RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PRSS3P35030 304 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 G6PCP35575 357 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 LPAR6P43657 344 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 RPL5P46777 297 aaKnown RBP3.09□□□□□ -1.91
CSDE1-212ENST00000529046 FXYD4P59646 89 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 HSPE1P61604 102 aaKnown RBP3.09□□□□□ -1.91
CSDE1-212ENST00000529046 ERHP84090 104 aaKnown RBP3.09□□□□□ -1.91
CSDE1-212ENST00000529046 PRCDQ00LT1 54 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 VAMP3Q15836 100 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 DEFB135Q30KP9 77 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 C2orf83Q53S99 150 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 UBE2NLQ5JXB2 153 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 IDNKQ5T6J7 187 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 INO80EQ8NBZ0 244 aaPredicted RBP3.09□□□□□ -1.91
CSDE1-212ENST00000529046 OR5H2Q8NGV7 314 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 SLC35E1Q96K37 410 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 RNF2Q99496 336 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 ATP5SQ99766 215 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 GINS3Q9BRX5 216 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 OR51M1Q9H341 326 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 IFT46Q9NQC8 304 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 CACFD1Q9UGQ2 172 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 S4R3C0 116 aa3.09□□□□□ -1.91
CSDE1-212ENST00000529046 HERC2O95714 4834 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 TRAV30A0A087WSZ9 112 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 SMIM31A0A1B0GVY4 71 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 ANKRD65E5RJM6 399 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 H0Y9J4 135 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 ZNF861PO60384 105 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 TSPAN13O95857 204 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 MT-CO2P00403 227 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 IGKV1-39P01597 117 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 IGKV1D-39P04432 117 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 IFNA4P05014 189 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 PTHLHP12272 177 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 MIFP14174 115 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 TBPP20226 339 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 NPPCP23582 126 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 CRYBB3P26998 211 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 RCVRNP35243 200 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 SUB1P53999 127 aaKnown RBP eCLIP3.08□□□□□ -1.924e-8■■■□□ 15.4
CSDE1-212ENST00000529046 TAS2R20P59543 309 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 CTAG1AP78358 180 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 MXD1Q05195 221 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 BSXQ3C1V8 233 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 Q56UQ5 140 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 TMEM69Q5SWH9 247 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 GPR107Q5VW38 600 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 MORN3Q6PF18 240 aaPredicted RBP3.08□□□□□ -1.92
CSDE1-212ENST00000529046 TOMM20LQ6UXN7 152 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 LINC00336Q6ZUF6 198 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 Q6ZVH6 145 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 ARRDC1Q8N5I2 433 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 OR4X1Q8NH49 305 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 OR52E5Q8NH55 327 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 C15orf40Q8WUR7 153 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 SLC25A46Q96AG3 418 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 LINC00167Q96N53 147 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 MS4A6AQ9H2W1 248 aa3.08□□□□□ -1.92
CSDE1-212ENST00000529046 TRAV6A0A075B6T7 132 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 GNG7O60262 68 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 HSBP1O75506 76 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 YIF1AO95070 293 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 ATP6V1G2O95670 118 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 PMP2P02689 132 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 EIF4EP06730 217 aaKnown RBP3.07□□□□□ -1.92
CSDE1-212ENST00000529046 PMCHP20382 165 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 HRH1P35367 487 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 SNCAP37840 140 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 EIF2B2P49770 351 aaKnown RBP3.07□□□□□ -1.92
CSDE1-212ENST00000529046 AP2S1P53680 142 aaPredicted RBP3.07□□□□□ -1.92
CSDE1-212ENST00000529046 YPEL3P61236 119 aaPredicted RBP3.07□□□□□ -1.92
CSDE1-212ENST00000529046 NUTF2P61970 127 aaKnown RBP3.07□□□□□ -1.92
CSDE1-212ENST00000529046 TSPAN5P62079 268 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 SOHLH1Q5JUK2 328 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 TCF24Q7RTU0 167 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 LHFPL1Q86WI0 220 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 APRG1Q8IVJ8 170 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 SELENOHQ8IZQ5 122 aaKnown RBP3.07□□□□□ -1.92
CSDE1-212ENST00000529046 RPP25LQ8N5L8 163 aaKnown RBP3.07□□□□□ -1.92
CSDE1-212ENST00000529046 Q8NAQ8 132 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 UBAC2Q8NBM4 344 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 OR11H2Q8NH07 326 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 ZFAND1Q8TCF1 268 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 DCANP1Q8TF63 244 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 MRGPRFQ96AM1 343 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 YIPF6Q96EC8 236 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 FXYD6Q9H0Q3 95 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 RNF167Q9H6Y7 350 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 APLNQ9ULZ1 77 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 KCNIP3Q9Y2W7 256 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
CSDE1-212ENST00000529046 A0A087WXM4 84 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 SMIM9A6NGZ8 99 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 DNASE2O00115 360 aaPredicted RBP3.06□□□□□ -1.92
CSDE1-212ENST00000529046 ZNF207O43670 478 aaKnown RBP3.06□□□□□ -1.92
CSDE1-212ENST00000529046 NDUFS6O75380 124 aaKnown RBP3.06□□□□□ -1.92
CSDE1-212ENST00000529046 CDS2O95674 445 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 IGKV1-17P01599 117 aa3.06□□□□□ -1.92
CSDE1-212ENST00000529046 CD74P04233 296 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms