RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 OR10J6PQ8NGY7 276 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 C20orf144Q9BQM9 153 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 KRTAP4-5Q9BYR2 181 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 DNAJC4Q9NNZ3 241 aa13.09□□□□□ -0.31
PTP4A3-206ENST00000524028 FAM24AA6NFZ4 105 aa13.08□□□□□ -0.32
PTP4A3-206ENST00000524028 FAM25EA8MYX2 175 aa13.08□□□□□ -0.32
PTP4A3-206ENST00000524028 J3KRW8 73 aa13.08□□□□□ -0.32
PTP4A3-206ENST00000524028 CT45A10P0DMU9 189 aa13.08□□□□□ -0.32
PTP4A3-206ENST00000524028 BCAP31P51572 246 aa13.08□□□□□ -0.32
PTP4A3-206ENST00000524028 SEC22CQ9BRL7 303 aa13.08□□□□□ -0.32
PTP4A3-206ENST00000524028 PXMP4Q9Y6I8 212 aa13.08□□□□□ -0.32
PTP4A3-206ENST00000524028 TRAV6A0A075B6T7 132 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 LYRM1O43325 122 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 TCRBP04435 133 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 HOXA5P20719 270 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 CAV2P51636 162 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 OR5I1Q13606 314 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 ZNF846Q147U1 533 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 SSX7Q7RTT5 188 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 ZNF586Q9NXT0 402 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 WDR83OSQ9Y284 106 aa13.07□□□□□ -0.32
PTP4A3-206ENST00000524028 TRAV26-1A0A087WT03 109 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 GAGE12BA1L429 117 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 NPIPB6E9PJ23 425 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 GAGE7O76087 117 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 GAGE12FP0CL80 117 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 GAGE12GP0CL81 117 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 GAGE12IP0CL82 117 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 CLINT1Q14677 625 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 VWC2Q2TAL6 325 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 Q6ZRG5 221 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 CCDC28AQ8IWP9 274 aa13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 ZNF431Q8TF32 576 aaPredicted RBP13.06□□□□□ -0.32
PTP4A3-206ENST00000524028 MUC4Q99102 2169 aa13.05□□□□□ -0.32
PTP4A3-206ENST00000524028 TRAV12-3A0A0B4J271 114 aa13.05□□□□□ -0.32
PTP4A3-206ENST00000524028 A0A0J9YY99 117 aa13.05□□□□□ -0.32
PTP4A3-206ENST00000524028 C5orf51A6NDU8 294 aa13.05□□□□□ -0.32
PTP4A3-206ENST00000524028 RAB31Q13636 194 aa13.05□□□□□ -0.32
PTP4A3-206ENST00000524028 GUK1Q16774 197 aa13.05□□□□□ -0.32
PTP4A3-206ENST00000524028 GNPNAT1Q96EK6 184 aaPredicted RBP13.05□□□□□ -0.32
PTP4A3-206ENST00000524028 UQCC1Q9NVA1 299 aa13.05□□□□□ -0.32
PTP4A3-206ENST00000524028 IGSF23A1L1A6 192 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 M6PRP20645 277 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 IL15RAQ13261 267 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 OR1L4Q8NGR5 311 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 RXFP4Q8TDU9 374 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 C2orf50Q96LR7 162 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 ODF3Q96PU9 254 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 Q9H8V8 135 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 SLC39A9Q9NUM3 307 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 NUDT15Q9NV35 164 aa13.04□□□□□ -0.32
PTP4A3-206ENST00000524028 C16orf90A8MZG2 172 aa13.03□□□□□ -0.32
PTP4A3-206ENST00000524028 RLN2P04090 185 aa13.03□□□□□ -0.32
PTP4A3-206ENST00000524028 LEPP41159 167 aa13.03□□□□□ -0.32
PTP4A3-206ENST00000524028 RPL29P47914 159 aaKnown RBP13.03□□□□□ -0.32
PTP4A3-206ENST00000524028 C12orf45Q8N5I9 185 aaPredicted RBP13.03□□□□□ -0.32
PTP4A3-206ENST00000524028 PFDN5Q99471 154 aa13.03□□□□□ -0.32
PTP4A3-206ENST00000524028 KRTAP1-5Q9BYS1 174 aa13.03□□□□□ -0.32
PTP4A3-206ENST00000524028 LYRM2Q9NU23 88 aaPredicted RBP13.03□□□□□ -0.32
PTP4A3-206ENST00000524028 HSPG2P98160 4391 aa13.03□□□□□ -0.32
PTP4A3-206ENST00000524028 TRBV19A0A075B6N1 114 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 UBE2L5PA0A1B0GUS4 154 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 M0R3E3 92 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 ZNF253O75346 499 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 NDUFB4O95168 129 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 SULT1A1P50225 295 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 ERCC8Q13216 396 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 ESRGQ1W209 222 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 TMEM252Q8N6L7 170 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 ZNF503Q96F45 646 aa13.02□□□□□ -0.33
PTP4A3-206ENST00000524028 LRP1BQ9NZR2 4599 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 SNURFLB1AK76 121 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 S100A11P31949 105 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 S100A10P60903 97 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 BAXQ07812 192 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 RAB32Q13637 225 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 Q6ZTI0 123 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 CHAC2Q8WUX2 184 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 PYGO2Q9BRQ0 406 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 TMPRSS5Q9H3S3 457 aa13.01□□□□□ -0.33
PTP4A3-206ENST00000524028 PVALBP20472 110 aaPredicted RBP13□□□□□ -0.33
PTP4A3-206ENST00000524028 DAZ2Q13117 558 aaKnown RBP13□□□□□ -0.33
PTP4A3-206ENST00000524028 MRPL53Q96EL3 112 aaKnown RBP13□□□□□ -0.33
PTP4A3-206ENST00000524028 FAM19A4Q96LR4 140 aa13□□□□□ -0.33
PTP4A3-206ENST00000524028 TMEM14CQ9P0S9 112 aa13□□□□□ -0.33
PTP4A3-206ENST00000524028 ZNF324O75467 553 aaPredicted RBP12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 H2AFB2P0C5Z0 115 aa12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 PYYP10082 97 aa12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 FGF7P21781 194 aa12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 CD300CQ08708 224 aa12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 C11orf72Q8NBR9 251 aa12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 UPK3BQ9BT76 320 aa12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 AGPAT4-IT1Q9H0P7 198 aa12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 GSN-AS1Q9NRJ2 163 aa12.99□□□□□ -0.33
PTP4A3-206ENST00000524028 C7orf71A4D174 169 aa12.98□□□□□ -0.33
PTP4A3-206ENST00000524028 KLLNB2CW77 178 aa12.98□□□□□ -0.33
PTP4A3-206ENST00000524028 H3BNG1 76 aa12.98□□□□□ -0.33
PTP4A3-206ENST00000524028 CDK2AP2O75956 126 aa12.98□□□□□ -0.33
PTP4A3-206ENST00000524028 SLC25A5P05141 298 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms