RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 KRTAP1-5Q9BYS1 174 aa11.7□□□□□ -0.54
CAPRIN1-216ENST00000534042 RCL1Q9Y2P8 373 aaKnown RBP11.7□□□□□ -0.54
CAPRIN1-216ENST00000534042 HSPG2P98160 4391 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 LINC00854A0A1B0GVQ3 168 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 HOXA5P20719 270 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 OPCMLQ14982 345 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 BAK1Q16611 211 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 ESRGQ1W209 222 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 MORN5Q5VZ52 161 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 MGST2Q99735 147 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 UPK3BQ9BT76 320 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 Q9H3A6 140 aa11.69□□□□□ -0.54
CAPRIN1-216ENST00000534042 TRAV12-3A0A0B4J271 114 aa11.68□□□□□ -0.54
CAPRIN1-216ENST00000534042 A0A1W2PPQ1 181 aa11.68□□□□□ -0.54
CAPRIN1-216ENST00000534042 C7orf66A4D0T2 115 aa11.68□□□□□ -0.54
CAPRIN1-216ENST00000534042 H3BNG1 76 aa11.68□□□□□ -0.54
CAPRIN1-216ENST00000534042 IGLC2P0DOY2 106 aa11.68□□□□□ -0.54
CAPRIN1-216ENST00000534042 LEPP41159 167 aa11.68□□□□□ -0.54
CAPRIN1-216ENST00000534042 SAT2Q96F10 170 aaPredicted RBP11.68□□□□□ -0.54
CAPRIN1-216ENST00000534042 ODF3Q96PU9 254 aa11.68□□□□□ -0.54
CAPRIN1-216ENST00000534042 DNAJC4Q9NNZ3 241 aa11.68□□□□□ -0.54
CAPRIN1-216ENST00000534042 CENPXA8MT69 81 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 H3BQ15 152 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 L7N2F9 121 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 MBPP02686 304 aaPredicted RBP11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 CT45A10P0DMU9 189 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 VAMP2P63027 116 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 RAB31Q13636 194 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 Q6ZRG5 221 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 Q8N1X5 172 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 MITD1Q8WV92 249 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 PYGO2Q9BRQ0 406 aa11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 MRPS16Q9Y3D3 137 aaKnown RBP11.67□□□□□ -0.54
CAPRIN1-216ENST00000534042 BTF3P20290 206 aaKnown RBP11.66□□□□□ -0.54
CAPRIN1-216ENST00000534042 CAMLGP49069 296 aa11.66□□□□□ -0.54
CAPRIN1-216ENST00000534042 DAZ2Q13117 558 aaKnown RBP11.66□□□□□ -0.54
CAPRIN1-216ENST00000534042 GUK1Q16774 197 aa11.66□□□□□ -0.54
CAPRIN1-216ENST00000534042 ZNF431Q8TF32 576 aaPredicted RBP11.66□□□□□ -0.54
CAPRIN1-216ENST00000534042 TMPRSS5Q9H3S3 457 aa11.66□□□□□ -0.54
CAPRIN1-216ENST00000534042 ZNF586Q9NXT0 402 aa11.66□□□□□ -0.54
CAPRIN1-216ENST00000534042 TRAV5A0A0B4J249 113 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 NPIPB6E9PJ23 425 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 BTCP35070 178 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 BCAP31P51572 246 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 KRTAP10-2P60368 255 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 ZNF846Q147U1 533 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 MIC13Q5XKP0 118 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 Q6ZTI0 123 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 NRARPQ7Z6K4 114 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 OR1L4Q8NGR5 311 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 SCRT2Q9NQ03 307 aa11.65□□□□□ -0.54
CAPRIN1-216ENST00000534042 CNPY1Q3B7I2 92 aa11.64□□□□□ -0.55
CAPRIN1-216ENST00000534042 PFDN5Q99471 154 aa11.64□□□□□ -0.55
CAPRIN1-216ENST00000534042 LSM5Q9Y4Y9 91 aaKnown RBP11.64□□□□□ -0.55
CAPRIN1-216ENST00000534042 LRP1BQ9NZR2 4599 aa11.64□□□□□ -0.55
CAPRIN1-216ENST00000534042 TRGV2A0A075B6R0 118 aa11.63□□□□□ -0.55
CAPRIN1-216ENST00000534042 C7orf71A4D174 169 aa11.63□□□□□ -0.55
CAPRIN1-216ENST00000534042 CCSO14618 274 aa11.63□□□□□ -0.55
CAPRIN1-216ENST00000534042 SLC25A5P05141 298 aaKnown RBP11.63□□□□□ -0.55
CAPRIN1-216ENST00000534042 CAV2P51636 162 aa11.63□□□□□ -0.55
CAPRIN1-216ENST00000534042 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
CAPRIN1-216ENST00000534042 SDHCQ99643 169 aaPredicted RBP11.63□□□□□ -0.55
CAPRIN1-216ENST00000534042 GSN-AS1Q9NRJ2 163 aa11.63□□□□□ -0.55
CAPRIN1-216ENST00000534042 A0A096LPF7 62 aa11.62□□□□□ -0.55
CAPRIN1-216ENST00000534042 FAM25EA8MYX2 175 aa11.62□□□□□ -0.55
CAPRIN1-216ENST00000534042 ZNF253O75346 499 aa11.62□□□□□ -0.55
CAPRIN1-216ENST00000534042 CST7O76096 145 aa11.62□□□□□ -0.55
CAPRIN1-216ENST00000534042 C12orf45Q8N5I9 185 aaPredicted RBP11.62□□□□□ -0.55
CAPRIN1-216ENST00000534042 ZNF680Q8NEM1 530 aa11.62□□□□□ -0.55
CAPRIN1-216ENST00000534042 MRPL53Q96EL3 112 aaKnown RBP11.62□□□□□ -0.55
CAPRIN1-216ENST00000534042 UQCC1Q9NVA1 299 aa11.62□□□□□ -0.55
CAPRIN1-216ENST00000534042 WDR83OSQ9Y284 106 aa11.62□□□□□ -0.55
CAPRIN1-216ENST00000534042 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
CAPRIN1-216ENST00000534042 FAM24AA6NFZ4 105 aa11.61□□□□□ -0.55
CAPRIN1-216ENST00000534042 ERCC8Q13216 396 aa11.61□□□□□ -0.55
CAPRIN1-216ENST00000534042 C18orf15Q96N68 181 aa11.61□□□□□ -0.55
CAPRIN1-216ENST00000534042 RBM38Q9H0Z9 239 aaKnown RBP11.61□□□□□ -0.55
CAPRIN1-216ENST00000534042 C20orf85Q9H1P6 137 aa11.61□□□□□ -0.55
CAPRIN1-216ENST00000534042 SLC39A9Q9NUM3 307 aa11.61□□□□□ -0.55
CAPRIN1-216ENST00000534042 FUT9Q9Y231 359 aa11.61□□□□□ -0.55
CAPRIN1-216ENST00000534042 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 C5orf51A6NDU8 294 aa11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 M0R3E3 92 aa11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 IL7P13232 177 aa11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 RPL29P47914 159 aaKnown RBP11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 LINC00315P59091 139 aa11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 EIF4E3Q8N5X7 224 aaKnown RBP11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 C11orf72Q8NBR9 251 aa11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 LINC00477Q96M19 166 aa11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 PRELID1Q9Y255 219 aa11.6□□□□□ -0.55
CAPRIN1-216ENST00000534042 KLLNB2CW77 178 aa11.59□□□□□ -0.55
CAPRIN1-216ENST00000534042 SIVA1O15304 175 aa11.59□□□□□ -0.55
CAPRIN1-216ENST00000534042 HIST1H1EP10412 219 aaKnown RBP11.59□□□□□ -0.55
CAPRIN1-216ENST00000534042 PVALBP20472 110 aaPredicted RBP11.59□□□□□ -0.55
CAPRIN1-216ENST00000534042 RNASE4P34096 147 aaKnown RBP11.59□□□□□ -0.55
CAPRIN1-216ENST00000534042 BAXQ07812 192 aa11.59□□□□□ -0.55
CAPRIN1-216ENST00000534042 CD300CQ08708 224 aa11.59□□□□□ -0.55
CAPRIN1-216ENST00000534042 VWC2Q2TAL6 325 aa11.59□□□□□ -0.55
CAPRIN1-216ENST00000534042 ANXA2RQ3ZCQ2 193 aa11.59□□□□□ -0.55
CAPRIN1-216ENST00000534042 LINC00467Q9BRT7 94 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 704.1 ms