RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 RBMY1DP0C7P1 496 aaKnown RBP12.5□□□□□ -0.41
SF3B2-211ENST00000531041 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
SF3B2-211ENST00000531041 DEFB1P60022 68 aa12.5□□□□□ -0.41
SF3B2-211ENST00000531041 ACTL10Q5JWF8 245 aa12.5□□□□□ -0.41
SF3B2-211ENST00000531041 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
SF3B2-211ENST00000531041 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
SF3B2-211ENST00000531041 LINC00322Q6ZN03 302 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-211ENST00000531041 STHQ8IWL8 128 aa12.5□□□□□ -0.41
SF3B2-211ENST00000531041 RPUSD4Q96CM3 377 aaKnown RBP12.5□□□□□ -0.41
SF3B2-211ENST00000531041 OTORQ9NRC9 128 aa12.5□□□□□ -0.41
SF3B2-211ENST00000531041 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
SF3B2-211ENST00000531041 A0A1W2PRE2 83 aa12.49□□□□□ -0.41
SF3B2-211ENST00000531041 ZNF705FA8MVS1 300 aaPredicted RBP12.49□□□□□ -0.41
SF3B2-211ENST00000531041 F6UB75 175 aa12.49□□□□□ -0.41
SF3B2-211ENST00000531041 H3BMM0 161 aa12.49□□□□□ -0.41
SF3B2-211ENST00000531041 M0R3E3 92 aa12.49□□□□□ -0.41
SF3B2-211ENST00000531041 HBE1P02100 147 aa12.49□□□□□ -0.41
SF3B2-211ENST00000531041 FRMD6-AS1P0C7T7 363 aa12.49□□□□□ -0.41
SF3B2-211ENST00000531041 ZNF680Q8NEM1 530 aa12.49□□□□□ -0.41
SF3B2-211ENST00000531041 LOC102724200A0A096LPH7 203 aaPredicted RBP12.48□□□□□ -0.41
SF3B2-211ENST00000531041 PGPA6NDG6 321 aa12.48□□□□□ -0.41
SF3B2-211ENST00000531041 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
SF3B2-211ENST00000531041 TRPT1Q86TN4 253 aaKnown RBP12.48□□□□□ -0.41
SF3B2-211ENST00000531041 ARL6IP6Q8N6S5 226 aa12.48□□□□□ -0.41
SF3B2-211ENST00000531041 OR8A1Q8NGG7 326 aa12.48□□□□□ -0.41
SF3B2-211ENST00000531041 CLUHP3Q96NS8 147 aa12.48□□□□□ -0.41
SF3B2-211ENST00000531041 A8MTW9 85 aa12.47□□□□□ -0.41
SF3B2-211ENST00000531041 IFNA7P01567 189 aa12.47□□□□□ -0.41
SF3B2-211ENST00000531041 NKX6-2Q9C056 277 aaPredicted RBP12.47□□□□□ -0.41
SF3B2-211ENST00000531041 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
SF3B2-211ENST00000531041 A0A1B0GV50 99 aa12.46□□□□□ -0.41
SF3B2-211ENST00000531041 FAM74A7A6NL05 159 aa12.46□□□□□ -0.41
SF3B2-211ENST00000531041 PRAC2D3DTV9 90 aa12.46□□□□□ -0.41
SF3B2-211ENST00000531041 DUSP14O95147 198 aaKnown RBP12.46□□□□□ -0.41
SF3B2-211ENST00000531041 CSN1S1P47710 185 aa12.46□□□□□ -0.41
SF3B2-211ENST00000531041 PPT1P50897 306 aa12.46□□□□□ -0.41
SF3B2-211ENST00000531041 SUMO1P63165 101 aaKnown RBP12.46□□□□□ -0.41
SF3B2-211ENST00000531041 RXFP4Q8TDU9 374 aa12.46□□□□□ -0.41
SF3B2-211ENST00000531041 YTHDF2Q9Y5A9 579 aaKnown RBP12.46□□□□□ -0.41
SF3B2-211ENST00000531041 KIR2DL5BA0A0G2JN68 375 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 KIR2DL5BA0A0G2JPC4 375 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 GGTLC3B5MD39 225 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 ZNF705DP0CH99 300 aaPredicted RBP12.45□□□□□ -0.42
SF3B2-211ENST00000531041 ZNF705BP0CI00 300 aaPredicted RBP12.45□□□□□ -0.42
SF3B2-211ENST00000531041 RPL35AP18077 110 aaKnown RBP12.45□□□□□ -0.42
SF3B2-211ENST00000531041 CNN1P51911 297 aaKnown RBP12.45□□□□□ -0.42
SF3B2-211ENST00000531041 UBE2G2P60604 165 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 CCL20P78556 96 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 KIR2DL5AQ8N109 375 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 OR10J6PQ8NGY7 276 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 KIR2DL5BQ8NHK3 375 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 APOC4P55056 127 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 HIST1H1AQ02539 215 aaPredicted RBP12.45□□□□□ -0.42
SF3B2-211ENST00000531041 PMS2P11Q13670 270 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 C5orf17Q8NAS9 161 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 OR4B1Q8NGF8 309 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 LYPD6BQ8NI32 183 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 CMTM2Q8TAZ6 248 aa12.45□□□□□ -0.42
SF3B2-211ENST00000531041 DIRC3C9JPN6 131 aa12.44□□□□□ -0.42
SF3B2-211ENST00000531041 SLC25A5P05141 298 aaKnown RBP12.44□□□□□ -0.42
SF3B2-211ENST00000531041 PRB4P10163 310 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-211ENST00000531041 MORN3Q6PF18 240 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-211ENST00000531041 MANBALQ9NQG1 85 aa12.44□□□□□ -0.42
SF3B2-211ENST00000531041 RBAKDNA6NC62 111 aa12.43□□□□□ -0.42
SF3B2-211ENST00000531041 NPIPB6E9PJ23 425 aa12.43□□□□□ -0.42
SF3B2-211ENST00000531041 PAGE4O60829 102 aa12.43□□□□□ -0.42
SF3B2-211ENST00000531041 IGKV3-20P01619 116 aa12.43□□□□□ -0.42
SF3B2-211ENST00000531041 NUTF2P61970 127 aaKnown RBP12.43□□□□□ -0.42
SF3B2-211ENST00000531041 HAGHQ16775 308 aa12.43□□□□□ -0.42
SF3B2-211ENST00000531041 AMTNQ6UX39 209 aa12.43□□□□□ -0.42
SF3B2-211ENST00000531041 C9orf47Q6ZRZ4 202 aa12.43□□□□□ -0.42
SF3B2-211ENST00000531041 B9D2Q9BPU9 175 aa12.43□□□□□ -0.42
SF3B2-211ENST00000531041 CSTL1Q9H114 145 aa12.43□□□□□ -0.42
SF3B2-211ENST00000531041 IGKV2-40A0A087WW87 121 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-211ENST00000531041 UBE2CO00762 179 aa12.42□□□□□ -0.42
SF3B2-211ENST00000531041 IGKV2D-40P01614 121 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-211ENST00000531041 CST9LP1Q5W188 147 aa12.42□□□□□ -0.42
SF3B2-211ENST00000531041 CCDC28AQ8IWP9 274 aa12.42□□□□□ -0.42
SF3B2-211ENST00000531041 LINC00477Q96M19 166 aa12.42□□□□□ -0.42
SF3B2-211ENST00000531041 GNG13Q9P2W3 67 aa12.42□□□□□ -0.42
SF3B2-211ENST00000531041 EPDR1Q9UM22 224 aa12.42□□□□□ -0.42
SF3B2-211ENST00000531041 SERTM2A0A1B0GWG4 89 aa12.41□□□□□ -0.42
SF3B2-211ENST00000531041 TCRAP04437 139 aa12.41□□□□□ -0.42
SF3B2-211ENST00000531041 SBSPONQ8IVN8 264 aa12.41□□□□□ -0.42
SF3B2-211ENST00000531041 TCEAL7Q9BRU2 100 aa12.41□□□□□ -0.42
SF3B2-211ENST00000531041 AGPAT4-IT1Q9H0P7 198 aa12.41□□□□□ -0.42
SF3B2-211ENST00000531041 GIG44P09565 113 aaPredicted RBP12.4□□□□□ -0.42
SF3B2-211ENST00000531041 GNG5P63218 68 aa12.4□□□□□ -0.42
SF3B2-211ENST00000531041 ERCC8Q13216 396 aa12.4□□□□□ -0.42
SF3B2-211ENST00000531041 ODF3Q96PU9 254 aa12.4□□□□□ -0.42
SF3B2-211ENST00000531041 VGLL1Q99990 258 aa12.4□□□□□ -0.42
SF3B2-211ENST00000531041 ATG101Q9BSB4 218 aa12.4□□□□□ -0.42
SF3B2-211ENST00000531041 SLC35B3Q9H1N7 401 aa12.4□□□□□ -0.42
SF3B2-211ENST00000531041 RPH3ALQ9UNE2 315 aa12.4□□□□□ -0.42
SF3B2-211ENST00000531041 CA1P00915 261 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-211ENST00000531041 IFNA1P01562 189 aa12.39□□□□□ -0.43
SF3B2-211ENST00000531041 CT45A10P0DMU9 189 aa12.39□□□□□ -0.43
SF3B2-211ENST00000531041 ATP5G3P48201 142 aa12.39□□□□□ -0.43
SF3B2-211ENST00000531041 IFITM2Q01629 132 aa12.39□□□□□ -0.43
SF3B2-211ENST00000531041 TMEM78Q5T7P6 136 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms