RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 IGLV3-9A0A075B6K5 115 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 TRBV24-1A0A075B6N3 115 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 IGHV1-18A0A0C4DH31 117 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 OR5H14A6NHG9 310 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 CDIPTO14735 213 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 DEGS1O15121 323 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 CDS2O95674 445 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 CD3DP04234 171 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 ERP29P30040 261 aaKnown RBP1.88□□□□□ -2.11
SKP1-212ENST00000523966 TSPOP30536 169 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 SRP9P49458 86 aaKnown RBP1.88□□□□□ -2.11
SKP1-212ENST00000523966 ARPC4P59998 168 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 RRAS2P62070 204 aaPredicted RBP1.88□□□□□ -2.11
SKP1-212ENST00000523966 SMIM21Q3B7S5 101 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 TMEM128Q5BJH2 165 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 LPCAT3Q6P1A2 487 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 HAGHLQ6PII5 290 aaPredicted RBP1.88□□□□□ -2.11
SKP1-212ENST00000523966 IDO2Q6ZQW0 420 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 Q6ZS49 121 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 TRAPPC6BQ86SZ2 158 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 TCTE3Q8IZS6 198 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 OR5D18Q8NGL1 313 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 OR4C16Q8NGL9 310 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 OR11L1Q8NGX0 322 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 OR10K1Q8NGX5 313 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 OR4K15Q8NH41 348 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 SLC25A40Q8TBP6 338 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 NEK7Q8TDX7 302 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 RNASE6Q93091 150 aaKnown RBP1.88□□□□□ -2.11
SKP1-212ENST00000523966 MRAP2Q96G30 205 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 ARHGAP5-AS1Q96IT6 56 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 DHRS9Q9BPW9 319 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 CMSS1Q9BQ75 279 aaKnown RBP1.88□□□□□ -2.11
SKP1-212ENST00000523966 GINS4Q9BRT9 223 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 ADAT1Q9BUB4 502 aaKnown RBP1.88□□□□□ -2.11
SKP1-212ENST00000523966 C1QTNF6Q9BXI9 259 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 PECRQ9BY49 303 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 TLNRD1Q9H1K6 362 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 OR51B6Q9H340 312 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 ZNF286AQ9HBT8 521 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 COMMD9Q9P000 198 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 ANAPC10Q9UM13 185 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 WDFY3Q8IZQ1 3526 aa1.88□□□□□ -2.11
SKP1-212ENST00000523966 CHD3Q12873 2000 aaKnown RBP1.88□□□□□ -2.11
SKP1-212ENST00000523966 BOD1L1Q8NFC6 3051 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 ZFYVE26Q68DK2 2539 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 MYO18BQ8IUG5 2567 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 DSPP15924 2871 aaKnown RBP1.87□□□□□ -2.11
SKP1-212ENST00000523966 IGKV1-12A0A0C4DH73 117 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 TMEM30CPA0ZSE6 113 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 ATP6V1G2-DDX39BF2Z307 99 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 M0R233 179 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 GEMIN2O14893 280 aaKnown RBP1.87□□□□□ -2.11
SKP1-212ENST00000523966 NDUFA2O43678 99 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 SSNA1O43805 119 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 NAPSAO96009 420 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 IGKV1D-12P01611 117 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 C1QBP02746 253 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 CSN2P05814 226 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 S100A6P06703 90 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 GZMHP20718 246 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 CD200P41217 278 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 EIF2B2P49770 351 aaKnown RBP1.87□□□□□ -2.11
SKP1-212ENST00000523966 TNFAIP6P98066 277 aaPredicted RBP1.87□□□□□ -2.11
SKP1-212ENST00000523966 BSPH1Q075Z2 132 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 DHRS2Q13268 280 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 PIGYQ3MUY2 71 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 SCGB2B2Q4G0G5 96 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 C6orf201Q7Z4U5 140 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 TMED4Q7Z7H5 227 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 NIT1Q86X76 327 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 ZNF565Q8N9K5 539 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 OR4S1Q8NGB4 309 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 MUC7Q8TAX7 377 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 ZNF431Q8TF32 576 aaPredicted RBP1.87□□□□□ -2.11
SKP1-212ENST00000523966 HIST1H2BAQ96A08 127 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 HYLS1Q96M11 299 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 PHB2Q99623 299 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 HES4Q9HCC6 221 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 TREM1Q9NP99 234 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 TAAR3PQ9P1P4 343 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 AK3Q9UIJ7 227 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 ALG5Q9Y673 324 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 U3KQK5 164 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 CFAP47Q6ZTR5 3102 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 ABCA1O95477 2261 aa1.87□□□□□ -2.11
SKP1-212ENST00000523966 DOPEY1Q5JWR5 2465 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 MEIKINA0A087WXM9 373 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 TRAV38-1A0A0B4J264 116 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 C9orf170A2RU37 121 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 MEIS3P1A6NDR6 274 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 DPRXA6NFQ7 191 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 RFPL4AA6NLU0 287 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 RFPL4AL1F8VTS6 287 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 SYNGR1O43759 233 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 SH2D1AO60880 128 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 ATG12O94817 140 aa1.86□□□□□ -2.11
SKP1-212ENST00000523966 SFT2D2O95562 160 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms