RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 RPL12P30050 165 aaKnown RBP9.18□□□□□ -0.94
TRAPPC4-205ENST00000525079 GUK1Q16774 197 aa9.18□□□□□ -0.94
TRAPPC4-205ENST00000525079 LGALS9CQ6DKI2 356 aa9.18□□□□□ -0.94
TRAPPC4-205ENST00000525079 MIR17HGQ75NE6 70 aa9.18□□□□□ -0.94
TRAPPC4-205ENST00000525079 RPP25LQ8N5L8 163 aaKnown RBP9.18□□□□□ -0.94
TRAPPC4-205ENST00000525079 DKK2Q9UBU2 259 aa9.18□□□□□ -0.94
TRAPPC4-205ENST00000525079 HSPB11Q9Y547 144 aa9.18□□□□□ -0.94
TRAPPC4-205ENST00000525079 TRBV19A0A075B6N1 114 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 IGHV4-4A0A075B6R2 117 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 PET100P0DJ07 73 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 HIST1H1EP10412 219 aaKnown RBP9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 AZU1P20160 251 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 KIR3DS1Q14943 382 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 OR10J6PQ8NGY7 276 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 BLNKQ8WV28 456 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 LINC01587Q99440 93 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 ATP5SQ99766 215 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 TMEM14CQ9P0S9 112 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 TIMM9Q9Y5J7 89 aa9.17□□□□□ -0.94
TRAPPC4-205ENST00000525079 J3KRW8 73 aa9.16□□□□□ -0.94
TRAPPC4-205ENST00000525079 M0R3E3 92 aa9.16□□□□□ -0.94
TRAPPC4-205ENST00000525079 NDUFB4O95168 129 aa9.16□□□□□ -0.94
TRAPPC4-205ENST00000525079 PTTG1O95997 202 aa9.16□□□□□ -0.94
TRAPPC4-205ENST00000525079 HTN1P15515 57 aa9.16□□□□□ -0.94
TRAPPC4-205ENST00000525079 HTN3P15516 51 aa9.16□□□□□ -0.94
TRAPPC4-205ENST00000525079 FCN2Q15485 313 aa9.16□□□□□ -0.94
TRAPPC4-205ENST00000525079 NIPSNAP3BQ9BS92 247 aa9.16□□□□□ -0.94
TRAPPC4-205ENST00000525079 WFDC1Q9HC57 220 aa9.16□□□□□ -0.94
TRAPPC4-205ENST00000525079 C17orf112F2Z3M2 114 aa9.15□□□□□ -0.94
TRAPPC4-205ENST00000525079 CT45A10P0DMU9 189 aa9.15□□□□□ -0.94
TRAPPC4-205ENST00000525079 CDKN1BP46527 198 aa9.15□□□□□ -0.94
TRAPPC4-205ENST00000525079 TCTAP57738 103 aa9.15□□□□□ -0.94
TRAPPC4-205ENST00000525079 ERCC8Q13216 396 aa9.15□□□□□ -0.94
TRAPPC4-205ENST00000525079 EXOC3-AS1Q8N2X6 119 aa9.15□□□□□ -0.94
TRAPPC4-205ENST00000525079 SCGB1C1Q8TD33 95 aa9.15□□□□□ -0.94
TRAPPC4-205ENST00000525079 FAM167A-AS1Q96KT0 104 aa9.15□□□□□ -0.94
TRAPPC4-205ENST00000525079 MED28Q9H204 178 aa9.15□□□□□ -0.94
TRAPPC4-205ENST00000525079 EIF3GO75821 320 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRAPPC4-205ENST00000525079 IFNA5P01569 189 aa9.14□□□□□ -0.95
TRAPPC4-205ENST00000525079 OR10J4P0C629 311 aa9.14□□□□□ -0.95
TRAPPC4-205ENST00000525079 DAD1P61803 113 aa9.14□□□□□ -0.95
TRAPPC4-205ENST00000525079 FFAR4Q5NUL3 377 aa9.14□□□□□ -0.95
TRAPPC4-205ENST00000525079 OR51M1Q9H341 326 aa9.14□□□□□ -0.95
TRAPPC4-205ENST00000525079 KCNIP2Q9NS61 270 aa9.14□□□□□ -0.95
TRAPPC4-205ENST00000525079 FUT9Q9Y231 359 aa9.14□□□□□ -0.95
TRAPPC4-205ENST00000525079 TEX48A0A1B0GUV7 120 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 NPIPB6E9PJ23 425 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 ZNF253O75346 499 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 NBEAP1P0C6P0 100 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 TSPOP30536 169 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 ICAM4Q14773 271 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 GFI1BQ5VTD9 330 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 FAM122CQ6P4D5 195 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 TMEM256Q8N2U0 113 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 PAXXQ9BUH6 204 aa9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 MRPL32Q9BYC8 188 aaKnown RBP9.13□□□□□ -0.95
TRAPPC4-205ENST00000525079 PLAC8L1A1L4L8 177 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 DEFB130BP0DP73 79 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 DEFB130AP0DP74 79 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 TAS2R60P59551 318 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 Q5BKY6 102 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 RNF141Q8WVD5 230 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 FXYD5Q96DB9 178 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 MRPL53Q96EL3 112 aaKnown RBP9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 NDUFAF3Q9BU61 184 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 PRELID1Q9Y255 219 aa9.12□□□□□ -0.95
TRAPPC4-205ENST00000525079 IGKV2-40A0A087WW87 121 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 TRAV12-3A0A0B4J271 114 aa9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 OR7C2O60412 319 aa9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 IGKV2D-40P01614 121 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 LEPP41159 167 aa9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 PDE6HQ13956 83 aa9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 OXA1LQ15070 435 aa9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 ZNF503Q96F45 646 aa9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 PHYHIPLQ96FC7 376 aa9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 AGPAT4-IT1Q9H0P7 198 aa9.11□□□□□ -0.95
TRAPPC4-205ENST00000525079 LYRM9A8MSI8 78 aa9.1□□□□□ -0.95
TRAPPC4-205ENST00000525079 H7BYZ3 331 aa9.1□□□□□ -0.95
TRAPPC4-205ENST00000525079 RANP62826 216 aaKnown RBP9.1□□□□□ -0.95
TRAPPC4-205ENST00000525079 C16orf74Q96GX8 76 aa9.1□□□□□ -0.95
TRAPPC4-205ENST00000525079 RAB2AP61019 212 aa9.09□□□□□ -0.95
TRAPPC4-205ENST00000525079 UBE2L3P68036 154 aaKnown RBP9.09□□□□□ -0.95
TRAPPC4-205ENST00000525079 LINC00477Q96M19 166 aa9.09□□□□□ -0.95
TRAPPC4-205ENST00000525079 ODF3Q96PU9 254 aa9.09□□□□□ -0.95
TRAPPC4-205ENST00000525079 VGLL1Q99990 258 aa9.09□□□□□ -0.95
TRAPPC4-205ENST00000525079 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
TRAPPC4-205ENST00000525079 NOP10Q9NPE3 64 aaKnown RBP9.09□□□□□ -0.95
TRAPPC4-205ENST00000525079 HMGB3O15347 200 aaKnown RBP9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 RNASE4P34096 147 aaKnown RBP9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 CD300CQ08708 224 aa9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 BTN1A1Q13410 526 aa9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 ACOT6Q3I5F7 207 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 KHDC3LQ587J8 217 aa9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 TMEM88Q6PEY1 159 aa9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 CCDC28AQ8IWP9 274 aa9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 HSD17B11Q8NBQ5 300 aa9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 RNASE8Q8TDE3 154 aaKnown RBP9.08□□□□□ -0.96
TRAPPC4-205ENST00000525079 TMEM263Q8WUH6 116 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms