RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 TIMM8BQ9Y5J9 83 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-228ENST00000524023 TMEM213A2RRL7 107 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 H0Y8G0 127 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 TMEM11P17152 192 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 ZFP36P26651 326 aaKnown RBP8.63□□□□□ -1.03
HDAC9-228ENST00000524023 RELQ04864 619 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-228ENST00000524023 SAPCD1Q5SSQ6 148 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 MINOS1Q5TGZ0 78 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 Q6ZVH6 145 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 PRR25Q96S07 402 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 ZNF747Q9BV97 191 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 RABAC1Q9UI14 185 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 SMAD5-AS1Q9Y6J3 95 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 COX11Q9Y6N1 276 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 MINOS1-NBL1R4GNA1 71 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 ATRXP46100 2492 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 IGHV7-81A0A0B4J1V7 117 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 D6R8Y8 96 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 TCF21O43680 179 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 IFI27P40305 119 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-228ENST00000524023 KLRB1Q12918 225 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 FAM104BQ5XKR9 115 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 OR10AG1Q8NH19 301 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 SCRT2Q9NQ03 307 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 U3KQK5 164 aa8.63□□□□□ -1.03
HDAC9-228ENST00000524023 SCGB2A1O75556 95 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 IGHG4P01861 327 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 MS4A6AQ9H2W1 248 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 MSRB2Q9Y3D2 182 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 FBLL1A6NHQ2 334 aaKnown RBP8.62□□□□□ -1.03
HDAC9-228ENST00000524023 FAM106CPP0CH98 169 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 FAM106AQ4KMX7 169 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 IGFL4Q6B9Z1 124 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 DTX2Q86UW9 622 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 AMN1Q8IY45 258 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 Q8N9W7 124 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 ZNF738Q8NE65 137 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 VGLL1Q99990 258 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 SIGLEC8Q9NYZ4 499 aa8.62□□□□□ -1.03
HDAC9-228ENST00000524023 MED13LQ71F56 2210 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 A0A096LNJ9 63 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 HLA-DMBP28068 263 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 ZNF80P51504 273 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-228ENST00000524023 LOXL1Q08397 574 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-228ENST00000524023 Q8TAT8 98 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 PRELID3AQ96N28 172 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 SIRPDQ9H106 197 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 IGHV3OR16-8A0A075B7F1 116 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 MUC21A0A0G2JKD1 596 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 MUC21A0A140T8X8 626 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 CCL25O15444 150 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 NCR2O95944 276 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 MRPL51Q4U2R6 128 aaKnown RBP8.61□□□□□ -1.03
HDAC9-228ENST00000524023 MUC21Q5SSG8 566 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 ORMDL3Q8N138 153 aa8.61□□□□□ -1.03
HDAC9-228ENST00000524023 SPTBN1Q01082 2364 aaKnown RBP8.6□□□□□ -1.03
HDAC9-228ENST00000524023 IGHV3-35A0A0C4DH35 117 aa8.6□□□□□ -1.03
HDAC9-228ENST00000524023 NUDT3O95989 172 aa8.6□□□□□ -1.03
HDAC9-228ENST00000524023 BMI1P35226 326 aa8.6□□□□□ -1.03
HDAC9-228ENST00000524023 PTTG1IPP53801 180 aa8.6□□□□□ -1.03
HDAC9-228ENST00000524023 UCNP55089 124 aa8.6□□□□□ -1.03
HDAC9-228ENST00000524023 RPS20P60866 119 aaKnown RBP8.6□□□□□ -1.03
HDAC9-228ENST00000524023 ZNF575Q86XF7 245 aa8.6□□□□□ -1.03
HDAC9-228ENST00000524023 RAXQ9Y2V3 346 aa8.6□□□□□ -1.03
HDAC9-228ENST00000524023 A0A1W2PPR1 153 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 IGLC6P0CF74 106 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 S100A7P31151 101 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 UBE2V1Q13404 147 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 FER1L6-AS1Q8NA97 138 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 FAM110DQ8TAY7 271 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-228ENST00000524023 ZNF502Q8TBZ5 544 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 NDUFS7O75251 213 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 GPR183P32249 361 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
HDAC9-228ENST00000524023 C15orf32Q32M92 178 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 BVES-AS1Q5T3Y7 98 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 AJUBAQ96IF1 538 aa8.59□□□□□ -1.03
HDAC9-228ENST00000524023 UBE2E1P51965 193 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 PAX8Q06710 450 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 TWIST1Q15672 202 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 ECSCRQ19T08 205 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 KLK9Q2XQG4 91 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 OR8A1Q8NGG7 326 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 ZFAND3Q9H8U3 227 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 PPP1R14DQ9NXH3 145 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 KLK9Q9UKQ9 250 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 COL6A6A6NMZ7 2263 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 CACNA1BQ00975 2339 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 A0A087X0K7 114 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 IGHV2-70DA0A0C4DH43 119 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 CLEC3BP05452 202 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 COX8AP10176 69 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 CKS2P33552 79 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 C12orf54Q6X4T0 127 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 PIP4P2Q8N4L2 257 aa8.58□□□□□ -1.04
HDAC9-228ENST00000524023 PSMG3-AS1Q96PY0 264 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms