RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 AMBPP02760 352 aa12.97□□□□□ -0.33
TRIM3-205ENST00000527237 C2CD4CQ8TF44 421 aa12.97□□□□□ -0.33
TRIM3-205ENST00000527237 BLNKQ8WV28 456 aa12.97□□□□□ -0.33
TRIM3-205ENST00000527237 TMEM208Q9BTX3 173 aa12.97□□□□□ -0.33
TRIM3-205ENST00000527237 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
TRIM3-205ENST00000527237 ZNF705GA8MUZ8 300 aaPredicted RBP12.96□□□□□ -0.33
TRIM3-205ENST00000527237 GUK1Q16774 197 aa12.96□□□□□ -0.33
TRIM3-205ENST00000527237 Q5BKY6 102 aa12.96□□□□□ -0.33
TRIM3-205ENST00000527237 FFAR4Q5NUL3 377 aa12.96□□□□□ -0.33
TRIM3-205ENST00000527237 FAM222AQ5U5X8 452 aa12.96□□□□□ -0.33
TRIM3-205ENST00000527237 KCNIP2Q9NS61 270 aa12.96□□□□□ -0.33
TRIM3-205ENST00000527237 PLA2G2EQ9NZK7 142 aa12.96□□□□□ -0.33
TRIM3-205ENST00000527237 YTHDF2Q9Y5A9 579 aaKnown RBP12.96□□□□□ -0.33
TRIM3-205ENST00000527237 TRAV10A0A0B4J240 114 aa12.95□□□□□ -0.34
TRIM3-205ENST00000527237 IGLL5B9A064 214 aa12.95□□□□□ -0.34
TRIM3-205ENST00000527237 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
TRIM3-205ENST00000527237 C17orf112F2Z3M2 114 aa12.95□□□□□ -0.34
TRIM3-205ENST00000527237 OR10J4P0C629 311 aa12.95□□□□□ -0.34
TRIM3-205ENST00000527237 HIST1H1EP10412 219 aaKnown RBP12.95□□□□□ -0.34
TRIM3-205ENST00000527237 RRN3P1Q2M238 152 aa12.95□□□□□ -0.34
TRIM3-205ENST00000527237 EXOC3-AS1Q8N2X6 119 aa12.95□□□□□ -0.34
TRIM3-205ENST00000527237 RPP25LQ8N5L8 163 aaKnown RBP12.95□□□□□ -0.34
TRIM3-205ENST00000527237 PPP1R14DQ9NXH3 145 aa12.95□□□□□ -0.34
TRIM3-205ENST00000527237 DKK2Q9UBU2 259 aa12.95□□□□□ -0.34
TRIM3-205ENST00000527237 TMEM189A5PLL7 270 aa12.94□□□□□ -0.34
TRIM3-205ENST00000527237 ZNF253O75346 499 aa12.94□□□□□ -0.34
TRIM3-205ENST00000527237 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
TRIM3-205ENST00000527237 ZNF503Q96F45 646 aa12.94□□□□□ -0.34
TRIM3-205ENST00000527237 MRPL32Q9BYC8 188 aaKnown RBP12.94□□□□□ -0.34
TRIM3-205ENST00000527237 APLNQ9ULZ1 77 aa12.94□□□□□ -0.34
TRIM3-205ENST00000527237 FUT9Q9Y231 359 aa12.94□□□□□ -0.34
TRIM3-205ENST00000527237 NPIPB6E9PJ23 425 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 J3KRW8 73 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 IFNA5P01569 189 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 AZU1P20160 251 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 CDKN1BP46527 198 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 ERCC8Q13216 396 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 SCGB1C1Q8TD33 95 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 FXYD5Q96DB9 178 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 PHYHIPLQ96FC7 376 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 TIMM9Q9Y5J7 89 aa12.93□□□□□ -0.34
TRIM3-205ENST00000527237 IGHV4-4A0A075B6R2 117 aa12.92□□□□□ -0.34
TRIM3-205ENST00000527237 DEFB131BA0A096LNP1 70 aa12.92□□□□□ -0.34
TRIM3-205ENST00000527237 PLAC8L1A1L4L8 177 aa12.92□□□□□ -0.34
TRIM3-205ENST00000527237 SPART-AS1P0CW21 52 aa12.92□□□□□ -0.34
TRIM3-205ENST00000527237 CT45A10P0DMU9 189 aa12.92□□□□□ -0.34
TRIM3-205ENST00000527237 RGS21Q2M5E4 152 aa12.92□□□□□ -0.34
TRIM3-205ENST00000527237 GFI1BQ5VTD9 330 aa12.92□□□□□ -0.34
TRIM3-205ENST00000527237 OR51M1Q9H341 326 aa12.92□□□□□ -0.34
TRIM3-205ENST00000527237 VPS13DQ5THJ4 4388 aa12.92□□□□□ -0.34
TRIM3-205ENST00000527237 DNAH6Q9C0G6 4158 aa12.91□□□□□ -0.34
TRIM3-205ENST00000527237 OR7C2O60412 319 aa12.91□□□□□ -0.34
TRIM3-205ENST00000527237 GIPP09681 153 aaPredicted RBP12.91□□□□□ -0.34
TRIM3-205ENST00000527237 PDE6HQ13956 83 aa12.91□□□□□ -0.34
TRIM3-205ENST00000527237 ICAM4Q14773 271 aa12.91□□□□□ -0.34
TRIM3-205ENST00000527237 MRPL53Q96EL3 112 aaKnown RBP12.91□□□□□ -0.34
TRIM3-205ENST00000527237 PAXXQ9BUH6 204 aa12.91□□□□□ -0.34
TRIM3-205ENST00000527237 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.34
TRIM3-205ENST00000527237 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.34
TRIM3-205ENST00000527237 NBEAP1P0C6P0 100 aa12.9□□□□□ -0.34
TRIM3-205ENST00000527237 RAB2AP61019 212 aa12.9□□□□□ -0.34
TRIM3-205ENST00000527237 OXA1LQ15070 435 aa12.9□□□□□ -0.34
TRIM3-205ENST00000527237 FAM122CQ6P4D5 195 aa12.9□□□□□ -0.34
TRIM3-205ENST00000527237 AQP10Q96PS8 301 aa12.9□□□□□ -0.34
TRIM3-205ENST00000527237 LINC01587Q99440 93 aa12.9□□□□□ -0.34
TRIM3-205ENST00000527237 NIPSNAP3BQ9BS92 247 aa12.9□□□□□ -0.34
TRIM3-205ENST00000527237 NACAE9PAV3 2078 aa12.89□□□□□ -0.35
TRIM3-205ENST00000527237 HTN1P15515 57 aa12.89□□□□□ -0.35
TRIM3-205ENST00000527237 UBE2L3P68036 154 aaKnown RBP12.89□□□□□ -0.35
TRIM3-205ENST00000527237 LGALS9CQ6DKI2 356 aa12.89□□□□□ -0.35
TRIM3-205ENST00000527237 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
TRIM3-205ENST00000527237 PRELID1Q9Y255 219 aa12.89□□□□□ -0.35
TRIM3-205ENST00000527237 G3V3Q6 166 aa12.88□□□□□ -0.35
TRIM3-205ENST00000527237 HTN3P15516 51 aa12.88□□□□□ -0.35
TRIM3-205ENST00000527237 TMEM256Q8N2U0 113 aa12.88□□□□□ -0.35
TRIM3-205ENST00000527237 HSD17B11Q8NBQ5 300 aa12.88□□□□□ -0.35
TRIM3-205ENST00000527237 ODF3Q96PU9 254 aa12.88□□□□□ -0.35
TRIM3-205ENST00000527237 AAMDCQ9H7C9 122 aa12.88□□□□□ -0.35
TRIM3-205ENST00000527237 FXYD6-FXYD2A0A087WZ82 144 aa12.87□□□□□ -0.35
TRIM3-205ENST00000527237 TRAV12-3A0A0B4J271 114 aa12.87□□□□□ -0.35
TRIM3-205ENST00000527237 TEX48A0A1B0GUV7 120 aa12.87□□□□□ -0.35
TRIM3-205ENST00000527237 RNF222A6NCQ9 220 aa12.87□□□□□ -0.35
TRIM3-205ENST00000527237 TSPOP30536 169 aa12.87□□□□□ -0.35
TRIM3-205ENST00000527237 KHDC3LQ587J8 217 aa12.87□□□□□ -0.35
TRIM3-205ENST00000527237 VGLL1Q99990 258 aa12.87□□□□□ -0.35
TRIM3-205ENST00000527237 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
TRIM3-205ENST00000527237 HMGB3O15347 200 aaKnown RBP12.86□□□□□ -0.35
TRIM3-205ENST00000527237 LEPP41159 167 aa12.86□□□□□ -0.35
TRIM3-205ENST00000527237 TCTAP57738 103 aa12.86□□□□□ -0.35
TRIM3-205ENST00000527237 TAS2R60P59551 318 aa12.86□□□□□ -0.35
TRIM3-205ENST00000527237 DAD1P61803 113 aa12.86□□□□□ -0.35
TRIM3-205ENST00000527237 BTN1A1Q13410 526 aa12.86□□□□□ -0.35
TRIM3-205ENST00000527237 OR2T35Q8NGX2 323 aa12.86□□□□□ -0.35
TRIM3-205ENST00000527237 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
TRIM3-205ENST00000527237 FAM19A4Q96LR4 140 aa12.86□□□□□ -0.35
TRIM3-205ENST00000527237 SH3BGRL3Q9H299 93 aa12.86□□□□□ -0.35
TRIM3-205ENST00000527237 Q9H3A6 140 aa12.86□□□□□ -0.35
TRIM3-205ENST00000527237 EPPK1P58107 5090 aaKnown RBP12.86□□□□□ -0.35
TRIM3-205ENST00000527237 M6PRP20645 277 aa12.85□□□□□ -0.35
TRIM3-205ENST00000527237 ACOT6Q3I5F7 207 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms