RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 ZNF253O75346 499 aa13.25□□□□□ -0.29
TSPAN4-215ENST00000525334 RRN3P1Q2M238 152 aa13.25□□□□□ -0.29
TSPAN4-215ENST00000525334 MIR17HGQ75NE6 70 aa13.25□□□□□ -0.29
TSPAN4-215ENST00000525334 MED28Q9H204 178 aa13.25□□□□□ -0.29
TSPAN4-215ENST00000525334 IGLL5B9A064 214 aa13.24□□□□□ -0.29
TSPAN4-215ENST00000525334 SPART-AS1P0CW21 52 aa13.24□□□□□ -0.29
TSPAN4-215ENST00000525334 HIST1H1EP10412 219 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-215ENST00000525334 OR10J6PQ8NGY7 276 aa13.24□□□□□ -0.29
TSPAN4-215ENST00000525334 FAM167A-AS1Q96KT0 104 aa13.24□□□□□ -0.29
TSPAN4-215ENST00000525334 NDUFB4O95168 129 aa13.23□□□□□ -0.29
TSPAN4-215ENST00000525334 IFNA5P01569 189 aa13.23□□□□□ -0.29
TSPAN4-215ENST00000525334 MRPL32Q9BYC8 188 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-215ENST00000525334 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
TSPAN4-215ENST00000525334 DKK2Q9UBU2 259 aa13.23□□□□□ -0.29
TSPAN4-215ENST00000525334 YTHDF2Q9Y5A9 579 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-215ENST00000525334 ZNF705GA8MUZ8 300 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 PRM2P04554 102 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 CDKN1BP46527 198 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 TCTAP57738 103 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 PDE6HQ13956 83 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 FFAR4Q5NUL3 377 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 FAM222AQ5U5X8 452 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 RPP25LQ8N5L8 163 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 SCGB1C1Q8TD33 95 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 BLNKQ8WV28 456 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 PARD6GQ9BYG4 376 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 FUT9Q9Y231 359 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 TIMM9Q9Y5J7 89 aa13.22□□□□□ -0.29
TSPAN4-215ENST00000525334 DEFB131BA0A096LNP1 70 aa13.21□□□□□ -0.29
TSPAN4-215ENST00000525334 TEX48A0A1B0GUV7 120 aa13.21□□□□□ -0.29
TSPAN4-215ENST00000525334 M0R3E3 92 aa13.21□□□□□ -0.29
TSPAN4-215ENST00000525334 MRPL53Q96EL3 112 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-215ENST00000525334 OR51M1Q9H341 326 aa13.21□□□□□ -0.29
TSPAN4-215ENST00000525334 APLNQ9ULZ1 77 aa13.21□□□□□ -0.29
TSPAN4-215ENST00000525334 VPS13DQ5THJ4 4388 aa13.21□□□□□ -0.3
TSPAN4-215ENST00000525334 NPIPB6E9PJ23 425 aa13.2□□□□□ -0.3
TSPAN4-215ENST00000525334 KIR3DS1Q14943 382 aa13.2□□□□□ -0.3
TSPAN4-215ENST00000525334 LGALS9CQ6DKI2 356 aa13.2□□□□□ -0.3
TSPAN4-215ENST00000525334 EXOC3-AS1Q8N2X6 119 aa13.2□□□□□ -0.3
TSPAN4-215ENST00000525334 LINC01587Q99440 93 aa13.2□□□□□ -0.3
TSPAN4-215ENST00000525334 PAXXQ9BUH6 204 aa13.2□□□□□ -0.3
TSPAN4-215ENST00000525334 IGHV4-4A0A075B6R2 117 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 OR10J4P0C629 311 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 CT45A10P0DMU9 189 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 RGS21Q2M5E4 152 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 TMEM256Q8N2U0 113 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 FXYD5Q96DB9 178 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 NIPSNAP3BQ9BS92 247 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 PRELID1Q9Y255 219 aa13.19□□□□□ -0.3
TSPAN4-215ENST00000525334 OR7C2O60412 319 aa13.18□□□□□ -0.3
TSPAN4-215ENST00000525334 GIPP09681 153 aaPredicted RBP13.18□□□□□ -0.3
TSPAN4-215ENST00000525334 AZU1P20160 251 aa13.18□□□□□ -0.3
TSPAN4-215ENST00000525334 TSPOP30536 169 aa13.18□□□□□ -0.3
TSPAN4-215ENST00000525334 TAS2R60P59551 318 aa13.18□□□□□ -0.3
TSPAN4-215ENST00000525334 Q5BKY6 102 aa13.18□□□□□ -0.3
TSPAN4-215ENST00000525334 GFI1BQ5VTD9 330 aa13.18□□□□□ -0.3
TSPAN4-215ENST00000525334 ODF3Q96PU9 254 aa13.18□□□□□ -0.3
TSPAN4-215ENST00000525334 AAMDCQ9H7C9 122 aa13.18□□□□□ -0.3
TSPAN4-215ENST00000525334 EPPK1P58107 5090 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-215ENST00000525334 ERCC8Q13216 396 aa13.17□□□□□ -0.3
TSPAN4-215ENST00000525334 ICAM4Q14773 271 aa13.17□□□□□ -0.3
TSPAN4-215ENST00000525334 RNF141Q8WVD5 230 aa13.17□□□□□ -0.3
TSPAN4-215ENST00000525334 ASB13Q8WXK3 278 aa13.17□□□□□ -0.3
TSPAN4-215ENST00000525334 ZNF503Q96F45 646 aa13.17□□□□□ -0.3
TSPAN4-215ENST00000525334 AQP10Q96PS8 301 aa13.17□□□□□ -0.3
TSPAN4-215ENST00000525334 KMT2AQ03164 3969 aa13.16□□□□□ -0.3
TSPAN4-215ENST00000525334 PLAC8L1A1L4L8 177 aa13.16□□□□□ -0.3
TSPAN4-215ENST00000525334 J3KRW8 73 aa13.16□□□□□ -0.3
TSPAN4-215ENST00000525334 HTN1P15515 57 aa13.16□□□□□ -0.3
TSPAN4-215ENST00000525334 LEPP41159 167 aa13.16□□□□□ -0.3
TSPAN4-215ENST00000525334 OXA1LQ15070 435 aa13.16□□□□□ -0.3
TSPAN4-215ENST00000525334 FAM122CQ6P4D5 195 aa13.16□□□□□ -0.3
TSPAN4-215ENST00000525334 PHYHIPLQ96FC7 376 aa13.16□□□□□ -0.3
TSPAN4-215ENST00000525334 C20orf144Q9BQM9 153 aa13.16□□□□□ -0.3
TSPAN4-215ENST00000525334 H7BYZ3 331 aa13.15□□□□□ -0.3
TSPAN4-215ENST00000525334 EIF3GO75821 320 aaKnown RBP eCLIP13.15□□□□□ -0.3
TSPAN4-215ENST00000525334 DAD1P61803 113 aa13.15□□□□□ -0.3
TSPAN4-215ENST00000525334 UBE2L3P68036 154 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-215ENST00000525334 KHDC3LQ587J8 217 aa13.15□□□□□ -0.3
TSPAN4-215ENST00000525334 IGKV2-40A0A087WW87 121 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-215ENST00000525334 LYRM9A8MSI8 78 aa13.14□□□□□ -0.31
TSPAN4-215ENST00000525334 IGKV2D-40P01614 121 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-215ENST00000525334 TAS2R45P59539 299 aa13.14□□□□□ -0.31
TSPAN4-215ENST00000525334 RAB2AP61019 212 aa13.14□□□□□ -0.31
TSPAN4-215ENST00000525334 ZNF266Q14584 549 aa13.14□□□□□ -0.31
TSPAN4-215ENST00000525334 ACOT6Q3I5F7 207 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-215ENST00000525334 C16orf74Q96GX8 76 aa13.14□□□□□ -0.31
TSPAN4-215ENST00000525334 AGPAT4-IT1Q9H0P7 198 aa13.14□□□□□ -0.31
TSPAN4-215ENST00000525334 HTN3P15516 51 aa13.13□□□□□ -0.31
TSPAN4-215ENST00000525334 M6PRP20645 277 aa13.13□□□□□ -0.31
TSPAN4-215ENST00000525334 HSD17B11Q8NBQ5 300 aa13.13□□□□□ -0.31
TSPAN4-215ENST00000525334 RNASE8Q8TDE3 154 aaKnown RBP13.13□□□□□ -0.31
TSPAN4-215ENST00000525334 FAM19A4Q96LR4 140 aa13.13□□□□□ -0.31
TSPAN4-215ENST00000525334 LINC00477Q96M19 166 aa13.13□□□□□ -0.31
TSPAN4-215ENST00000525334 NDUFAF3Q9BU61 184 aa13.13□□□□□ -0.31
TSPAN4-215ENST00000525334 TRAV12-3A0A0B4J271 114 aa13.12□□□□□ -0.31
TSPAN4-215ENST00000525334 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-215ENST00000525334 C9orf47Q6ZRZ4 202 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms