RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
PACS1-209ENST00000529757 NRN1Q9NPD7 142 aa12.6□□□□□ -0.39
PACS1-209ENST00000529757 PRELID1Q9Y255 219 aa12.6□□□□□ -0.39
PACS1-209ENST00000529757 SETD2Q9BYW2 2564 aaPredicted RBP12.59□□□□□ -0.39
PACS1-209ENST00000529757 C2CD3Q4AC94 2353 aa12.59□□□□□ -0.39
PACS1-209ENST00000529757 TRAV8-2A0A0B4J237 113 aa12.59□□□□□ -0.39
PACS1-209ENST00000529757 HLA-DMBP28068 263 aa12.59□□□□□ -0.39
PACS1-209ENST00000529757 KRTAP10-3P60369 221 aa12.59□□□□□ -0.39
PACS1-209ENST00000529757 OCC1Q8TAD7 63 aa12.59□□□□□ -0.39
PACS1-209ENST00000529757 C16orf92Q96LL3 132 aa12.59□□□□□ -0.39
PACS1-209ENST00000529757 CLEC5AQ9NY25 188 aa12.59□□□□□ -0.39
PACS1-209ENST00000529757 NIPBLQ6KC79 2804 aaeCLIP12.58□□□□□ -0.39
PACS1-209ENST00000529757 SERTM2A0A1B0GWG4 89 aa12.58□□□□□ -0.4
PACS1-209ENST00000529757 ADARB2-AS1A8MUL3 147 aa12.58□□□□□ -0.4
PACS1-209ENST00000529757 NDUFA11Q86Y39 141 aa12.58□□□□□ -0.4
PACS1-209ENST00000529757 AURKAIP1Q9NWT8 199 aaPredicted RBP12.58□□□□□ -0.4
PACS1-209ENST00000529757 BTN1A1Q13410 526 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 NSUN5P1Q3KNT7 163 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 LCN12Q6JVE5 192 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 BAGE2Q86Y30 109 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 RNF182Q8N6D2 247 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 TMEM75Q8N9X5 138 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 MRPL53Q96EL3 112 aaKnown RBP12.57□□□□□ -0.4
PACS1-209ENST00000529757 SGK494Q96LW2 274 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 IGKV3-7A0A075B6H7 116 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 A0A087WWC5 75 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 SOCS3O14543 225 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 SAMD13Q5VXD3 122 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 ADAMTSL5Q6ZMM2 481 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 ISOC2Q96AB3 205 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 MLXQ9UH92 298 aa12.57□□□□□ -0.4
PACS1-209ENST00000529757 TRAV8-1A0A0A6YYK1 113 aa12.56□□□□□ -0.4
PACS1-209ENST00000529757 TRBV6-1A0A0K0K1D8 114 aa12.56□□□□□ -0.4
PACS1-209ENST00000529757 ZNF705FA8MVS1 300 aaPredicted RBP12.56□□□□□ -0.4
PACS1-209ENST00000529757 TSPAN4O14817 238 aa12.56□□□□□ -0.4
PACS1-209ENST00000529757 K7EN84 100 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 LTAP01374 205 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 IGLV2-11P01706 119 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 IGLV2-8P01709 118 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 MT-ND4LP03901 98 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 CSN3P07498 182 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 PRB4P10163 310 aaPredicted RBP12.55□□□□□ -0.4
PACS1-209ENST00000529757 FLI1Q01543 452 aaPredicted RBP12.55□□□□□ -0.4
PACS1-209ENST00000529757 PSG3Q16557 428 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 RNF212Q495C1 297 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 Q86TA4 180 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 SMIM12Q96EX1 92 aa12.55□□□□□ -0.4
PACS1-209ENST00000529757 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
PACS1-209ENST00000529757 DNASE2O00115 360 aaPredicted RBP12.54□□□□□ -0.4
PACS1-209ENST00000529757 OVOL1O14753 267 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
PACS1-209ENST00000529757 PRNTQ86SH4 94 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 CBLN2Q8IUK8 224 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 NHLRC2Q8NBF2 726 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 SMCO4Q9NRQ5 59 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 FBLL1A6NHQ2 334 aaKnown RBP12.54□□□□□ -0.4
PACS1-209ENST00000529757 MGST1P10620 155 aaKnown RBP12.54□□□□□ -0.4
PACS1-209ENST00000529757 ID1P41134 155 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 GBGT1Q8N5D6 347 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 DCANP1Q8TF63 244 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 CTDSP1Q9GZU7 261 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 MS4A6AQ9H2W1 248 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 PSG8Q9UQ74 426 aa12.54□□□□□ -0.4
PACS1-209ENST00000529757 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
PACS1-209ENST00000529757 GCGP01275 180 aa12.53□□□□□ -0.4
PACS1-209ENST00000529757 ZNF738Q8NE65 137 aa12.53□□□□□ -0.4
PACS1-209ENST00000529757 DYNLRB2Q8TF09 96 aa12.53□□□□□ -0.4
PACS1-209ENST00000529757 SFRP2Q96HF1 295 aa12.53□□□□□ -0.4
PACS1-209ENST00000529757 C20orf173Q96LM9 149 aa12.53□□□□□ -0.4
PACS1-209ENST00000529757 RBAKDNA6NC62 111 aa12.52□□□□□ -0.4
PACS1-209ENST00000529757 OR5I1Q13606 314 aa12.52□□□□□ -0.4
PACS1-209ENST00000529757 WFDC3Q8IUB2 231 aa12.52□□□□□ -0.4
PACS1-209ENST00000529757 ANAPC16Q96DE5 110 aa12.52□□□□□ -0.4
PACS1-209ENST00000529757 MLST8Q9BVC4 326 aa12.52□□□□□ -0.4
PACS1-209ENST00000529757 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.4
PACS1-209ENST00000529757 ZFP30Q9Y2G7 519 aa12.52□□□□□ -0.4
PACS1-209ENST00000529757 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 TMEM183AQ8IXX5 376 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 VGLL1Q99990 258 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 JMJD1CQ15652 2540 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 H7BYZ3 331 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 K7EQG2 157 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 PPP1R2P9O14990 202 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 TFPI2P48307 235 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 TUBA4BQ9H853 241 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 SIGLEC8Q9NYZ4 499 aa12.51□□□□□ -0.41
PACS1-209ENST00000529757 TEP1Q99973 2627 aaKnown RBP12.5□□□□□ -0.41
PACS1-209ENST00000529757 MAST4O15021 2626 aa12.5□□□□□ -0.41
PACS1-209ENST00000529757 ERVFC1-1P60608 527 aa12.5□□□□□ -0.41
PACS1-209ENST00000529757 DEFB114Q30KQ6 69 aa12.5□□□□□ -0.41
PACS1-209ENST00000529757 RBPMS2Q6ZRY4 209 aaKnown RBP12.5□□□□□ -0.41
PACS1-209ENST00000529757 C15orf54Q8N8G6 183 aa12.5□□□□□ -0.41
PACS1-209ENST00000529757 OR10G8Q8NGN5 311 aa12.5□□□□□ -0.41
PACS1-209ENST00000529757 CITED1Q99966 193 aa12.5□□□□□ -0.41
PACS1-209ENST00000529757 BIN3Q9NQY0 253 aa12.5□□□□□ -0.41
PACS1-209ENST00000529757 CXorf65A6NEN9 183 aa12.49□□□□□ -0.41
PACS1-209ENST00000529757 SNRPD3P62318 126 aaKnown RBP12.49□□□□□ -0.41
PACS1-209ENST00000529757 PRR27Q6MZM9 219 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms