RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 DKK2Q9UBU2 259 aa10.19□□□□□ -0.78
UBE3B-206ENST00000536398 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
UBE3B-206ENST00000536398 BIRC6Q9NR09 4857 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 NDUFB4O95168 129 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 AMBPP02760 352 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 SPART-AS1P0CW21 52 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 AZU1P20160 251 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 RPL12P30050 165 aaKnown RBP10.18□□□□□ -0.78
UBE3B-206ENST00000536398 RRN3P1Q2M238 152 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 RPP25LQ8N5L8 163 aaKnown RBP10.18□□□□□ -0.78
UBE3B-206ENST00000536398 FAM167A-AS1Q96KT0 104 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 ATP5SQ99766 215 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 PPP1R14DQ9NXH3 145 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 TMEM14CQ9P0S9 112 aa10.18□□□□□ -0.78
UBE3B-206ENST00000536398 YTHDF2Q9Y5A9 579 aaKnown RBP10.18□□□□□ -0.78
UBE3B-206ENST00000536398 TRBV19A0A075B6N1 114 aa10.17□□□□□ -0.78
UBE3B-206ENST00000536398 IGHV4-4A0A075B6R2 117 aa10.17□□□□□ -0.78
UBE3B-206ENST00000536398 TMEM189A5PLL7 270 aa10.17□□□□□ -0.78
UBE3B-206ENST00000536398 PTTG1O95997 202 aa10.17□□□□□ -0.78
UBE3B-206ENST00000536398 HIST1H1EP10412 219 aaKnown RBP10.17□□□□□ -0.78
UBE3B-206ENST00000536398 FCN2Q15485 313 aa10.17□□□□□ -0.78
UBE3B-206ENST00000536398 GUK1Q16774 197 aa10.17□□□□□ -0.78
UBE3B-206ENST00000536398 LGALS9CQ6DKI2 356 aa10.17□□□□□ -0.78
UBE3B-206ENST00000536398 BLNKQ8WV28 456 aa10.17□□□□□ -0.78
UBE3B-206ENST00000536398 M0R3E3 92 aa10.16□□□□□ -0.78
UBE3B-206ENST00000536398 EIF3GO75821 320 aaKnown RBP eCLIP10.16□□□□□ -0.78
UBE3B-206ENST00000536398 CT45A10P0DMU9 189 aa10.16□□□□□ -0.78
UBE3B-206ENST00000536398 EXOC3-AS1Q8N2X6 119 aa10.16□□□□□ -0.78
UBE3B-206ENST00000536398 OR10J6PQ8NGY7 276 aa10.16□□□□□ -0.78
UBE3B-206ENST00000536398 LINC01587Q99440 93 aa10.16□□□□□ -0.78
UBE3B-206ENST00000536398 DNAH6Q9C0G6 4158 aa10.15□□□□□ -0.78
UBE3B-206ENST00000536398 J3KRW8 73 aa10.15□□□□□ -0.78
UBE3B-206ENST00000536398 PET100P0DJ07 73 aa10.15□□□□□ -0.78
UBE3B-206ENST00000536398 CDKN1BP46527 198 aa10.15□□□□□ -0.78
UBE3B-206ENST00000536398 ERCC8Q13216 396 aa10.15□□□□□ -0.78
UBE3B-206ENST00000536398 Q5BKY6 102 aa10.15□□□□□ -0.78
UBE3B-206ENST00000536398 NIPSNAP3BQ9BS92 247 aa10.15□□□□□ -0.78
UBE3B-206ENST00000536398 TIMM9Q9Y5J7 89 aa10.15□□□□□ -0.78
UBE3B-206ENST00000536398 PLAC8L1A1L4L8 177 aa10.14□□□□□ -0.79
UBE3B-206ENST00000536398 ZNF253O75346 499 aa10.14□□□□□ -0.79
UBE3B-206ENST00000536398 HTN1P15515 57 aa10.14□□□□□ -0.79
UBE3B-206ENST00000536398 FFAR4Q5NUL3 377 aa10.14□□□□□ -0.79
UBE3B-206ENST00000536398 FXYD5Q96DB9 178 aa10.14□□□□□ -0.79
UBE3B-206ENST00000536398 MED28Q9H204 178 aa10.14□□□□□ -0.79
UBE3B-206ENST00000536398 OR51M1Q9H341 326 aa10.14□□□□□ -0.79
UBE3B-206ENST00000536398 FUT9Q9Y231 359 aa10.14□□□□□ -0.79
UBE3B-206ENST00000536398 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
UBE3B-206ENST00000536398 FRAS1Q86XX4 4008 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 DNAH10Q8IVF4 4471 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 NPIPB6E9PJ23 425 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 C17orf112F2Z3M2 114 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 IFNA5P01569 189 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 OR10J4P0C629 311 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 HTN3P15516 51 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 TCTAP57738 103 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 ICAM4Q14773 271 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 GFI1BQ5VTD9 330 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 SCGB1C1Q8TD33 95 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 ZNF503Q96F45 646 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
UBE3B-206ENST00000536398 NBEAP1P0C6P0 100 aa10.12□□□□□ -0.79
UBE3B-206ENST00000536398 TAS2R60P59551 318 aa10.12□□□□□ -0.79
UBE3B-206ENST00000536398 RNF141Q8WVD5 230 aa10.12□□□□□ -0.79
UBE3B-206ENST00000536398 MRPL53Q96EL3 112 aaKnown RBP10.12□□□□□ -0.79
UBE3B-206ENST00000536398 PAXXQ9BUH6 204 aa10.12□□□□□ -0.79
UBE3B-206ENST00000536398 MRPL32Q9BYC8 188 aaKnown RBP10.12□□□□□ -0.79
UBE3B-206ENST00000536398 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
UBE3B-206ENST00000536398 TRAV12-3A0A0B4J271 114 aa10.11□□□□□ -0.79
UBE3B-206ENST00000536398 DAD1P61803 113 aa10.11□□□□□ -0.79
UBE3B-206ENST00000536398 PDE6HQ13956 83 aa10.11□□□□□ -0.79
UBE3B-206ENST00000536398 OXA1LQ15070 435 aa10.11□□□□□ -0.79
UBE3B-206ENST00000536398 FAM122CQ6P4D5 195 aa10.11□□□□□ -0.79
UBE3B-206ENST00000536398 TMEM256Q8N2U0 113 aa10.11□□□□□ -0.79
UBE3B-206ENST00000536398 PHYHIPLQ96FC7 376 aa10.11□□□□□ -0.79
UBE3B-206ENST00000536398 AGPAT4-IT1Q9H0P7 198 aa10.11□□□□□ -0.79
UBE3B-206ENST00000536398 IGKV2-40A0A087WW87 121 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-206ENST00000536398 TEX48A0A1B0GUV7 120 aa10.1□□□□□ -0.79
UBE3B-206ENST00000536398 OR7C2O60412 319 aa10.1□□□□□ -0.79
UBE3B-206ENST00000536398 IGKV2D-40P01614 121 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-206ENST00000536398 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
UBE3B-206ENST00000536398 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
UBE3B-206ENST00000536398 TSPOP30536 169 aa10.1□□□□□ -0.79
UBE3B-206ENST00000536398 VGLL1Q99990 258 aa10.1□□□□□ -0.79
UBE3B-206ENST00000536398 PRELID1Q9Y255 219 aa10.1□□□□□ -0.79
UBE3B-206ENST00000536398 H7BYZ3 331 aa10.09□□□□□ -0.79
UBE3B-206ENST00000536398 LEPP41159 167 aa10.09□□□□□ -0.79
UBE3B-206ENST00000536398 RANP62826 216 aaKnown RBP10.09□□□□□ -0.79
UBE3B-206ENST00000536398 CD300CQ08708 224 aa10.09□□□□□ -0.79
UBE3B-206ENST00000536398 RNASE8Q8TDE3 154 aaKnown RBP10.09□□□□□ -0.79
UBE3B-206ENST00000536398 FAM19A4Q96LR4 140 aa10.09□□□□□ -0.79
UBE3B-206ENST00000536398 ODF3Q96PU9 254 aa10.09□□□□□ -0.79
UBE3B-206ENST00000536398 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
UBE3B-206ENST00000536398 AAMDCQ9H7C9 122 aa10.09□□□□□ -0.79
UBE3B-206ENST00000536398 LYRM9A8MSI8 78 aa10.08□□□□□ -0.8
UBE3B-206ENST00000536398 RAB2AP61019 212 aa10.08□□□□□ -0.8
UBE3B-206ENST00000536398 BTN1A1Q13410 526 aa10.08□□□□□ -0.8
UBE3B-206ENST00000536398 Q6ZQT7 251 aa10.08□□□□□ -0.8
UBE3B-206ENST00000536398 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
UBE3B-206ENST00000536398 C16orf74Q96GX8 76 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms