RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MORN3Q6PF18 240 aaPredicted RBP4.35□□□□□ -1.71
PTPRD-213ENST00000537002 TMEM14BQ9NUH8 114 aa4.35□□□□□ -1.71
PTPRD-213ENST00000537002 ATP5G1P05496 136 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 Q6ZPA2 131 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 IGLL5B9A064 214 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 SS18L1O75177 396 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-213ENST00000537002 C12orf74Q32Q52 190 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 VWCEQ96DN2 955 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 C8orf49Q96NF6 230 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 ZNF407Q9C0G0 2248 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 IGKV3-20P01619 116 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 FAM159AQ6UWV7 190 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-213ENST00000537002 H3BMM0 161 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 OR11H6Q8NGC7 330 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 UBE2WQ96B02 151 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 C21orf62Q9NYP8 219 aa4.34□□□□□ -1.71
PTPRD-213ENST00000537002 PINLYPA6NC86 204 aa4.34□□□□□ -1.72
PTPRD-213ENST00000537002 FCN3O75636 299 aa4.34□□□□□ -1.72
PTPRD-213ENST00000537002 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.72
PTPRD-213ENST00000537002 C3orf36Q3SXR2 165 aa4.34□□□□□ -1.72
PTPRD-213ENST00000537002 LTAP01374 205 aa4.34□□□□□ -1.72
PTPRD-213ENST00000537002 CD3EP07766 207 aa4.34□□□□□ -1.72
PTPRD-213ENST00000537002 SLC25A16P16260 332 aa4.34□□□□□ -1.72
PTPRD-213ENST00000537002 IGHV1-2P23083 117 aa4.34□□□□□ -1.72
PTPRD-213ENST00000537002 ATP1A1-AS1Q5TC04 95 aa4.34□□□□□ -1.72
PTPRD-213ENST00000537002 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.72
PTPRD-213ENST00000537002 A0A1W2PR77 199 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 NPYP01303 97 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 PRR30Q53SZ7 412 aaPredicted RBP4.33□□□□□ -1.72
PTPRD-213ENST00000537002 PVRIGQ6DKI7 326 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 Q6ZUT4 128 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 C3orf56Q8N813 242 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 MYO7AQ13402 2215 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 NPFFO15130 113 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 RNASE2P10153 161 aaKnown RBP4.33□□□□□ -1.72
PTPRD-213ENST00000537002 WFDC2Q14508 124 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 FAM104BQ5XKR9 115 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 TMEM14CQ9P0S9 112 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 MYMXA0A1B0GTQ4 84 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 UBE2L6O14933 153 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 CEACAM4O75871 244 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 TTTY13Q9BZ97 58 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 CENPVL3A0A0U1RRI6 287 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 C19orf71A6NCJ1 209 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 SRD5A1P18405 259 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 HEATR1Q9H583 2144 aaKnown RBP4.33□□□□□ -1.72
PTPRD-213ENST00000537002 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 RNF182Q8N6D2 247 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 MLST8Q9BVC4 326 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 YAE1D1Q9NRH1 226 aa4.33□□□□□ -1.72
PTPRD-213ENST00000537002 COX6B1P14854 86 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 MRPL51Q4U2R6 128 aaKnown RBP4.32□□□□□ -1.72
PTPRD-213ENST00000537002 C15orf53Q8NAA6 179 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 LINC00312Q9Y6C7 94 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 PTPRZ1P23471 2315 aaPredicted RBP4.32□□□□□ -1.72
PTPRD-213ENST00000537002 SRRM4A7MD48 611 aaKnown RBP4.32□□□□□ -1.72
PTPRD-213ENST00000537002 TM4SF5O14894 197 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 CD28P10747 220 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 PDE6HQ13956 83 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 LY6DQ14210 128 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 PMVKQ15126 192 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 GGNQ86UU5 652 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 NTN5Q8WTR8 489 aaPredicted RBP4.32□□□□□ -1.72
PTPRD-213ENST00000537002 TMEM101Q96IK0 257 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 MRPL35Q9NZE8 188 aaKnown RBP4.32□□□□□ -1.72
PTPRD-213ENST00000537002 NDUFS7O75251 213 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 CLEC19AQ6UXS0 136 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 Q6ZT83 130 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 RNF183Q96D59 192 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 IGHV3OR16-12A0A075B7B8 117 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 TRAV21A0A0B4J279 112 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 C16orf97H3BN30 126 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 SLC25A20O43772 301 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 FXYD2P54710 66 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 TMEM75Q8N9X5 138 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 EEF1AKMT3Q96AZ1 226 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 TRGV9Q99603 122 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 SLC25A15Q9Y619 301 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 EXPH5Q8NEV8 1989 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 CFHR1Q03591 330 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 TNFRSF18Q9Y5U5 241 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 U3KQK5 164 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 LTBP2Q14767 1821 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 HERV-K104P63124 156 aa4.32□□□□□ -1.72
PTPRD-213ENST00000537002 DAZAP2Q15038 168 aaPredicted RBP4.32□□□□□ -1.72
PTPRD-213ENST00000537002 ZNF474Q6S9Z5 364 aaPredicted RBP4.32□□□□□ -1.72
PTPRD-213ENST00000537002 PRSS29PA6NIE9 313 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 FAM106CPP0CH98 169 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 ERCC8Q13216 396 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 THAP8Q8NA92 274 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 TMEM133Q9H2Q1 129 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 Q8N8P6 123 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 IGKV1-16P04430 117 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 CD59P13987 128 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 MYCNOSP40205 109 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 MRPL14Q6P1L8 145 aaKnown RBP4.31□□□□□ -1.72
PTPRD-213ENST00000537002 ZNRD1Q9P1U0 126 aa4.31□□□□□ -1.72
PTPRD-213ENST00000537002 IMMP1LQ96LU5 166 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms