RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 PMS2P11Q13670 270 aa12.15□□□□□ -0.46
PKP3-209ENST00000533069 SFT2D1Q8WV19 159 aa12.15□□□□□ -0.46
PKP3-209ENST00000533069 MAP1LC3BQ9GZQ8 125 aa12.15□□□□□ -0.46
PKP3-209ENST00000533069 SLC25A22Q9H936 323 aa12.15□□□□□ -0.46
PKP3-209ENST00000533069 TMEM167BQ9NRX6 74 aa12.15□□□□□ -0.46
PKP3-209ENST00000533069 ZNF98A6NK75 572 aa12.14□□□□□ -0.47
PKP3-209ENST00000533069 ISLRO14498 428 aa12.14□□□□□ -0.47
PKP3-209ENST00000533069 GIG44P09565 113 aaPredicted RBP12.14□□□□□ -0.47
PKP3-209ENST00000533069 HLA-DRB4P13762 266 aa12.14□□□□□ -0.47
PKP3-209ENST00000533069 C1QTNF4Q9BXJ3 329 aa12.14□□□□□ -0.47
PKP3-209ENST00000533069 ARL2-SNX15V9GYD0 113 aa12.14□□□□□ -0.47
PKP3-209ENST00000533069 HLA-DRB4X5D2U9 266 aa12.14□□□□□ -0.47
PKP3-209ENST00000533069 H3BMM0 161 aa12.13□□□□□ -0.47
PKP3-209ENST00000533069 SOCS3O14543 225 aa12.13□□□□□ -0.47
PKP3-209ENST00000533069 IFNA1P01562 189 aa12.13□□□□□ -0.47
PKP3-209ENST00000533069 FHITP49789 147 aa12.13□□□□□ -0.47
PKP3-209ENST00000533069 ZNF726P1Q15940 193 aa12.13□□□□□ -0.47
PKP3-209ENST00000533069 GUK1Q16774 197 aa12.13□□□□□ -0.47
PKP3-209ENST00000533069 MIR17HGQ75NE6 70 aa12.13□□□□□ -0.47
PKP3-209ENST00000533069 UHRF2Q96PU4 802 aa12.13□□□□□ -0.47
PKP3-209ENST00000533069 OR7C2O60412 319 aa12.12□□□□□ -0.47
PKP3-209ENST00000533069 SPATA31B1PQ5VZV4 182 aa12.12□□□□□ -0.47
PKP3-209ENST00000533069 CEMP1Q6PRD7 247 aaPredicted RBP12.12□□□□□ -0.47
PKP3-209ENST00000533069 LCN15Q6UWW0 184 aa12.12□□□□□ -0.47
PKP3-209ENST00000533069 FOXI2Q6ZQN5 318 aa12.12□□□□□ -0.47
PKP3-209ENST00000533069 LINC00052Q96N35 136 aa12.12□□□□□ -0.47
PKP3-209ENST00000533069 PAXXQ9BUH6 204 aa12.12□□□□□ -0.47
PKP3-209ENST00000533069 OR51M1Q9H341 326 aa12.12□□□□□ -0.47
PKP3-209ENST00000533069 MED9Q9NWA0 146 aa12.12□□□□□ -0.47
PKP3-209ENST00000533069 SACSQ9NZJ4 4579 aa12.11□□□□□ -0.47
PKP3-209ENST00000533069 MIFP14174 115 aa12.11□□□□□ -0.47
PKP3-209ENST00000533069 PDE6HQ13956 83 aa12.11□□□□□ -0.47
PKP3-209ENST00000533069 FAM167A-AS1Q96KT0 104 aa12.11□□□□□ -0.47
PKP3-209ENST00000533069 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
PKP3-209ENST00000533069 TXNDC17Q9BRA2 123 aa12.11□□□□□ -0.47
PKP3-209ENST00000533069 SCRT1Q9BWW7 348 aa12.11□□□□□ -0.47
PKP3-209ENST00000533069 SLC25A2Q9BXI2 301 aa12.11□□□□□ -0.47
PKP3-209ENST00000533069 NKX6-2Q9C056 277 aaPredicted RBP12.11□□□□□ -0.47
PKP3-209ENST00000533069 SAV1Q9H4B6 383 aaPredicted RBP12.11□□□□□ -0.47
PKP3-209ENST00000533069 MANBALQ9NQG1 85 aa12.11□□□□□ -0.47
PKP3-209ENST00000533069 KLK5Q9Y337 293 aaPredicted RBP12.11□□□□□ -0.47
PKP3-209ENST00000533069 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
PKP3-209ENST00000533069 HIST1H1EP10412 219 aaKnown RBP12.1□□□□□ -0.47
PKP3-209ENST00000533069 NDUFA5Q16718 116 aa12.1□□□□□ -0.47
PKP3-209ENST00000533069 Q8NAQ8 132 aa12.1□□□□□ -0.47
PKP3-209ENST00000533069 CSNK1G2-AS1Q8NCQ2 148 aa12.1□□□□□ -0.47
PKP3-209ENST00000533069 C11orf45Q8TAV5 145 aa12.1□□□□□ -0.47
PKP3-209ENST00000533069 SUN5Q8TC36 379 aa12.1□□□□□ -0.47
PKP3-209ENST00000533069 C16orf92Q96LL3 132 aa12.1□□□□□ -0.47
PKP3-209ENST00000533069 HRH4Q9H3N8 390 aa12.1□□□□□ -0.47
PKP3-209ENST00000533069 CLEC5AQ9NY25 188 aa12.1□□□□□ -0.47
PKP3-209ENST00000533069 ZNF253O75346 499 aa12.09□□□□□ -0.47
PKP3-209ENST00000533069 NDUFS6O75380 124 aaKnown RBP12.09□□□□□ -0.47
PKP3-209ENST00000533069 GCHFRP30047 84 aa12.09□□□□□ -0.47
PKP3-209ENST00000533069 UBE2L3P68036 154 aaKnown RBP12.09□□□□□ -0.47
PKP3-209ENST00000533069 EBLN2Q6P2I7 272 aa12.09□□□□□ -0.47
PKP3-209ENST00000533069 LYPD1Q8N2G4 141 aa12.09□□□□□ -0.47
PKP3-209ENST00000533069 SMDT1Q9H4I9 107 aa12.09□□□□□ -0.47
PKP3-209ENST00000533069 A0A087X0K7 114 aa12.08□□□□□ -0.48
PKP3-209ENST00000533069 IGHV4-28A0A0C4DH34 117 aa12.08□□□□□ -0.48
PKP3-209ENST00000533069 GDF5OSQ5U4N7 250 aa12.08□□□□□ -0.48
PKP3-209ENST00000533069 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.08□□□□□ -0.48
PKP3-209ENST00000533069 SSX7Q7RTT5 188 aa12.08□□□□□ -0.48
PKP3-209ENST00000533069 PHLDA1Q8WV24 401 aaPredicted RBP12.08□□□□□ -0.48
PKP3-209ENST00000533069 TCEAL7Q9BRU2 100 aa12.08□□□□□ -0.48
PKP3-209ENST00000533069 X6R8D5 127 aa12.08□□□□□ -0.48
PKP3-209ENST00000533069 TRAV5A0A0B4J249 113 aa12.07□□□□□ -0.48
PKP3-209ENST00000533069 RAB19A4D1S5 217 aa12.07□□□□□ -0.48
PKP3-209ENST00000533069 LINC00862A6NCI5 91 aa12.07□□□□□ -0.48
PKP3-209ENST00000533069 DEFB4AO15263 64 aa12.07□□□□□ -0.48
PKP3-209ENST00000533069 IGLC2P0DOY2 106 aa12.07□□□□□ -0.48
PKP3-209ENST00000533069 MORN5Q5VZ52 161 aa12.07□□□□□ -0.48
PKP3-209ENST00000533069 IQCF2Q8IXL9 164 aa12.07□□□□□ -0.48
PKP3-209ENST00000533069 C17orf77Q96MU5 243 aa12.07□□□□□ -0.48
PKP3-209ENST00000533069 XCL2Q9UBD3 114 aa12.07□□□□□ -0.48
PKP3-209ENST00000533069 A0A0J9YX75 114 aa12.06□□□□□ -0.48
PKP3-209ENST00000533069 A0A1W2PRE2 83 aa12.06□□□□□ -0.48
PKP3-209ENST00000533069 MRPS12O15235 138 aaKnown RBP12.06□□□□□ -0.48
PKP3-209ENST00000533069 HMGB3O15347 200 aaKnown RBP12.06□□□□□ -0.48
PKP3-209ENST00000533069 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
PKP3-209ENST00000533069 FGF8P55075 233 aaPredicted RBP12.06□□□□□ -0.48
PKP3-209ENST00000533069 NANOS2P60321 138 aaKnown RBP12.06□□□□□ -0.48
PKP3-209ENST00000533069 PSG9Q00887 426 aa12.06□□□□□ -0.48
PKP3-209ENST00000533069 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
PKP3-209ENST00000533069 FXYD5Q96DB9 178 aa12.06□□□□□ -0.48
PKP3-209ENST00000533069 SLC50A1Q9BRV3 221 aa12.06□□□□□ -0.48
PKP3-209ENST00000533069 IGKV3-20P01619 116 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 RBMY1A1P0DJD3 496 aaKnown RBP12.05□□□□□ -0.48
PKP3-209ENST00000533069 RBMY1CP0DJD4 496 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 DEFB1P60022 68 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 RBMY1FQ15415 496 aaKnown RBP12.05□□□□□ -0.48
PKP3-209ENST00000533069 ARL6IP6Q8N6S5 226 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 LINC00476Q8WZB0 136 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 ZNF503Q96F45 646 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 C20orf173Q96LM9 149 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 FAM210AQ96ND0 272 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 ALMS1Q8TCU4 4167 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 DNAH1Q9P2D7 4330 aa12.05□□□□□ -0.48
PKP3-209ENST00000533069 PLECQ15149 4684 aaKnown RBP12.04□□□□□ -0.48
PKP3-209ENST00000533069 TRBV19A0A075B6N1 114 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms