RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 LIMD2Q9BT23 127 aa-0.12□□□□□ -2.43
ATM-220ENST00000533526 PARVGQ9HBI0 331 aa-0.12□□□□□ -2.43
ATM-220ENST00000533526 SLC22A13Q9Y226 551 aa-0.12□□□□□ -2.43
ATM-220ENST00000533526 CEP164Q9UPV0 1460 aa-0.12□□□□□ -2.43
ATM-220ENST00000533526 RREB1Q92766 1687 aa-0.12□□□□□ -2.43
ATM-220ENST00000533526 DLEC1Q9Y238 1755 aa-0.12□□□□□ -2.43
ATM-220ENST00000533526 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.12□□□□□ -2.43
ATM-220ENST00000533526 MYH9P35579 1960 aaKnown RBP-0.12□□□□□ -2.43
ATM-220ENST00000533526 WNK2Q9Y3S1 2297 aa-0.12□□□□□ -2.43
ATM-220ENST00000533526 LRP5O75197 1615 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 MYH6P13533 1939 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 MYH13Q9UKX3 1938 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 F5P12259 2224 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 LRP1BQ9NZR2 4599 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 POLQO75417 2590 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 ABCA4P78363 2273 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 LPAP08519 4548 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 A0A096LPI6 279 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 TMEM114B3SHH9 223 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 K7ERJ3 54 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 LY6G6CO95867 125 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 IGHV3-33P01772 117 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 IFNA4P05014 189 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 KLRD1Q13241 179 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 IFT20Q8IY31 132 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 OR4K15Q8NH41 348 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 ZHX1-C8orf76Q96EF9 292 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 POPDC3Q9HBV1 291 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 FAM32AQ9Y421 112 aaKnown RBP-0.13□□□□□ -2.43
ATM-220ENST00000533526 COL7A1Q02388 2944 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 CELSR2Q9HCU4 2923 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 NISCHQ9Y2I1 1504 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 TTC28Q96AY4 2481 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 ADGRL3Q9HAR2 1447 aa-0.13□□□□□ -2.43
ATM-220ENST00000533526 PRKDCP78527 4128 aaKnown RBP-0.14□□□□□ -2.43
ATM-220ENST00000533526 NCOR1O75376 2440 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 C9orf170A2RU37 121 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 NFYBP25208 207 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 CDKN2CP42773 168 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 RPL37AP61513 92 aaKnown RBP-0.14□□□□□ -2.43
ATM-220ENST00000533526 TAF1AQ15573 450 aaPredicted RBP-0.14□□□□□ -2.43
ATM-220ENST00000533526 C10orf99Q6UWK7 81 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 ZCCHC23Q6ZST2 131 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 C10orf111Q8N326 155 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 RMND5BQ96G75 393 aaPredicted RBP-0.14□□□□□ -2.43
ATM-220ENST00000533526 ZNF714Q96N38 554 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 MAP1LC3BQ9GZQ8 125 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 ENY2Q9NPA8 101 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 ALMS1Q8TCU4 4167 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 ANKRD17O75179 2603 aaKnown RBP-0.14□□□□□ -2.43
ATM-220ENST00000533526 PIEZO1Q92508 2521 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 PIK3C2AO00443 1686 aa-0.14□□□□□ -2.43
ATM-220ENST00000533526 TPRP12270 2363 aaKnown RBP-0.14□□□□□ -2.43
ATM-220ENST00000533526 PHIPQ8WWQ0 1821 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 UBR5O95071 2799 aaPredicted RBP-0.15□□□□□ -2.43
ATM-220ENST00000533526 CACNA1CQ13936 2221 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 LAMC1P11047 1609 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 LYRM1O43325 122 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 BANF1O75531 89 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 CRHP06850 196 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 PDE6GP18545 87 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 ITGB3BPQ13352 177 aaPredicted RBP-0.15□□□□□ -2.43
ATM-220ENST00000533526 AKIRIN2Q53H80 203 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 PPTC7Q8NI37 304 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 DGCR14Q96DF8 476 aaKnown RBP-0.15□□□□□ -2.43
ATM-220ENST00000533526 LPAR5Q9H1C0 372 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 CACYBPQ9HB71 228 aaKnown RBP-0.15□□□□□ -2.43
ATM-220ENST00000533526 SS18L2Q9UHA2 77 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 NCOR2Q9Y618 2525 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 CD109Q6YHK3 1445 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 PTPRZ1P23471 2315 aaPredicted RBP-0.15□□□□□ -2.43
ATM-220ENST00000533526 SSC5DA1L4H1 1573 aa-0.15□□□□□ -2.43
ATM-220ENST00000533526 CDK5RAP2Q96SN8 1893 aa-0.16□□□□□ -2.43
ATM-220ENST00000533526 KDM6BO15054 1643 aa-0.16□□□□□ -2.43
ATM-220ENST00000533526 SIPA1L3O60292 1781 aaPredicted RBP-0.16□□□□□ -2.43
ATM-220ENST00000533526 PBRM1Q86U86 1689 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 TRAV5A0A0B4J249 113 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 A0A0J9YY99 117 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 NBDYA0A0U1RRE5 68 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 DUXBA0A1W2PPF3 345 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 A0A1W2PRS3 328 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 ODAMA1E959 279 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 A6NN06 94 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 H7BYZ3 331 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 CXCL1P09341 107 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 CTXN2P0C2S0 81 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 HSPE1P61604 102 aaKnown RBP-0.16□□□□□ -2.44
ATM-220ENST00000533526 SPINK13Q1W4C9 94 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 STX19Q8N4C7 294 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 PLXNB2O15031 1838 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 ZNF236Q9UL36 1845 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 ZFYVE26Q68DK2 2539 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 KDM5CP41229 1560 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 LAMC3Q9Y6N6 1575 aa-0.16□□□□□ -2.44
ATM-220ENST00000533526 F8P00451 2351 aa-0.17□□□□□ -2.44
ATM-220ENST00000533526 JMJD1CQ15652 2540 aa-0.17□□□□□ -2.44
ATM-220ENST00000533526 CPDO75976 1380 aa-0.17□□□□□ -2.44
ATM-220ENST00000533526 PARP14Q460N5 1801 aa-0.17□□□□□ -2.44
ATM-220ENST00000533526 FOCADQ5VW36 1801 aa-0.17□□□□□ -2.44
ATM-220ENST00000533526 AIPO00170 330 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms