RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 RBMY1BA6NDE4 496 aaKnown RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 RBMY1EA6NEQ0 496 aaKnown RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 K7EPK0 472 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 DNASE2O00115 360 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 GOSR2O14653 212 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 CFDP00746 253 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 RBMY1DP0C7P1 496 aaKnown RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 PVALBP20472 110 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 CDC34P49427 236 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 CAV2P51636 162 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 AP2S1P53680 142 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 S100A10P60903 97 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR2F1Q13607 317 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 LAGE3Q14657 143 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 ODF3L2Q3SX64 289 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 TMEM14EPQ6UXP3 125 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 LINC00322Q6ZN03 302 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 ACOT7LQ6ZUV0 252 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 LYPD6BQ8NI32 183 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 C8orf49Q96NF6 230 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 RCHY1Q96PM5 261 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 TRGV9Q99603 122 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 TM2D3Q9BRN9 247 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 MARVELD1Q9BSK0 173 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 ACTR3CQ9C0K3 210 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 MS4A6AQ9H2W1 248 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR51M1Q9H341 326 aa4.28□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGKV1OR2-108A0A075B7D4 117 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 LOC102724200A0A096LPH7 203 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 TRAV2A0A0B4J234 112 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 LOC105371267A0A1B0GV96 52 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 PMS2P5A8MQ11 134 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 FNDC10F2Z333 226 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 BUB3O43684 328 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 SSNA1O43805 119 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 CCNKO75909 580 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 SIX6O95475 246 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 ID1P41134 155 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 LYZP61626 148 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 RRAS2P62070 204 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 CYCSP99999 105 aaKnown RBP4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 TMEM144Q7Z5S9 345 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 ZNF546Q86UE3 836 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 STX12Q86Y82 276 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 GGACTQ9BVM4 153 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 GGTLC1Q9BX51 225 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 CSTL1Q9H114 145 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 NPVFQ9HCQ7 196 aa4.27□□□□□ -1.73
HMGB1P42-201ENST00000532126 IGLV5-39A0A0G2JS06 123 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 FAM24AA6NFZ4 105 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 K7EQG2 157 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 DEDDO75618 318 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 CST7O76096 145 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 TSPAN13O95857 204 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 PTTG1O95997 202 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 RLN2P04090 185 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 ORM2P19652 201 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 M6PRP20645 277 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 GATA2P23769 480 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 S100A7P31151 101 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 APOC4P55056 127 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 SELENOTP62341 195 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 SLC38A11Q08AI6 406 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 IL15RAQ13261 267 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 C1orf194Q5T5A4 169 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 CYP2G1PQ6ZSU1 146 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 SLC51BQ86UW2 128 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 OR8I2Q8N0Y5 310 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 LINC01561Q8N1V8 128 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 PRSS3P2Q8NHM4 247 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 TMEM147Q9BVK8 224 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 NMES1Q9C002 83 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 LYRM2Q9NU23 88 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 V9GYY9 64 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 SORL1Q92673 2214 aa4.26□□□□□ -1.73
HMGB1P42-201ENST00000532126 TGP01266 2768 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 KIR2DL5BA0A0G2JN68 375 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 KIR2DL5BA0A0G2JPC4 375 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 IGSF23A1L1A6 192 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 HYPMO75409 117 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 OR5G3P0C626 314 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 ZNF688P0C7X2 276 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 LINC00869P0C866 280 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 S100A11P31949 105 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 SULT1A1P50225 295 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 H2BFSP57053 126 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 DEFB131AP59861 70 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 SNRPD3P62318 126 aaKnown RBP4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 HBG1P69891 147 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 HBG2P69892 147 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 S100A12P80511 92 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 RAB31Q13636 194 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 LEMD1Q68G75 181 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 KIR2DL5AQ8N109 375 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 FAM24BQ8N5W8 94 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 TMEM252Q8N6L7 170 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms