RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RAB40CQ96S21 281 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 FBXL7Q9UJT9 491 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 S4R3C0 116 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 A0A1B0GV50 99 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 A0A1B0GV72 72 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 IZUMO1RA6ND01 250 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 FAM24AA6NFZ4 105 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 C3orf84H3BNL1 204 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 RBFOX2O43251 390 aaKnown RBP eCLIP6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 S1PR2O95136 353 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 SMIM17P0DL12 118 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 DEFA4P12838 97 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 CRISP2P16562 243 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 RHOBP62745 196 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 CLEC19AQ6UXS0 136 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 ZNF709Q8N972 641 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 VN1R17PQ8TDU5 208 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 TMEM222Q9H0R3 208 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 RPRMQ9NS64 109 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 C19orf73Q9NVV2 129 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 SIGLEC8Q9NYZ4 499 aa6.48□□□□□ -1.37
SFSWAP-202ENST00000535202 TRAV3A0A0B4J244 114 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 ZNF320A2RRD8 509 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 ZFP92A6NM28 416 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 A8MZ25 164 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 UPK2O00526 184 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 PDE6DO43924 150 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 GPX1P07203 203 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 CRYGCP07315 174 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 EDN2P20800 178 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 ARL3P36405 182 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 VAMP3Q15836 100 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 TDRG1Q3Y452 100 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 CST9LP1Q5W188 147 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 MTURNQ8N3F0 131 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 OR2K2Q8NGT1 345 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 MUC7Q8TAX7 377 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 EEF1AKMT3Q96AZ1 226 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 TM2D3Q9BRN9 247 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 TMEM140Q9NV12 185 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 LY96Q9Y6Y9 160 aa6.47□□□□□ -1.37
SFSWAP-202ENST00000535202 IGLV11-55A0A075B6I3 123 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 TRAV9-2A0A087WT02 112 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 CTXND1A0A1B0GTU2 59 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 C2orf70A6NJV1 201 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 CGB1A6NKQ9 187 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 ERVK-16P61578 105 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 HBG1P69891 147 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 HBG2P69892 147 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 POU2AF1Q16633 256 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 CD300EQ496F6 205 aaPredicted RBP6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 MRPL54Q6P161 138 aaKnown RBP6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 WDR73Q6P4I2 378 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 ADAMTSL5Q6ZMM2 481 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 DEFB125Q8N687 156 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 GNB1LQ9BYB4 327 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 SAMD10Q9BYL1 202 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 COMMD5Q9GZQ3 224 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 PARLQ9H300 379 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 PLEKHA3Q9HB20 300 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 SELENOKQ9Y6D0 94 aa6.46□□□□□ -1.38
SFSWAP-202ENST00000535202 LGALS9O00182 355 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 NUPR1O60356 82 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 PGLYRP1O75594 196 aaPredicted RBP6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 SERF1AO75920 110 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 ADMP35318 185 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 LINC00310P59036 64 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 ZNF726P1Q15940 193 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 DEFB114Q30KQ6 69 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 FAM106AQ4KMX7 169 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 PHLDA2Q53GA4 152 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 NMSQ5H8A3 153 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 CASC10Q5T4H9 136 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 BAGE3Q86Y29 109 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 BAGE2Q86Y30 109 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 OR10W1Q8NGF6 305 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 CACNG8Q8WXS5 425 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 KCNS1Q96KK3 526 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 SPATA25Q9BR10 227 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 SSBP4Q9BWG4 385 aaPredicted RBP6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 QTRT1Q9BXR0 403 aaKnown RBP6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 ST20Q9HBF5 79 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 SLC39A9Q9NUM3 307 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 TP53TG3Q9ULZ0 132 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 OR51B2Q9Y5P1 312 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 RYR3Q15413 4870 aa6.45□□□□□ -1.38
SFSWAP-202ENST00000535202 TRBV7-1A0A0A6YYK4 115 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 C3orf85A0A1B0GTC6 90 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 SSSCA1O60232 199 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 OR7C2O60412 319 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 CLEC3BP05452 202 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 CD7P09564 240 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 CBLN1P23435 193 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 F2RP25116 425 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 GPR183P32249 361 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 G6PCP35575 357 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 KLK9Q2XQG4 91 aa6.44□□□□□ -1.38
SFSWAP-202ENST00000535202 FAM162BQ5T6X4 162 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms