RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SPANXN5Q5MJ07 72 aa7.77□□□□□ -1.17
CLSTN3-206ENST00000535668 SSX7Q7RTT5 188 aa7.77□□□□□ -1.17
CLSTN3-206ENST00000535668 ZNF738Q8NE65 137 aa7.77□□□□□ -1.17
CLSTN3-206ENST00000535668 RPUSD4Q96CM3 377 aaKnown RBP7.77□□□□□ -1.17
CLSTN3-206ENST00000535668 SAT2Q96F10 170 aaPredicted RBP7.77□□□□□ -1.17
CLSTN3-206ENST00000535668 LINC01587Q99440 93 aa7.77□□□□□ -1.17
CLSTN3-206ENST00000535668 KRTAP1-5Q9BYS1 174 aa7.77□□□□□ -1.17
CLSTN3-206ENST00000535668 TRAV12-2A0A075B6T6 113 aa7.76□□□□□ -1.17
CLSTN3-206ENST00000535668 ZNF253O75346 499 aa7.76□□□□□ -1.17
CLSTN3-206ENST00000535668 GIPP09681 153 aaPredicted RBP7.76□□□□□ -1.17
CLSTN3-206ENST00000535668 VAMP1P23763 118 aa7.76□□□□□ -1.17
CLSTN3-206ENST00000535668 TEPPQ6URK8 271 aa7.76□□□□□ -1.17
CLSTN3-206ENST00000535668 TMED4Q7Z7H5 227 aa7.76□□□□□ -1.17
CLSTN3-206ENST00000535668 MAPKAPK5-AS1Q8N8E1 139 aa7.76□□□□□ -1.17
CLSTN3-206ENST00000535668 MRPS16Q9Y3D3 137 aaKnown RBP7.76□□□□□ -1.17
CLSTN3-206ENST00000535668 C9orf170A2RU37 121 aa7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 SSNA1O43805 119 aa7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 IGLC2P0DOY2 106 aa7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 HIST1H1AQ02539 215 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 FGL1Q08830 312 aa7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 FCN2Q15485 313 aa7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 GUK1Q16774 197 aa7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 IGFL4Q6B9Z1 124 aa7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 Q6ZRN7 208 aaPredicted RBP7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 ARV1Q9H2C2 271 aa7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 PXMP4Q9Y6I8 212 aa7.75□□□□□ -1.17
CLSTN3-206ENST00000535668 FAT1Q14517 4588 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 TRAV6A0A075B6T7 132 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 HMSDA8MTL9 139 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 K7EP13 123 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 NUDT3O95989 172 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 NMBP08949 121 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 HOXB5P09067 269 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 ESRGQ1W209 222 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 ZNF546Q86UE3 836 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 BPIFA4PQ86YQ2 179 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 OR10P1Q8NGE3 313 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 GNPNAT1Q96EK6 184 aaPredicted RBP7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 MRPL53Q96EL3 112 aaKnown RBP7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 UHRF2Q96PU4 802 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 PYGO2Q9BRQ0 406 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 NOP10Q9NPE3 64 aaKnown RBP7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 PSENENQ9NZ42 101 aa7.74□□□□□ -1.17
CLSTN3-206ENST00000535668 TRAV26-1A0A087WT03 109 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 NPIPB6E9PJ23 425 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 H3BP45 60 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 HOXA5P20719 270 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 RHOBP62745 196 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 CD300CQ08708 224 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 CLINT1Q14677 625 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 ANXA2RQ3ZCQ2 193 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 GFI1BQ5VTD9 330 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 CDPF1Q6NVV7 123 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 SPATA12Q7Z6I5 190 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 ZNF431Q8TF32 576 aaPredicted RBP7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 TMEM37Q8WXS4 190 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 FAM19A4Q96LR4 140 aa7.73□□□□□ -1.17
CLSTN3-206ENST00000535668 KLLNB2CW77 178 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 AGPAT2O15120 278 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 OR5G3P0C626 314 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 KRTAP10-2P60368 255 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 CYCSP99999 105 aaKnown RBP7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 LINC00305Q7Z4B0 112 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 CCDC28AQ8IWP9 274 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 C11orf72Q8NBR9 251 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 MITD1Q8WV92 249 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 ARL6Q9H0F7 186 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 PGPEP1Q9NXJ5 209 aa7.72□□□□□ -1.17
CLSTN3-206ENST00000535668 TRBV7-9A0A0J9YWB2 115 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 ATP6V1G1O75348 118 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 ZNF324O75467 553 aaPredicted RBP7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 IFNA7P01567 189 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 RLN2P04090 185 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 OR4E1P0C645 316 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 CRISP2P16562 243 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 PDE6HQ13956 83 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 KIR3DS1Q14943 382 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 VWC2Q2TAL6 325 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 ZNF680Q8NEM1 530 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 LRRC20Q8TCA0 184 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 VSIG2Q96IQ7 327 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 DNAJC4Q9NNZ3 241 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 SCRT2Q9NQ03 307 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 PPP1R14DQ9NXH3 145 aa7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 RCL1Q9Y2P8 373 aaKnown RBP7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 SRRM2Q9UQ35 2752 aaKnown RBP7.71□□□□□ -1.18
CLSTN3-206ENST00000535668 A0A096LPF7 62 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 PRAC2D3DTV9 90 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 H3BQ15 152 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 GOSR2O14653 212 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 SLC25A5P05141 298 aaKnown RBP7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 METTL15P1P0C7V9 234 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 CT45A10P0DMU9 189 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 LEPP41159 167 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 IFITM2Q01629 132 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 ARL16Q0P5N6 197 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 OPCMLQ14982 345 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 IBA57Q5T440 356 aaKnown RBP7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 C12orf45Q8N5I9 185 aaPredicted RBP7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 MGST2Q99735 147 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms