3Q8TDC0 251 aa12.45□□□□□ -0.42
TMEM258-204ENST00000537328 NEU1Q99519 415 aa12.45□□□□□ -0.42
TMEM258-204ENST00000537328 A0A1B0GW15 77 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 HIGD1CA8MV81 97 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 FOXA3P55318 350 aaPredicted RBP12.44□□□□□ -0.42
TMEM258-204ENST00000537328 SRSF2Q01130 221 aaKnown RBP12.44□□□□□ -0.42
TMEM258-204ENST00000537328 TMEM95Q3KNT9 176 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 SMUG1Q53HV7 270 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 UNQ9165/PRO28630Q6UXU0 137 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 PRIMA1Q86XR5 153 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 ZC2HC1AQ96GY0 325 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 PRR25Q96S07 402 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 TMEM160Q9NX00 188 aa12.44□□□□□ -0.42
TMEM258-204ENST00000537328 PPP1R14DQ9NXH3 145 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms