RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 TBPP20226 339 aa11.43□□□□□ -0.58
PVT1-220ENST00000524165 GABARAPL2P60520 117 aa11.43□□□□□ -0.58
PVT1-220ENST00000524165 SMCO1Q147U7 214 aa11.43□□□□□ -0.58
PVT1-220ENST00000524165 SH2D6Q7Z4S9 175 aa11.43□□□□□ -0.58
PVT1-220ENST00000524165 C7orf71A4D174 169 aa11.42□□□□□ -0.58
PVT1-220ENST00000524165 RBFOX3A6NFN3 312 aa11.42□□□□□ -0.58
PVT1-220ENST00000524165 PMS2P5A8MQ11 134 aa11.42□□□□□ -0.58
PVT1-220ENST00000524165 MRPS12O15235 138 aaKnown RBP11.42□□□□□ -0.58
PVT1-220ENST00000524165 HYPMO75409 117 aa11.42□□□□□ -0.58
PVT1-220ENST00000524165 S100A7AQ86SG5 101 aa11.42□□□□□ -0.58
PVT1-220ENST00000524165 RTBDNQ9BSG5 229 aaPredicted RBP11.42□□□□□ -0.58
PVT1-220ENST00000524165 C14orf166Q9Y224 244 aaKnown RBP11.42□□□□□ -0.58
PVT1-220ENST00000524165 RNF24Q9Y225 148 aa11.42□□□□□ -0.58
PVT1-220ENST00000524165 C9JCJ5 164 aa11.41□□□□□ -0.58
PVT1-220ENST00000524165 PRSS46E5RG02 174 aa11.41□□□□□ -0.58
PVT1-220ENST00000524165 PLP1P60201 277 aa11.41□□□□□ -0.58
PVT1-220ENST00000524165 SLC25A31Q9H0C2 315 aa11.41□□□□□ -0.58
PVT1-220ENST00000524165 AKR1C4P17516 323 aa11.4□□□□□ -0.58
PVT1-220ENST00000524165 ZNF846Q147U1 533 aa11.4□□□□□ -0.58
PVT1-220ENST00000524165 SCGB2B2Q4G0G5 96 aa11.4□□□□□ -0.58
PVT1-220ENST00000524165 C4orf46Q504U0 113 aa11.4□□□□□ -0.58
PVT1-220ENST00000524165 PAXXQ9BUH6 204 aa11.4□□□□□ -0.58
PVT1-220ENST00000524165 TRAV8-6A0A0B4J262 113 aa11.39□□□□□ -0.59
PVT1-220ENST00000524165 OR5G3P0C626 314 aa11.39□□□□□ -0.59
PVT1-220ENST00000524165 ANXA7P20073 488 aaKnown RBP11.39□□□□□ -0.59
PVT1-220ENST00000524165 PPT1P50897 306 aa11.39□□□□□ -0.59
PVT1-220ENST00000524165 OR4D10Q8NGI6 311 aa11.39□□□□□ -0.59
PVT1-220ENST00000524165 PAIP2BQ9ULR5 123 aaKnown RBP11.39□□□□□ -0.59
PVT1-220ENST00000524165 KLLNB2CW77 178 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 APOA1P02647 267 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 IL5P05113 134 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 SFTA3P0C7M3 94 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 AKR1C1Q04828 323 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 CYP2G1PQ6ZSU1 146 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 OR10G4Q8NGN3 311 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 ZNF479Q96JC4 524 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 CNBD2Q96M20 576 aa11.38□□□□□ -0.59
PVT1-220ENST00000524165 A0A0B4J2A0 478 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 MPDU1O75352 247 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 CCNKO75909 580 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 IGHV3-30P01768 117 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 IGHV3-33P01772 117 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 IGHV3-30-3P0DP02 117 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 IGHV3-30-5P0DP03 117 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 SURF2Q15527 256 aaPredicted RBP11.37□□□□□ -0.59
PVT1-220ENST00000524165 Q8N976 141 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 SHPKQ9UHJ6 478 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 PXMP4Q9Y6I8 212 aa11.37□□□□□ -0.59
PVT1-220ENST00000524165 TRAV8-3A0A0A6YYJ7 113 aa11.36□□□□□ -0.59
PVT1-220ENST00000524165 LINC00869P0C866 280 aa11.36□□□□□ -0.59
PVT1-220ENST00000524165 RPS19P39019 145 aaKnown RBP11.36□□□□□ -0.59
PVT1-220ENST00000524165 BAALCQ8WXS3 180 aa11.36□□□□□ -0.59
PVT1-220ENST00000524165 TP53TG3Q9ULZ0 132 aa11.36□□□□□ -0.59
PVT1-220ENST00000524165 SLC17A3O00476 420 aa11.35□□□□□ -0.59
PVT1-220ENST00000524165 IAPPP10997 89 aa11.35□□□□□ -0.59
PVT1-220ENST00000524165 SELENOTP62341 195 aa11.35□□□□□ -0.59
PVT1-220ENST00000524165 RPP30P78346 268 aaKnown RBP11.35□□□□□ -0.59
PVT1-220ENST00000524165 CD300CQ08708 224 aa11.35□□□□□ -0.59
PVT1-220ENST00000524165 BTN1A1Q13410 526 aa11.35□□□□□ -0.59
PVT1-220ENST00000524165 OR10J3Q5JRS4 329 aa11.35□□□□□ -0.59
PVT1-220ENST00000524165 NRG4Q8WWG1 115 aa11.35□□□□□ -0.59
PVT1-220ENST00000524165 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 RGS13O14921 159 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 SNRPCP09234 159 aaKnown RBP11.34□□□□□ -0.59
PVT1-220ENST00000524165 LYZL2Q7Z4W2 148 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 NHLRC2Q8NBF2 726 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 FAM19A4Q96LR4 140 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 ARPC5LQ9BPX5 153 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 PRR13Q9NZ81 148 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 MTFP1Q9UDX5 166 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 KCNIP3Q9Y2W7 256 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
PVT1-220ENST00000524165 LOC100131303A0A0U1RQF7 123 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 RAB3DO95716 219 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 RNASE4P34096 147 aaKnown RBP11.33□□□□□ -0.6
PVT1-220ENST00000524165 TGFBR1P36897 503 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 PATE2Q6UY27 113 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 BPIFA4PQ86YQ2 179 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 TMEM229BQ8NBD8 167 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 OR10P1Q8NGE3 313 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 SAT2Q96F10 170 aaPredicted RBP11.33□□□□□ -0.6
PVT1-220ENST00000524165 CIB3Q96Q77 187 aaPredicted RBP11.33□□□□□ -0.6
PVT1-220ENST00000524165 ARV1Q9H2C2 271 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 COMMD3Q9UBI1 195 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 GPR132Q9UNW8 380 aa11.33□□□□□ -0.6
PVT1-220ENST00000524165 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
PVT1-220ENST00000524165 PITX3O75364 302 aa11.32□□□□□ -0.6
PVT1-220ENST00000524165 TAS2R19P59542 299 aa11.32□□□□□ -0.6
PVT1-220ENST00000524165 OR52I2Q8NH67 350 aa11.32□□□□□ -0.6
PVT1-220ENST00000524165 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
PVT1-220ENST00000524165 RASL10AQ92737 203 aa11.32□□□□□ -0.6
PVT1-220ENST00000524165 ARL6Q9H0F7 186 aa11.32□□□□□ -0.6
PVT1-220ENST00000524165 MED6O75586 246 aa11.31□□□□□ -0.6
PVT1-220ENST00000524165 OR4E1P0C645 316 aa11.31□□□□□ -0.6
PVT1-220ENST00000524165 OPCMLQ14982 345 aa11.31□□□□□ -0.6
PVT1-220ENST00000524165 LELP1Q5T871 98 aa11.31□□□□□ -0.6
PVT1-220ENST00000524165 H3BTX0 84 aa11.3□□□□□ -0.6
PVT1-220ENST00000524165 GPX1P07203 203 aa11.3□□□□□ -0.6
PVT1-220ENST00000524165 PFN1P07737 140 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms