RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 MAP1LC3BQ9GZQ8 125 aa6.84□□□□□ -1.31
TRIM53AP-201ENST00000532014 GGTLC3B5MD39 225 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 CXorf1O96002 111 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 FRMD6-AS1P0C7T7 363 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 ZNF705DP0CH99 300 aaPredicted RBP6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 ZNF705BP0CI00 300 aaPredicted RBP6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 C4BPBP20851 252 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 RANP62826 216 aaKnown RBP6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 CCL20P78556 96 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 PSG3Q16557 428 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 TEX261Q6UWH6 196 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 DPPA3Q6W0C5 159 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 SFT2D1Q8WV19 159 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 KRTAP9-9Q9BYP9 154 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 KRTAP9-4Q9BYQ2 154 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 SAV1Q9H4B6 383 aaPredicted RBP6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 SRD5A3Q9H8P0 318 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 STARD9Q9P2P6 4700 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 STAB2Q8WWQ8 2551 aa6.83□□□□□ -1.32
TRIM53AP-201ENST00000532014 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 A0A0J9YX75 114 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 A0A1B0GV50 99 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 H3BMM0 161 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 GIG44P09565 113 aaPredicted RBP6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 HLA-DRB4P13762 266 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 RAB5CP51148 216 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 ICAM4Q14773 271 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 ACTL10Q5JWF8 245 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 SAMD13Q5VXD3 122 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 EIF5AL1Q6IS14 154 aaKnown RBP6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 TRPT1Q86TN4 253 aaKnown RBP6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 Q9H3A6 140 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 YTHDF2Q9Y5A9 579 aaKnown RBP6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 HLA-DRB4X5D2U9 266 aa6.82□□□□□ -1.32
TRIM53AP-201ENST00000532014 TRAV1-1A0A0B4J248 108 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 A8MTW9 85 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 H2AFB1P0C5Y9 115 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 ID1P41134 155 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 IFITM2Q01629 132 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 FOXI2Q6ZQN5 318 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 ZNF680Q8NEM1 530 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 LYPD6BQ8NI32 183 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 LRRC20Q8TCA0 184 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 MRAPQ8TCY5 172 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 RPUSD4Q96CM3 377 aaKnown RBP6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 DYNC2H1Q8NCM8 4307 aaKnown RBP6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 FAM74A7A6NL05 159 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 ZNF705EA8MWA4 302 aaPredicted RBP6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 UBE2G2P60604 165 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 PSG9Q00887 426 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 AMTNQ6UX39 209 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 SBSPONQ8IVN8 264 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 CCDC28AQ8IWP9 274 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 LYPD1Q8N2G4 141 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 ZNF738Q8NE65 137 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 OR8A1Q8NGG7 326 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 PCNPQ8WW12 178 aaKnown RBP6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 TMEM167BQ9NRX6 74 aa6.81□□□□□ -1.32
TRIM53AP-201ENST00000532014 IGKV2-40A0A087WW87 121 aaPredicted RBP6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 IGKV2D-40P01614 121 aaPredicted RBP6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 RPL35AP18077 110 aaKnown RBP6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 CNN1P51911 297 aaKnown RBP6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 CMC4P56277 68 aaPredicted RBP6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 GNG5P63218 68 aa6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 DEFB121Q5J5C9 76 aa6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 IQCF2Q8IXL9 164 aa6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 MRPL53Q96EL3 112 aaKnown RBP6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 KRTAP4-12Q9BQ66 201 aa6.8□□□□□ -1.32
TRIM53AP-201ENST00000532014 PLECQ15149 4684 aaKnown RBP6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 LOC102724200A0A096LPH7 203 aaPredicted RBP6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 A0A1W2PRE2 83 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 PGPA6NDG6 321 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 DIRC3C9JPN6 131 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 IGKV3-20P01619 116 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 ATP5G3P48201 142 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 ERCC8Q13216 396 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 HAGHQ16775 308 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 STHQ8IWL8 128 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 VGLL1Q99990 258 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 SLC35B3Q9H1N7 401 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 AAMDCQ9H7C9 122 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 TUBA4BQ9H853 241 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 OTORQ9NRC9 128 aa6.79□□□□□ -1.32
TRIM53AP-201ENST00000532014 NPIPB6E9PJ23 425 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 PAGE4O60829 102 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 NMBP08949 121 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 CT45A10P0DMU9 189 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 SUMO1P63165 101 aaKnown RBP6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 HIST1H1AQ02539 215 aaPredicted RBP6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 KIR3DS1Q14943 382 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 CSNK1G2-AS1Q8NCQ2 148 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 FAM19A4Q96LR4 140 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 CLUHP3Q96NS8 147 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 ASCL2Q99929 193 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 CLEC5AQ9NY25 188 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 PRELID1Q9Y255 219 aa6.78□□□□□ -1.32
TRIM53AP-201ENST00000532014 TRAV8-1A0A0A6YYK1 113 aa6.77□□□□□ -1.33
TRIM53AP-201ENST00000532014 CRXO43186 299 aaPredicted RBP6.77□□□□□ -1.33
TRIM53AP-201ENST00000532014 IGLV2-11P01706 119 aa6.77□□□□□ -1.33
TRIM53AP-201ENST00000532014 FXYD7P58549 80 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms