RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 DOPEY1Q5JWR5 2465 aa4.32□□□□□ -1.72
PCF11-205ENST00000530906 DCHS1Q96JQ0 3298 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 ADGRG4Q8IZF6 3080 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 TRAV40A0A0B4J280 105 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 A0A0G2JLM5 398 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 OR2T8A6NH00 312 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 A8MWP6 167 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 IGHG2P01859 326 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 COX6B1P14854 86 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 PMCHP20382 165 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 BMI1P35226 326 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 RAB4BP61018 213 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 CTAG1AP78358 180 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 RIGQ13278 110 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 ECSCRQ19T08 205 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
PCF11-205ENST00000530906 KLF17Q5JT82 389 aaPredicted RBP4.31□□□□□ -1.72
PCF11-205ENST00000530906 FAM120AOSQ5T036 256 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 PRR27Q6MZM9 219 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 MRPL54Q6P161 138 aaKnown RBP4.31□□□□□ -1.72
PCF11-205ENST00000530906 LRRC75A-AS1Q8N1F1 130 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 TEX29Q8N6K0 151 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 SIGLECL1Q8N7X8 197 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 NHLRC2Q8NBF2 726 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 KCNS1Q96KK3 526 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 MS4A10Q96PG2 267 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 METTL26Q96S19 204 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 HSPB9Q9BQS6 159 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 PRDM13Q9H4Q3 707 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 PPP1R14DQ9NXH3 145 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 RPH3ALQ9UNE2 315 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 PSG8Q9UQ74 426 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 LENEPQ9Y5L5 61 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 ARHGAP32A7KAX9 2087 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 NBEAQ8NFP9 2946 aa4.31□□□□□ -1.72
PCF11-205ENST00000530906 A0A1B0GUT8 65 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 A6NDX4 124 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 NDUFA4O00483 81 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 BUB3O43684 328 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 SERF1AO75920 110 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 CLEC3BP05452 202 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 GPX1P07203 203 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 GPR183P32249 361 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 TCL1AP56279 114 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 LOXL1Q08397 574 aaPredicted RBP4.3□□□□□ -1.72
PCF11-205ENST00000530906 FHL2Q14192 279 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 PRNTQ86SH4 94 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
PCF11-205ENST00000530906 OR2D3Q8NGH3 330 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 PIFOQ8TCI5 191 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 CHCHD1Q96BP2 118 aaKnown RBP4.3□□□□□ -1.72
PCF11-205ENST00000530906 SAMD10Q9BYL1 202 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 GNB4Q9HAV0 340 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 BEX4Q9NWD9 120 aaPredicted RBP4.3□□□□□ -1.72
PCF11-205ENST00000530906 WNK2Q9Y3S1 2297 aa4.3□□□□□ -1.72
PCF11-205ENST00000530906 IGHV4-30-2A0A087WSY4 118 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 TRBV7-9A0A0J9YWB2 115 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 A0A1W2PS18 150 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 SH2D7A6NKC9 451 aaPredicted RBP4.29□□□□□ -1.72
PCF11-205ENST00000530906 ZNF785A8K8V0 405 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 CHEK1O14757 476 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 ZNF324O75467 553 aaPredicted RBP4.29□□□□□ -1.72
PCF11-205ENST00000530906 OR5AL1P0C617 328 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 SRIP30626 198 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 DEFA6Q01524 100 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 ZNF493Q6ZR52 646 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 C9orf139Q6ZV77 190 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 TMEM256Q8N2U0 113 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 C18orf32Q8TCD1 76 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 ZC2HC1AQ96GY0 325 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 PRR25Q96S07 402 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 ASCL2Q99929 193 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 ALKBH7Q9BT30 221 aaPredicted RBP4.29□□□□□ -1.72
PCF11-205ENST00000530906 NAGKQ9UJ70 344 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 TP53TG3Q9ULZ0 132 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 HRNRQ86YZ3 2850 aaPredicted RBP4.29□□□□□ -1.72
PCF11-205ENST00000530906 ABCA1O95477 2261 aa4.29□□□□□ -1.72
PCF11-205ENST00000530906 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.28□□□□□ -1.72
PCF11-205ENST00000530906 TRAV8-1A0A0A6YYK1 113 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 GRIFINA4D1Z8 144 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 LINC00587B1AMM8 73 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 F2Z2F3 143 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 G3V318 75 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 H3BTX0 84 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 H3BUX3 64 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 HSBP1O75506 76 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 SCGB1D1O95968 90 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 CA1P00915 261 aaPredicted RBP4.28□□□□□ -1.72
PCF11-205ENST00000530906 APOHP02749 345 aaPredicted RBP4.28□□□□□ -1.72
PCF11-205ENST00000530906 TRGV3P03979 118 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 DDTP30046 118 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 PPIFP30405 207 aaKnown RBP4.28□□□□□ -1.72
PCF11-205ENST00000530906 ARL3P36405 182 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 CTRLP40313 264 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 AMTP48728 403 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 HIST1H1AQ02539 215 aaPredicted RBP4.28□□□□□ -1.72
PCF11-205ENST00000530906 SLAQ13239 276 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 PMCHL1Q16048 86 aa4.28□□□□□ -1.72
PCF11-205ENST00000530906 PRSS57Q6UWY2 283 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms