RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TMEM183BQ1AE95 376 aa10.94□□□□□ -0.66
TTC39A-216ENST00000530004 DPF1Q92782 380 aa10.94□□□□□ -0.66
TTC39A-216ENST00000530004 ISOC2Q96AB3 205 aa10.94□□□□□ -0.66
TTC39A-216ENST00000530004 ZNF331Q9NQX6 463 aaPredicted RBP10.94□□□□□ -0.66
TTC39A-216ENST00000530004 LY96Q9Y6Y9 160 aa10.94□□□□□ -0.66
TTC39A-216ENST00000530004 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 MT-ND4LP03901 98 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 IGFL4Q6B9Z1 124 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 GOLT1AQ6ZVE7 132 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 SGK494Q96LW2 274 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 RHPN1-AS1Q9BWJ2 59 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 SMPXQ9UHP9 88 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 KLF12Q9Y4X4 402 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 K7EN84 100 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 EDN2P20800 178 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 SYNJ2BPP57105 145 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 REC114Q7Z4M0 266 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 FMC1Q96HJ9 113 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 CTDSP1Q9GZU7 261 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 PRELID1Q9Y255 219 aa10.93□□□□□ -0.66
TTC39A-216ENST00000530004 TMEM213A2RRL7 107 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 DIRC3C9JPN6 131 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 CHEK1O14757 476 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 S100A9P06702 114 aaKnown RBP10.92□□□□□ -0.66
TTC39A-216ENST00000530004 PRB4P10163 310 aaPredicted RBP10.92□□□□□ -0.66
TTC39A-216ENST00000530004 HLA-DMBP28068 263 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 CSN1S1P47710 185 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 MEOX2P50222 304 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 BAGE2Q86Y30 109 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 SLC50A1Q9BRV3 221 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 TUBA4BQ9H853 241 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 TMEM242Q9NWH2 141 aa10.92□□□□□ -0.66
TTC39A-216ENST00000530004 A8MWP6 167 aa10.91□□□□□ -0.66
TTC39A-216ENST00000530004 LGALS9O00182 355 aa10.91□□□□□ -0.66
TTC39A-216ENST00000530004 IGLV2-8P01709 118 aa10.91□□□□□ -0.66
TTC39A-216ENST00000530004 OR5I1Q13606 314 aa10.91□□□□□ -0.66
TTC39A-216ENST00000530004 NHLRC2Q8NBF2 726 aa10.91□□□□□ -0.66
TTC39A-216ENST00000530004 SFRP2Q96HF1 295 aa10.91□□□□□ -0.66
TTC39A-216ENST00000530004 STAB1Q9NY15 2570 aa10.91□□□□□ -0.66
TTC39A-216ENST00000530004 TRAV8-1A0A0A6YYK1 113 aa10.9□□□□□ -0.66
TTC39A-216ENST00000530004 H7BYZ3 331 aa10.9□□□□□ -0.66
TTC39A-216ENST00000530004 K7EQM0 130 aa10.9□□□□□ -0.66
TTC39A-216ENST00000530004 M0QZ24 198 aa10.9□□□□□ -0.66
TTC39A-216ENST00000530004 PF4P02776 101 aa10.9□□□□□ -0.66
TTC39A-216ENST00000530004 MGST1P10620 155 aaKnown RBP10.9□□□□□ -0.66
TTC39A-216ENST00000530004 SLURP1P55000 103 aa10.9□□□□□ -0.66
TTC39A-216ENST00000530004 RPL11P62913 178 aaKnown RBP10.9□□□□□ -0.66
TTC39A-216ENST00000530004 C1QL4Q86Z23 238 aa10.9□□□□□ -0.66
TTC39A-216ENST00000530004 SPATA3Q8NHX4 192 aa10.9□□□□□ -0.66
TTC39A-216ENST00000530004 ANAPC16Q96DE5 110 aa10.9□□□□□ -0.66
TTC39A-216ENST00000530004 TRAV8-2A0A0B4J237 113 aa10.9□□□□□ -0.67
TTC39A-216ENST00000530004 BMI1P35226 326 aa10.9□□□□□ -0.67
TTC39A-216ENST00000530004 KLF5Q13887 457 aaPredicted RBP10.9□□□□□ -0.67
TTC39A-216ENST00000530004 RNF182Q8N6D2 247 aa10.9□□□□□ -0.67
TTC39A-216ENST00000530004 TMEM75Q8N9X5 138 aa10.9□□□□□ -0.67
TTC39A-216ENST00000530004 SELENOKQ9Y6D0 94 aa10.9□□□□□ -0.67
TTC39A-216ENST00000530004 CXorf65A6NEN9 183 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 GCGP01275 180 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 LTAP01374 205 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 IGLV2-11P01706 119 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 LCN12Q6JVE5 192 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 Q86TA4 180 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 FAM24BQ8N5W8 94 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 ARL6IP6Q8N6S5 226 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 C15orf54Q8N8G6 183 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 DLX4Q92988 240 aaPredicted RBP10.89□□□□□ -0.67
TTC39A-216ENST00000530004 C16orf92Q96LL3 132 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 URGCP-MRPS24S4R325 110 aa10.89□□□□□ -0.67
TTC39A-216ENST00000530004 IGKV2-40A0A087WW87 121 aaPredicted RBP10.88□□□□□ -0.67
TTC39A-216ENST00000530004 SERTM2A0A1B0GWG4 89 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 COLCA2A8K830 154 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 ZNF705FA8MVS1 300 aaPredicted RBP10.88□□□□□ -0.67
TTC39A-216ENST00000530004 IGKV2D-40P01614 121 aaPredicted RBP10.88□□□□□ -0.67
TTC39A-216ENST00000530004 ERVFC1-1P60608 527 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 PSG3Q16557 428 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 TCF24Q7RTU0 167 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 IGKV3-7A0A075B6H7 116 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 TRBV6-1A0A0K0K1D8 114 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 C2orf70A6NJV1 201 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 PPP1R2P9O14990 202 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 FLI1Q01543 452 aaPredicted RBP10.88□□□□□ -0.67
TTC39A-216ENST00000530004 LINC00482Q8N8I6 264 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 SMIM12Q96EX1 92 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 NRN1Q9NPD7 142 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 PSG8Q9UQ74 426 aa10.88□□□□□ -0.67
TTC39A-216ENST00000530004 TMA7Q9Y2S6 64 aaKnown RBP10.88□□□□□ -0.67
TTC39A-216ENST00000530004 CBLN1P23435 193 aa10.87□□□□□ -0.67
TTC39A-216ENST00000530004 ELOBQ15370 118 aa10.87□□□□□ -0.67
TTC39A-216ENST00000530004 YPEL4Q96NS1 127 aa10.87□□□□□ -0.67
TTC39A-216ENST00000530004 MLST8Q9BVC4 326 aa10.87□□□□□ -0.67
TTC39A-216ENST00000530004 RNASE7Q9H1E1 156 aaKnown RBP10.87□□□□□ -0.67
TTC39A-216ENST00000530004 PRAC2D3DTV9 90 aa10.86□□□□□ -0.67
TTC39A-216ENST00000530004 SOCS3O14543 225 aa10.86□□□□□ -0.67
TTC39A-216ENST00000530004 PRR27Q6MZM9 219 aa10.86□□□□□ -0.67
TTC39A-216ENST00000530004 MRPL53Q96EL3 112 aaKnown RBP10.86□□□□□ -0.67
TTC39A-216ENST00000530004 CLEC5AQ9NY25 188 aa10.86□□□□□ -0.67
TTC39A-216ENST00000530004 OVOL1O14753 267 aa10.85□□□□□ -0.67
TTC39A-216ENST00000530004 FOLR2P14207 255 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms