RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 GFRA4Q9GZZ7 299 aa6.45□□□□□ -1.38
CSRP1-218ENST00000533402 RCHY1Q96PM5 261 aa6.45□□□□□ -1.38
CSRP1-218ENST00000533402 SMKR1H3BMG3 65 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 HAMPP81172 84 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 IGHV3-66A0A0C4DH42 116 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 FOXI1Q12951 378 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 TAX1BP3O14907 124 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 TIMM21Q9BVV7 248 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 IGKV1-8A0A0C4DH67 115 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 TMEM42Q69YG0 159 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 TMEM14EPQ6UXP3 125 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 SRSF2Q01130 221 aaKnown RBP6.44□□□□□ -1.38
CSRP1-218ENST00000533402 VWC2Q2TAL6 325 aa6.44□□□□□ -1.38
CSRP1-218ENST00000533402 TRAV41A0A0B4J266 112 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 ITLN1Q8WWA0 313 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 U3KQE9 123 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 IGHV3-49A0A0A0MS15 119 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 FAM90A1Q86YD7 464 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 CREBBPQ92793 2442 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 PEBP1P30086 187 aaKnown RBP6.43□□□□□ -1.38
CSRP1-218ENST00000533402 NDUFV3P56181 108 aaKnown RBP6.43□□□□□ -1.38
CSRP1-218ENST00000533402 TMEM54Q969K7 222 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 TRAV12-1A0A0B4J245 112 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 CD7P09564 240 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 SMIM10L1P0DMW3 83 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 SMIM10Q96HG1 83 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 MSRB2Q9Y3D2 182 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 WNK1Q9H4A3 2382 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 SLC22A18ASQ8N1D0 253 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 FAM90A9PA6NNJ1 464 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 ADAMTS9Q9P2N4 1935 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 CD69Q07108 199 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 TMEM167AQ8TBQ9 72 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 S4R3C0 116 aa6.43□□□□□ -1.38
CSRP1-218ENST00000533402 A0A1W2PPI3 338 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 UPK2O00526 184 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 LYPD6BQ8NI32 183 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 EXPH5Q8NEV8 1989 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 F8WEM9 126 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 LIME1Q9H400 295 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 IGLL5B9A064 214 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 PRB3Q04118 309 aaPredicted RBP6.42□□□□□ -1.38
CSRP1-218ENST00000533402 LINC01560Q8TB33 94 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 LINC01587Q99440 93 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 PRR32B1ATL7 298 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 EXOC3-AS1Q8N2X6 119 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 PRB4P10163 310 aaPredicted RBP6.42□□□□□ -1.38
CSRP1-218ENST00000533402 LTBRP36941 435 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 NSUN5P1Q3KNT7 163 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 IGHV3-23P01764 117 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 SUMO4Q6EEV6 95 aa6.42□□□□□ -1.38
CSRP1-218ENST00000533402 THBDP07204 575 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 GLMPQ8WWB7 406 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 RNF125Q96EQ8 232 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 TNCP24821 2201 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 IGLV3-12A0A075B6K2 115 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 FOXS1O43638 330 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 EFNA4P52798 201 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 LINC01356Q8N9X3 169 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 C21orf62Q9NYP8 219 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 VCYO14598 125 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 CFHR2P36980 270 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 FDCSPQ8NFU4 85 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 MED13LQ71F56 2210 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 A0A1W2PRX2 142 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 CD24P25063 80 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 Q6ZUT4 128 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 SLC50A1Q9BRV3 221 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 V9GYV3 84 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 ARMS2P0C7Q2 107 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 SRSF7Q16629 238 aaKnown RBP eCLIP6.41□□□□□ -1.38
CSRP1-218ENST00000533402 ZC2HC1AQ96GY0 325 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 SPATA25Q9BR10 227 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 SMIM27A0A1W2PRY6 76 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 CYYR1Q96J86 154 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 MED12LQ86YW9 2145 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 IGKV1-9A0A0C4DH69 117 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 RASL10AQ92737 203 aa6.41□□□□□ -1.38
CSRP1-218ENST00000533402 BSPH1Q075Z2 132 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 KLF5Q13887 457 aaPredicted RBP6.4□□□□□ -1.38
CSRP1-218ENST00000533402 PVRIGQ6DKI7 326 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 SLC25A45Q8N413 288 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 ZNRF1Q8ND25 227 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 RPUSD1Q9UJJ7 312 aaKnown RBP6.4□□□□□ -1.38
CSRP1-218ENST00000533402 IGHV3OR16-8A0A075B7F1 116 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 HLA-DRB4P13762 266 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 PRCDQ00LT1 54 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 PCP2Q8IVA1 136 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 PTH2Q96A98 100 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 HLA-DRB4X5D2U9 266 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 TRGV11A0A075B6L2 103 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 EPOPA6NHQ4 379 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 CELA2BP08218 269 aaPredicted RBP6.4□□□□□ -1.38
CSRP1-218ENST00000533402 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.38
CSRP1-218ENST00000533402 C3orf36Q3SXR2 165 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 KLF14Q8TD94 323 aaPredicted RBP6.4□□□□□ -1.38
CSRP1-218ENST00000533402 LINC00527Q9UJ94 153 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 SH2D1AO60880 128 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 LINC00271P0C7V0 271 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms