RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
CCDC90B-203ENST00000525503 TPPP3Q9BW30 176 aa12.82□□□□□ -0.36
CCDC90B-203ENST00000525503 TRBV7-1A0A0A6YYK4 115 aa12.82□□□□□ -0.36
CCDC90B-203ENST00000525503 M0QZ24 198 aa12.82□□□□□ -0.36
CCDC90B-203ENST00000525503 IGHV4-39P01824 125 aa12.82□□□□□ -0.36
CCDC90B-203ENST00000525503 PRB4P10163 310 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-203ENST00000525503 BMI1P35226 326 aa12.82□□□□□ -0.36
CCDC90B-203ENST00000525503 C5orf56Q8N8D9 126 aa12.82□□□□□ -0.36
CCDC90B-203ENST00000525503 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
CCDC90B-203ENST00000525503 NBASA2RRP1 2371 aa12.81□□□□□ -0.36
CCDC90B-203ENST00000525503 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
CCDC90B-203ENST00000525503 IGLC3P0DOY3 106 aa12.81□□□□□ -0.36
CCDC90B-203ENST00000525503 ZNF493Q6ZR52 646 aa12.81□□□□□ -0.36
CCDC90B-203ENST00000525503 CLEC5AQ9NY25 188 aa12.81□□□□□ -0.36
CCDC90B-203ENST00000525503 LEPROTL1O95214 131 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 PAX8Q06710 450 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 IGHV3-35A0A0C4DH35 117 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 TCAPO15273 167 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 IGHG4P01861 327 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 CLEC19AQ6UXS0 136 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 ATOH7Q8N100 152 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 PIMREGQ9BSJ6 248 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 MOB4Q9Y3A3 225 aa12.8□□□□□ -0.36
CCDC90B-203ENST00000525503 G3V318 75 aa12.79□□□□□ -0.36
CCDC90B-203ENST00000525503 BUB3O43684 328 aa12.79□□□□□ -0.36
CCDC90B-203ENST00000525503 RPLP1P05386 114 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-203ENST00000525503 SRSF2Q01130 221 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-203ENST00000525503 CCDC140Q96MF4 163 aa12.79□□□□□ -0.36
CCDC90B-203ENST00000525503 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
CCDC90B-203ENST00000525503 VGLL1Q99990 258 aa12.79□□□□□ -0.36
CCDC90B-203ENST00000525503 SLC50A1Q9BRV3 221 aa12.79□□□□□ -0.36
CCDC90B-203ENST00000525503 IGHV3OR16-8A0A075B7F1 116 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 TMSB15BA0A087X1C1 80 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 Q6ZN92 141 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 HSPB8Q9UJY1 196 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 IGHV1-69DA0A0B4J2H0 117 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 RBAKDNA6NC62 111 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 LINC01548A6NM66 108 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 SYS1-DBNDD2H3BUS1 97 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 IGHV1-69P01742 117 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 ATP5G2Q06055 141 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 IGFL4Q6B9Z1 124 aa12.78□□□□□ -0.36
CCDC90B-203ENST00000525503 COL6A6A6NMZ7 2263 aa12.77□□□□□ -0.36
CCDC90B-203ENST00000525503 HLA-DMBP28068 263 aa12.77□□□□□ -0.37
CCDC90B-203ENST00000525503 HNRNPA3P51991 378 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-203ENST00000525503 Q8TAT8 98 aa12.77□□□□□ -0.37
CCDC90B-203ENST00000525503 METTL26Q96S19 204 aa12.77□□□□□ -0.37
CCDC90B-203ENST00000525503 MAP1LC3CQ9BXW4 147 aa12.77□□□□□ -0.37
CCDC90B-203ENST00000525503 ITPR1Q14643 2758 aa12.77□□□□□ -0.37
CCDC90B-203ENST00000525503 CLPSL1A2RUU4 121 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 FAM223BA6NKX1 122 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 CSN3P07498 182 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 ZNF138P52744 262 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 FA2HQ7L5A8 372 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 FAM223AQ8IWN6 122 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 AP5S1Q9NUS5 200 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 TRAV41A0A0B4J266 112 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 NDUFS8O00217 210 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 CRIP2P52943 208 aaPredicted RBP12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 FAM104BQ5XKR9 115 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 TMEM219Q86XT9 240 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 FER1L6-AS1Q8NA97 138 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 PRSS3P2Q8NHM4 247 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 CCL19Q99731 98 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 U3KQK5 164 aa12.76□□□□□ -0.37
CCDC90B-203ENST00000525503 OR4C46A6NHA9 309 aa12.75□□□□□ -0.37
CCDC90B-203ENST00000525503 FABP5P3A8MUU1 101 aa12.75□□□□□ -0.37
CCDC90B-203ENST00000525503 ZNF80P51504 273 aaPredicted RBP12.75□□□□□ -0.37
CCDC90B-203ENST00000525503 MAJINQ3KP22 176 aa12.75□□□□□ -0.37
CCDC90B-203ENST00000525503 PET117Q6UWS5 81 aa12.75□□□□□ -0.37
CCDC90B-203ENST00000525503 SPATA12Q7Z6I5 190 aa12.75□□□□□ -0.37
CCDC90B-203ENST00000525503 TMEM191AQ9H0A3 160 aa12.75□□□□□ -0.37
CCDC90B-203ENST00000525503 HIVEP3Q5T1R4 2406 aa12.75□□□□□ -0.37
CCDC90B-203ENST00000525503 TMEM213A2RRL7 107 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 BATFQ16520 125 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 C19orf54Q5BKX5 351 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 MRPL53Q96EL3 112 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 MEGF9Q9H1U4 602 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 IGHV3OR16-10A0A075B7F0 116 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 IGLC6P0CF74 106 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 COL5A1-AS1Q5SY13 56 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 LINC00173Q6ZV60 143 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 ORMDL3Q8N138 153 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 C10orf105Q8TEF2 133 aa12.74□□□□□ -0.37
CCDC90B-203ENST00000525503 IGHV4-61A0A0C4DH41 118 aa12.73□□□□□ -0.37
CCDC90B-203ENST00000525503 ORM1P02763 201 aa12.73□□□□□ -0.37
CCDC90B-203ENST00000525503 IGLL1P15814 213 aa12.73□□□□□ -0.37
CCDC90B-203ENST00000525503 PIFOQ8TCI5 191 aa12.73□□□□□ -0.37
CCDC90B-203ENST00000525503 PRELID3AQ96N28 172 aa12.73□□□□□ -0.37
CCDC90B-203ENST00000525503 ST20Q9HBF5 79 aa12.73□□□□□ -0.37
CCDC90B-203ENST00000525503 MRPS16Q9Y3D3 137 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-203ENST00000525503 U3KQE9 123 aa12.73□□□□□ -0.37
CCDC90B-203ENST00000525503 IGHV3-66A0A0C4DH42 116 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 D6R8Y8 96 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 ERCC8Q13216 396 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 TWIST1Q15672 202 aa12.72□□□□□ -0.37
CCDC90B-203ENST00000525503 CLEC2AQ6UVW9 174 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms