RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 J3KRW8 73 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 CDK2AP2O75956 126 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 RLN2P04090 185 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 M6PRP20645 277 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 LEPP41159 167 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 CAMLGP49069 296 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 ZNF846Q147U1 533 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 CNPY1Q3B7I2 92 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 TTC32Q5I0X7 151 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 C20orf85Q9H1P6 137 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 LSM5Q9Y4Y9 91 aaKnown RBP11.32□□□□□ -0.6
HIF3A-208ENST00000524533 HSPG2P98160 4391 aa11.32□□□□□ -0.6
HIF3A-208ENST00000524533 A0A0J9YY99 117 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 GAGE12BA1L429 117 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 H3BQ15 152 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 GAGE7O76087 117 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 IL7P13232 177 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 BCAP31P51572 246 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 RAB31Q13636 194 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 GUK1Q16774 197 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 Q6ZRG5 221 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 RXFP4Q8TDU9 374 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 SAT2Q96F10 170 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-208ENST00000524533 ZNF503Q96F45 646 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 ODF3Q96PU9 254 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 Q9H8V8 135 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 DNAJC4Q9NNZ3 241 aa11.31□□□□□ -0.6
HIF3A-208ENST00000524533 TRAV12-3A0A0B4J271 114 aa11.3□□□□□ -0.6
HIF3A-208ENST00000524533 FAM25EA8MYX2 175 aa11.3□□□□□ -0.6
HIF3A-208ENST00000524533 NPIPB6E9PJ23 425 aa11.3□□□□□ -0.6
HIF3A-208ENST00000524533 HOXA5P20719 270 aa11.3□□□□□ -0.6
HIF3A-208ENST00000524533 CAV2P51636 162 aa11.3□□□□□ -0.6
HIF3A-208ENST00000524533 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
HIF3A-208ENST00000524533 OR1L4Q8NGR5 311 aa11.3□□□□□ -0.6
HIF3A-208ENST00000524533 PFDN5Q99471 154 aa11.3□□□□□ -0.6
HIF3A-208ENST00000524533 TRAV5A0A0B4J249 113 aa11.29□□□□□ -0.6
HIF3A-208ENST00000524533 CST7O76096 145 aa11.29□□□□□ -0.6
HIF3A-208ENST00000524533 CT45A10P0DMU9 189 aa11.29□□□□□ -0.6
HIF3A-208ENST00000524533 MAPKAPK5-AS1Q8N8E1 139 aa11.29□□□□□ -0.6
HIF3A-208ENST00000524533 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
HIF3A-208ENST00000524533 KRTAP1-5Q9BYS1 174 aa11.29□□□□□ -0.6
HIF3A-208ENST00000524533 Q9H3A6 140 aa11.29□□□□□ -0.6
HIF3A-208ENST00000524533 UQCC1Q9NVA1 299 aa11.29□□□□□ -0.6
HIF3A-208ENST00000524533 WDR83OSQ9Y284 106 aa11.29□□□□□ -0.6
HIF3A-208ENST00000524533 UPK3BQ9BT76 320 aa11.28□□□□□ -0.6
HIF3A-208ENST00000524533 TMPRSS5Q9H3S3 457 aa11.28□□□□□ -0.6
HIF3A-208ENST00000524533 UBE2L5PA0A1B0GUS4 154 aa11.27□□□□□ -0.61
HIF3A-208ENST00000524533 C5orf51A6NDU8 294 aa11.27□□□□□ -0.61
HIF3A-208ENST00000524533 FAM24AA6NFZ4 105 aa11.27□□□□□ -0.61
HIF3A-208ENST00000524533 H3BNG1 76 aa11.27□□□□□ -0.61
HIF3A-208ENST00000524533 ZNF253O75346 499 aa11.27□□□□□ -0.61
HIF3A-208ENST00000524533 PVALBP20472 110 aaPredicted RBP11.27□□□□□ -0.61
HIF3A-208ENST00000524533 BAXQ07812 192 aa11.27□□□□□ -0.61
HIF3A-208ENST00000524533 Q6ZTI0 123 aa11.27□□□□□ -0.61
HIF3A-208ENST00000524533 SPATA12Q7Z6I5 190 aa11.27□□□□□ -0.61
HIF3A-208ENST00000524533 ZNF431Q8TF32 576 aaPredicted RBP11.27□□□□□ -0.61
HIF3A-208ENST00000524533 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
HIF3A-208ENST00000524533 MRPS16Q9Y3D3 137 aaKnown RBP11.27□□□□□ -0.61
HIF3A-208ENST00000524533 TRAV6A0A075B6T7 132 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 LYRM1O43325 122 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 S100A10P60903 97 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
HIF3A-208ENST00000524533 ESRGQ1W209 222 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 VWC2Q2TAL6 325 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 C12orf45Q8N5I9 185 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-208ENST00000524533 ZNF680Q8NEM1 530 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
HIF3A-208ENST00000524533 SEC22CQ9BRL7 303 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 C11orf1Q9H5F2 150 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 LRP1BQ9NZR2 4599 aa11.26□□□□□ -0.61
HIF3A-208ENST00000524533 TRBV19A0A075B6N1 114 aa11.25□□□□□ -0.61
HIF3A-208ENST00000524533 A0A1W2PPQ1 181 aa11.25□□□□□ -0.61
HIF3A-208ENST00000524533 C7orf71A4D174 169 aa11.25□□□□□ -0.61
HIF3A-208ENST00000524533 M0R3E3 92 aa11.25□□□□□ -0.61
HIF3A-208ENST00000524533 PLA2G10O15496 165 aa11.25□□□□□ -0.61
HIF3A-208ENST00000524533 TCRBP04435 133 aa11.25□□□□□ -0.61
HIF3A-208ENST00000524533 SLC25A5P05141 298 aaKnown RBP11.25□□□□□ -0.61
HIF3A-208ENST00000524533 RPL29P47914 159 aaKnown RBP11.25□□□□□ -0.61
HIF3A-208ENST00000524533 SULT1A1P50225 295 aa11.25□□□□□ -0.61
HIF3A-208ENST00000524533 LYRM2Q9NU23 88 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-208ENST00000524533 TRGV2A0A075B6R0 118 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 S100A11P31949 105 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 HBG1P69891 147 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 HBG2P69892 147 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 ERCC8Q13216 396 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 STX12Q86Y82 276 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 C2orf50Q96LR7 162 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 GSN-AS1Q9NRJ2 163 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 NUDT15Q9NV35 164 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
HIF3A-208ENST00000524533 IGSF23A1L1A6 192 aa11.23□□□□□ -0.61
HIF3A-208ENST00000524533 FGF7P21781 194 aa11.23□□□□□ -0.61
HIF3A-208ENST00000524533 BTN1A1Q13410 526 aa11.23□□□□□ -0.61
HIF3A-208ENST00000524533 C11orf72Q8NBR9 251 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms