RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 M0QXV9 152 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 DPM2O94777 84 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 FBXL15Q9H469 300 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 PLCE1Q9P212 2302 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 ZNF493Q6ZR52 646 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 PPP1R35Q8TAP8 253 aa11.19□□□□□ -0.62
PCF11-204ENST00000530660 MRPL35Q9NZE8 188 aaKnown RBP11.19□□□□□ -0.62
PCF11-204ENST00000530660 TAL2Q16559 108 aa11.18□□□□□ -0.62
PCF11-204ENST00000530660 SPRY4Q9C004 299 aa11.18□□□□□ -0.62
PCF11-204ENST00000530660 GP9P14770 177 aa11.18□□□□□ -0.62
PCF11-204ENST00000530660 IL11RAQ14626 422 aa11.18□□□□□ -0.62
PCF11-204ENST00000530660 TBC1D28Q2M2D7 210 aa11.18□□□□□ -0.62
PCF11-204ENST00000530660 C10orf55Q5SWW7 151 aa11.18□□□□□ -0.62
PCF11-204ENST00000530660 ZFHX4Q86UP3 3567 aa11.18□□□□□ -0.62
PCF11-204ENST00000530660 SAA1P0DJI8 122 aaPredicted RBP11.17□□□□□ -0.62
PCF11-204ENST00000530660 Q6ZS92 163 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 ZNRF1Q8ND25 227 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 C8orf46Q8TAG6 207 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 TMEM133Q9H2Q1 129 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 IGHV3-21A0A0B4J1V1 117 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 MAGEA5P43359 124 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 Q6ZQT7 251 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 ANKRD29Q8N6D5 301 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 IFITM1P13164 125 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 PRDX2P32119 198 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 PRR7Q8TB68 274 aa11.17□□□□□ -0.62
PCF11-204ENST00000530660 IGHV3OR15-7A0A075B7D8 119 aa11.16□□□□□ -0.62
PCF11-204ENST00000530660 SHISA9B4DS77 424 aa11.16□□□□□ -0.62
PCF11-204ENST00000530660 NDUFA3O95167 84 aa11.16□□□□□ -0.62
PCF11-204ENST00000530660 SNCGO76070 127 aa11.15□□□□□ -0.62
PCF11-204ENST00000530660 WT1-ASQ06250 92 aa11.15□□□□□ -0.62
PCF11-204ENST00000530660 MAP1LC3AQ9H492 121 aa11.15□□□□□ -0.62
PCF11-204ENST00000530660 ERHP84090 104 aaKnown RBP11.15□□□□□ -0.62
PCF11-204ENST00000530660 TWIST1Q15672 202 aa11.15□□□□□ -0.62
PCF11-204ENST00000530660 MEIG1Q5JSS6 88 aa11.15□□□□□ -0.62
PCF11-204ENST00000530660 PEAR1Q5VY43 1037 aaPredicted RBP11.15□□□□□ -0.62
PCF11-204ENST00000530660 RPEQ96AT9 228 aa11.15□□□□□ -0.62
PCF11-204ENST00000530660 C8orf49Q96NF6 230 aa11.15□□□□□ -0.62
PCF11-204ENST00000530660 TCL1BO95988 128 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 HLA-DRB4P13762 266 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 CALYQ9NYX4 217 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 HLA-DRB4X5D2U9 266 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 POU2AF1Q16633 256 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 CENPVL3A0A0U1RRI6 287 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 A8MWV9 139 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 IQCF6A8MYZ5 107 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 GATA1P15976 413 aaPredicted RBP11.14□□□□□ -0.63
PCF11-204ENST00000530660 KLF14Q8TD94 323 aaPredicted RBP11.14□□□□□ -0.63
PCF11-204ENST00000530660 SAP25Q8TEE9 199 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 C17orf77Q96MU5 243 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 NDUFA4L2Q9NRX3 87 aa11.14□□□□□ -0.63
PCF11-204ENST00000530660 KALRNO60229 2985 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 IGKV1D-17A0A075B6S4 117 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 TRAV8-2A0A0B4J237 113 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 THBDP07204 575 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 RAB9BQ9NP90 201 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 MSRB1Q9NZV6 116 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 PROCRQ9UNN8 238 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 TMEM262E9PQX1 116 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 PSMG4Q5JS54 123 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 PPP1R27Q86WC6 154 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 CADP27708 2225 aa11.13□□□□□ -0.63
PCF11-204ENST00000530660 MYMXA0A1B0GTQ4 84 aa11.12□□□□□ -0.63
PCF11-204ENST00000530660 NCBP2LA6PVI3 153 aaKnown RBP11.12□□□□□ -0.63
PCF11-204ENST00000530660 APELAP0DMC3 54 aa11.12□□□□□ -0.63
PCF11-204ENST00000530660 DSCAMO60469 2012 aa11.12□□□□□ -0.63
PCF11-204ENST00000530660 OTORQ9NRC9 128 aa11.12□□□□□ -0.63
PCF11-204ENST00000530660 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
PCF11-204ENST00000530660 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
PCF11-204ENST00000530660 ATP5IP56385 69 aaPredicted RBP11.11□□□□□ -0.63
PCF11-204ENST00000530660 THAP8Q8NA92 274 aa11.11□□□□□ -0.63
PCF11-204ENST00000530660 TTTY12Q9BZ98 90 aa11.11□□□□□ -0.63
PCF11-204ENST00000530660 RAB1BQ9H0U4 201 aa11.11□□□□□ -0.63
PCF11-204ENST00000530660 VCX2Q9H322 139 aa11.11□□□□□ -0.63
PCF11-204ENST00000530660 CTSZQ9UBR2 303 aa11.11□□□□□ -0.63
PCF11-204ENST00000530660 UBE2D3P61077 147 aa11.11□□□□□ -0.63
PCF11-204ENST00000530660 UBE2D2P62837 147 aa11.11□□□□□ -0.63
PCF11-204ENST00000530660 C17orf58Q2M2W7 97 aa11.11□□□□□ -0.63
PCF11-204ENST00000530660 HCP5Q6MZN7 132 aa11.11□□□□□ -0.63
PCF11-204ENST00000530660 CGB1A6NKQ9 187 aa11.1□□□□□ -0.63
PCF11-204ENST00000530660 LYZL6O75951 148 aa11.1□□□□□ -0.63
PCF11-204ENST00000530660 RASL11BQ9BPW5 248 aa11.1□□□□□ -0.63
PCF11-204ENST00000530660 M0R3E3 92 aa11.1□□□□□ -0.63
PCF11-204ENST00000530660 CXXC4Q9H2H0 198 aa11.1□□□□□ -0.63
PCF11-204ENST00000530660 ZNF71Q9NQZ8 489 aaPredicted RBP11.1□□□□□ -0.63
PCF11-204ENST00000530660 RPUSD1Q9UJJ7 312 aaKnown RBP11.1□□□□□ -0.63
PCF11-204ENST00000530660 FCN3O75636 299 aa11.09□□□□□ -0.63
PCF11-204ENST00000530660 ATP5LO75964 103 aa11.09□□□□□ -0.63
PCF11-204ENST00000530660 HOXB4P17483 251 aaPredicted RBP11.09□□□□□ -0.63
PCF11-204ENST00000530660 C3orf36Q3SXR2 165 aa11.09□□□□□ -0.63
PCF11-204ENST00000530660 PIP4P1Q86T03 277 aa11.09□□□□□ -0.63
PCF11-204ENST00000530660 TRGV9Q99603 122 aa11.09□□□□□ -0.63
PCF11-204ENST00000530660 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
PCF11-204ENST00000530660 LYZP61626 148 aa11.09□□□□□ -0.63
PCF11-204ENST00000530660 RAXQ9Y2V3 346 aa11.09□□□□□ -0.63
PCF11-204ENST00000530660 TIMM8AO60220 97 aaPredicted RBP11.08□□□□□ -0.64
PCF11-204ENST00000530660 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
PCF11-204ENST00000530660 DUX4L9Q6RFH8 374 aaPredicted RBP11.08□□□□□ -0.64
PCF11-204ENST00000530660 CRIP2P52943 208 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms