RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 TET2Q6N021 2002 aaPredicted RBP3.79□□□□□ -1.8
CD44-230ENST00000528922 NBPF19A0A087WUL8 3843 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 IGHV3-43A0A0B4J1X8 118 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 TRBV6-1A0A0K0K1D8 114 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 TCRBV4S1A1TA0A5B7 111 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 DEFB108AA8MXU0 73 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 OR2J3O76001 311 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 SAA2P0DJI9 122 aaPredicted RBP3.78□□□□□ -1.8
CD44-230ENST00000528922 IGHV3-43DP0DP04 118 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 MGST1P10620 155 aaKnown RBP3.78□□□□□ -1.8
CD44-230ENST00000528922 ZNF25P17030 456 aaPredicted RBP3.78□□□□□ -1.8
CD44-230ENST00000528922 NPPCP23582 126 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 CRYBB3P26998 211 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 RPS20P60866 119 aaKnown RBP3.78□□□□□ -1.8
CD44-230ENST00000528922 TNFAIP6P98066 277 aaPredicted RBP3.78□□□□□ -1.8
CD44-230ENST00000528922 SPATA45Q537H7 98 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 LRRC10Q5BKY1 277 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 TPTE2P1Q5T6R2 138 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 HES3Q5TGS1 186 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 C12orf54Q6X4T0 127 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 ZNF826PQ6ZT77 177 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 OR8I2Q8N0Y5 310 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 LYPD1Q8N2G4 141 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 C5orf17Q8NAS9 161 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 ZNF439Q8NDP4 499 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 ZNF738Q8NE65 137 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 VN1R17PQ8TDU5 208 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 ORAOV1Q8WV07 137 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 CYYR1Q96J86 154 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 GPR82Q96P67 336 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 TRGV9Q99603 122 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 CHCHD5Q9BSY4 110 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 PAXXQ9BUH6 204 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 HINT2Q9BX68 163 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 SNHG12Q9BXW3 62 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 HES7Q9BYE0 225 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 MS4A6AQ9H2W1 248 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 ST20Q9HBF5 79 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 NRN1Q9NPD7 142 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 ZNF492Q9P255 531 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 HSPB8Q9UJY1 196 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 WASHC3Q9Y3C0 194 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 SPG11Q96JI7 2443 aa3.78□□□□□ -1.8
CD44-230ENST00000528922 TRAV30A0A087WSZ9 112 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 TRAV9-2A0A087WT02 112 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 IGHV1-18A0A0C4DH31 117 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 TEX50A0A1B0GTY4 177 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 K7EQG2 157 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 PEX7O00628 323 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 NDUFB3O43676 98 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 FSTL3O95633 263 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 P01737 135 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 RBP4P02753 201 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 SFTPCP11686 197 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 CBLN1P23435 193 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 FCGR2BP31994 310 aaPredicted RBP3.77□□□□□ -1.81
CD44-230ENST00000528922 CSN1S1P47710 185 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 PLP1P60201 277 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 KRTDAPP60985 99 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 HBBP68871 147 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 CLEC12BQ2HXU8 276 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 C17orf58Q2M2W7 97 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 ALKBH6Q3KRA9 238 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 RPL39P5Q59GN2 51 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 IGFL3Q6UXB1 125 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 Q6ZR03 302 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 TMEM136Q6ZRR5 245 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 ZNF833PQ6ZTB9 187 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 OR9G1Q8NH87 305 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 UBALD1Q8TB05 177 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 ZNF596Q8TC21 504 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 C5orf30Q96GV9 206 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 NDUFA4L2Q9NRX3 87 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 TNFRSF19Q9NS68 423 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 CBLN4Q9NTU7 201 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 DCAF16Q9NXF7 216 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 LAMTOR2Q9Y2Q5 125 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 KLF12Q9Y4X4 402 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 YTHDF2Q9Y5A9 579 aaKnown RBP3.77□□□□□ -1.81
CD44-230ENST00000528922 SETD2Q9BYW2 2564 aaPredicted RBP3.77□□□□□ -1.81
CD44-230ENST00000528922 DYSFO75923 2080 aa3.77□□□□□ -1.81
CD44-230ENST00000528922 TRBV20OR9-2A0A075B6H5 130 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 PPIAL4EA0A075B759 164 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 PPIAL4DF5H284 164 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 K7EN84 100 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 M0R1B8 84 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 M0R2Z0 102 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 CHEK1O14757 476 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 CRXO43186 299 aaPredicted RBP3.76□□□□□ -1.81
CD44-230ENST00000528922 DSCAMO60469 2012 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 HYPMO75409 117 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 HLA-DRB1P01911 266 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 SLC25A5P05141 298 aaKnown RBP3.76□□□□□ -1.81
CD44-230ENST00000528922 PPIAL4FP0DN26 164 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 RNASE2P10153 161 aaKnown RBP3.76□□□□□ -1.81
CD44-230ENST00000528922 SRIP30626 198 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 CEBPDP49716 269 aaPredicted RBP3.76□□□□□ -1.81
CD44-230ENST00000528922 CCL11P51671 97 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 ZNF137PP52743 207 aa3.76□□□□□ -1.81
CD44-230ENST00000528922 MFAP2P55001 183 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms