RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 ZNF431Q8TF32 576 aaPredicted RBP9.31□□□□□ -0.92
AMBRA1-210ENST00000531542 C2orf50Q96LR7 162 aa9.31□□□□□ -0.92
AMBRA1-210ENST00000531542 PFDN5Q99471 154 aa9.31□□□□□ -0.92
AMBRA1-210ENST00000531542 NOP10Q9NPE3 64 aaKnown RBP9.31□□□□□ -0.92
AMBRA1-210ENST00000531542 UQCC1Q9NVA1 299 aa9.31□□□□□ -0.92
AMBRA1-210ENST00000531542 NACAE9PAV3 2078 aa9.31□□□□□ -0.92
AMBRA1-210ENST00000531542 PRAC2D3DTV9 90 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 NPIPB6E9PJ23 425 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 NUDT3O95989 172 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 HTN1P15515 57 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 PVALBP20472 110 aaPredicted RBP9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 S100A11P31949 105 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 SULT1A1P50225 295 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 CAV2P51636 162 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 GFI1BQ5VTD9 330 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 C12orf45Q8N5I9 185 aaPredicted RBP9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 RNF141Q8WVD5 230 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 LYRM2Q9NU23 88 aaPredicted RBP9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 NDUFA13Q9P0J0 144 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 LINC00588Q9Y4M8 146 aa9.3□□□□□ -0.92
AMBRA1-210ENST00000531542 CCSO14618 274 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 M6PRP20645 277 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 LEPP41159 167 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 BCAP31P51572 246 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 DAZ2Q13117 558 aaKnown RBP9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 LINC00299Q6ZSB3 139 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 C6orf223Q8N319 242 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 C18orf15Q96N68 181 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 PYGO2Q9BRQ0 406 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 LINC00467Q9BRT7 94 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 SLC39A9Q9NUM3 307 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 TMEM14CQ9P0S9 112 aa9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 LSM5Q9Y4Y9 91 aaKnown RBP9.29□□□□□ -0.92
AMBRA1-210ENST00000531542 C5orf51A6NDU8 294 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 MPDU1O75352 247 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 CST7O76096 145 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 CT45A10P0DMU9 189 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 BTF3P20290 206 aaKnown RBP9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 HBG1P69891 147 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 HBG2P69892 147 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 PDE6HQ13956 83 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 ATP6V1FQ16864 119 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 MIC13Q5XKP0 118 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 UPK3BQ9BT76 320 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 CCDC32Q9BV29 185 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 NUDT15Q9NV35 164 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 ZNF586Q9NXT0 402 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 PRELID1Q9Y255 219 aa9.28□□□□□ -0.92
AMBRA1-210ENST00000531542 RYR1P21817 5038 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 TRBV19A0A075B6N1 114 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 TRAV5A0A0B4J249 113 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 FAM24AA6NFZ4 105 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 FAM25EA8MYX2 175 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 RLN2P04090 185 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 SLC25A5P05141 298 aaKnown RBP9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 SNRPCP09234 159 aaKnown RBP9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 HIST1H1EP10412 219 aaKnown RBP9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 CLINT1Q14677 625 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 SSX7Q7RTT5 188 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 STX12Q86Y82 276 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 TMEM252Q8N6L7 170 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 GNPNAT1Q96EK6 184 aaPredicted RBP9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 FAM19A4Q96LR4 140 aa9.27□□□□□ -0.93
AMBRA1-210ENST00000531542 TRAV6A0A075B6T7 132 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 TRAV26-1A0A087WT03 109 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 A0A1W2PPQ1 181 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 SNURFLB1AK76 121 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 KLLNB2CW77 178 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 H3BTX0 84 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 NMBP08949 121 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 TNP2Q05952 138 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 TTC32Q5I0X7 151 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 ZNF575Q86XF7 245 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 LINC00477Q96M19 166 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 SEC22CQ9BRL7 303 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 PARD6GQ9BYG4 376 aaPredicted RBP9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 Q9H8V8 135 aa9.26□□□□□ -0.93
AMBRA1-210ENST00000531542 MUC4Q99102 2169 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 TRAV12-3A0A0B4J271 114 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 IGSF23A1L1A6 192 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 ZNF324O75467 553 aaPredicted RBP9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 CDK2AP2O75956 126 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 NDUFB4O95168 129 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 H2AFB2P0C5Z0 115 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 PRB4P10163 310 aaPredicted RBP9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 CRISP2P16562 243 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 HOXA5P20719 270 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 BAXQ07812 192 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 OR5I1Q13606 314 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 RAB32Q13637 225 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 ANXA2RQ3ZCQ2 193 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 ZNF680Q8NEM1 530 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 Q9H3A6 140 aa9.25□□□□□ -0.93
AMBRA1-210ENST00000531542 UBE2L5PA0A1B0GUS4 154 aa9.24□□□□□ -0.93
AMBRA1-210ENST00000531542 GAGE12BA1L429 117 aa9.24□□□□□ -0.93
AMBRA1-210ENST00000531542 GAGE7O76087 117 aa9.24□□□□□ -0.93
AMBRA1-210ENST00000531542 GAGE12FP0CL80 117 aa9.24□□□□□ -0.93
AMBRA1-210ENST00000531542 GAGE12GP0CL81 117 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms