RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 KIR3DS1Q14943 382 aa13.43□□□□□ -0.26
PTPRU-211ENST00000531385 Q5BKY6 102 aa13.43□□□□□ -0.26
PTPRU-211ENST00000531385 PPP1R14DQ9NXH3 145 aa13.43□□□□□ -0.26
PTPRU-211ENST00000531385 PLA2G2EQ9NZK7 142 aa13.43□□□□□ -0.26
PTPRU-211ENST00000531385 TMEM14CQ9P0S9 112 aa13.43□□□□□ -0.26
PTPRU-211ENST00000531385 SMIM9A6NGZ8 99 aa13.42□□□□□ -0.26
PTPRU-211ENST00000531385 HBE1P02100 147 aa13.42□□□□□ -0.26
PTPRU-211ENST00000531385 AMBPP02760 352 aa13.42□□□□□ -0.26
PTPRU-211ENST00000531385 GUK1Q16774 197 aa13.42□□□□□ -0.26
PTPRU-211ENST00000531385 FFAR4Q5NUL3 377 aa13.42□□□□□ -0.26
PTPRU-211ENST00000531385 KCNIP2Q9NS61 270 aa13.42□□□□□ -0.26
PTPRU-211ENST00000531385 KMT2AQ03164 3969 aa13.41□□□□□ -0.26
PTPRU-211ENST00000531385 IGLL5B9A064 214 aa13.41□□□□□ -0.26
PTPRU-211ENST00000531385 C17orf112F2Z3M2 114 aa13.41□□□□□ -0.26
PTPRU-211ENST00000531385 IFNA5P01569 189 aa13.41□□□□□ -0.26
PTPRU-211ENST00000531385 HIST1H1EP10412 219 aaKnown RBP13.41□□□□□ -0.26
PTPRU-211ENST00000531385 RRN3P1Q2M238 152 aa13.41□□□□□ -0.26
PTPRU-211ENST00000531385 EXOC3-AS1Q8N2X6 119 aa13.41□□□□□ -0.26
PTPRU-211ENST00000531385 OR10J6PQ8NGY7 276 aa13.41□□□□□ -0.26
PTPRU-211ENST00000531385 SCGB1C1Q8TD33 95 aa13.41□□□□□ -0.26
PTPRU-211ENST00000531385 C2CD4CQ8TF44 421 aa13.41□□□□□ -0.26
PTPRU-211ENST00000531385 TRAV10A0A0B4J240 114 aa13.4□□□□□ -0.26
PTPRU-211ENST00000531385 J3KRW8 73 aa13.4□□□□□ -0.26
PTPRU-211ENST00000531385 OR10J4P0C629 311 aa13.4□□□□□ -0.26
PTPRU-211ENST00000531385 RGS21Q2M5E4 152 aa13.4□□□□□ -0.26
PTPRU-211ENST00000531385 FAM222AQ5U5X8 452 aa13.4□□□□□ -0.26
PTPRU-211ENST00000531385 RPP25LQ8N5L8 163 aaKnown RBP13.4□□□□□ -0.26
PTPRU-211ENST00000531385 FUT9Q9Y231 359 aa13.4□□□□□ -0.26
PTPRU-211ENST00000531385 YTHDF2Q9Y5A9 579 aaKnown RBP13.4□□□□□ -0.26
PTPRU-211ENST00000531385 TIMM9Q9Y5J7 89 aa13.4□□□□□ -0.26
PTPRU-211ENST00000531385 ZNF253O75346 499 aa13.39□□□□□ -0.27
PTPRU-211ENST00000531385 ERCC8Q13216 396 aa13.39□□□□□ -0.27
PTPRU-211ENST00000531385 MRPL32Q9BYC8 188 aaKnown RBP13.39□□□□□ -0.27
PTPRU-211ENST00000531385 DKK2Q9UBU2 259 aa13.39□□□□□ -0.27
PTPRU-211ENST00000531385 TMEM189A5PLL7 270 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 C11orf94C9JXX5 98 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 OR7C2O60412 319 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 GIPP09681 153 aaPredicted RBP13.38□□□□□ -0.27
PTPRU-211ENST00000531385 SPART-AS1P0CW21 52 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 CT45A10P0DMU9 189 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 AZU1P20160 251 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 FXYD5Q96DB9 178 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 ZNF503Q96F45 646 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 PHYHIPLQ96FC7 376 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 PAXXQ9BUH6 204 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 OR51M1Q9H341 326 aa13.38□□□□□ -0.27
PTPRU-211ENST00000531385 DEFB131BA0A096LNP1 70 aa13.37□□□□□ -0.27
PTPRU-211ENST00000531385 NPIPB6E9PJ23 425 aa13.37□□□□□ -0.27
PTPRU-211ENST00000531385 HTN1P15515 57 aa13.37□□□□□ -0.27
PTPRU-211ENST00000531385 CDKN1BP46527 198 aa13.37□□□□□ -0.27
PTPRU-211ENST00000531385 ICAM4Q14773 271 aa13.37□□□□□ -0.27
PTPRU-211ENST00000531385 GFI1BQ5VTD9 330 aa13.37□□□□□ -0.27
PTPRU-211ENST00000531385 FAM122CQ6P4D5 195 aa13.37□□□□□ -0.27
PTPRU-211ENST00000531385 LINC01587Q99440 93 aa13.37□□□□□ -0.27
PTPRU-211ENST00000531385 IGKV2-40A0A087WW87 121 aaPredicted RBP13.36□□□□□ -0.27
PTPRU-211ENST00000531385 IGKV2D-40P01614 121 aaPredicted RBP13.36□□□□□ -0.27
PTPRU-211ENST00000531385 NBEAP1P0C6P0 100 aa13.36□□□□□ -0.27
PTPRU-211ENST00000531385 PDE6HQ13956 83 aa13.36□□□□□ -0.27
PTPRU-211ENST00000531385 OXA1LQ15070 435 aa13.36□□□□□ -0.27
PTPRU-211ENST00000531385 RNF141Q8WVD5 230 aa13.36□□□□□ -0.27
PTPRU-211ENST00000531385 APLNQ9ULZ1 77 aa13.36□□□□□ -0.27
PTPRU-211ENST00000531385 IGHV4-4A0A075B6R2 117 aa13.35□□□□□ -0.27
PTPRU-211ENST00000531385 FXYD6-FXYD2A0A087WZ82 144 aa13.35□□□□□ -0.27
PTPRU-211ENST00000531385 RAB2AP61019 212 aa13.35□□□□□ -0.27
PTPRU-211ENST00000531385 UBE2L3P68036 154 aaKnown RBP13.35□□□□□ -0.27
PTPRU-211ENST00000531385 MRPL53Q96EL3 112 aaKnown RBP13.35□□□□□ -0.27
PTPRU-211ENST00000531385 AQP10Q96PS8 301 aa13.35□□□□□ -0.27
PTPRU-211ENST00000531385 NIPSNAP3BQ9BS92 247 aa13.35□□□□□ -0.27
PTPRU-211ENST00000531385 PLAC8L1A1L4L8 177 aa13.34□□□□□ -0.27
PTPRU-211ENST00000531385 HTN3P15516 51 aa13.34□□□□□ -0.27
PTPRU-211ENST00000531385 HSD17B11Q8NBQ5 300 aa13.34□□□□□ -0.27
PTPRU-211ENST00000531385 AAMDCQ9H7C9 122 aa13.34□□□□□ -0.27
PTPRU-211ENST00000531385 EPPK1P58107 5090 aaKnown RBP13.34□□□□□ -0.27
PTPRU-211ENST00000531385 G3V3Q6 166 aa13.33□□□□□ -0.28
PTPRU-211ENST00000531385 HMGB3O15347 200 aaKnown RBP13.33□□□□□ -0.28
PTPRU-211ENST00000531385 OR2T35Q8NGX2 323 aa13.33□□□□□ -0.28
PTPRU-211ENST00000531385 AGPAT4-IT1Q9H0P7 198 aa13.33□□□□□ -0.28
PTPRU-211ENST00000531385 PRELID1Q9Y255 219 aa13.33□□□□□ -0.28
PTPRU-211ENST00000531385 TRAV12-3A0A0B4J271 114 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 RNF222A6NCQ9 220 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 TSPOP30536 169 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 LEPP41159 167 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 TAS2R60P59551 318 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 RANP62826 216 aaKnown RBP13.32□□□□□ -0.28
PTPRU-211ENST00000531385 KHDC3LQ587J8 217 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 TMEM256Q8N2U0 113 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 VGLL1Q99990 258 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 SH3BGRL3Q9H299 93 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 DNAH6Q9C0G6 4158 aa13.32□□□□□ -0.28
PTPRU-211ENST00000531385 M6PRP20645 277 aa13.31□□□□□ -0.28
PTPRU-211ENST00000531385 ATP6V0CP27449 155 aa13.31□□□□□ -0.28
PTPRU-211ENST00000531385 DAD1P61803 113 aa13.31□□□□□ -0.28
PTPRU-211ENST00000531385 BTN1A1Q13410 526 aa13.31□□□□□ -0.28
PTPRU-211ENST00000531385 ACOT6Q3I5F7 207 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-211ENST00000531385 LGALS9CQ6DKI2 356 aa13.31□□□□□ -0.28
PTPRU-211ENST00000531385 ODF3Q96PU9 254 aa13.31□□□□□ -0.28
PTPRU-211ENST00000531385 Q9H3A6 140 aa13.31□□□□□ -0.28
PTPRU-211ENST00000531385 TEX48A0A1B0GUV7 120 aa13.3□□□□□ -0.28
PTPRU-211ENST00000531385 SMLR1H3BR10 107 aa13.3□□□□□ -0.28
PTPRU-211ENST00000531385 H7BYZ3 331 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms