RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 RAB1BQ9H0U4 201 aa7.19□□□□□ -1.26
CSMD1-212ENST00000523387 SIGLEC9Q9Y336 463 aa7.19□□□□□ -1.26
CSMD1-212ENST00000523387 CHTOPQ9Y3Y2 248 aaKnown RBP7.19□□□□□ -1.26
CSMD1-212ENST00000523387 TRAV40A0A0B4J280 105 aa7.19□□□□□ -1.26
CSMD1-212ENST00000523387 APOBEC3AP31941 199 aaPredicted RBP7.19□□□□□ -1.26
CSMD1-212ENST00000523387 DPF1Q92782 380 aa7.19□□□□□ -1.26
CSMD1-212ENST00000523387 TMEM8BA6NDV4 472 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 C16orf97H3BN30 126 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 RAB9AP51151 201 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 WFDC2Q14508 124 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 IGFL4Q6B9Z1 124 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 SHANK2-AS3Q9BTD1 123 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 TRANK1O15050 2925 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 IGHV3OR16-13A0A075B7E8 117 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 IGHV3-74A0A0B4J1X5 117 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 FABP5P3A8MUU1 101 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 MGPP08493 103 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 DLX1P56177 255 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 WFDC12Q8WWY7 111 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 CYSLTR1Q9Y271 337 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.18□□□□□ -1.26
CSMD1-212ENST00000523387 RPL11P62913 178 aaKnown RBP7.18□□□□□ -1.26
CSMD1-212ENST00000523387 SMPXQ9UHP9 88 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 ZGRF1Q86YA3 2104 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 ACACAQ13085 2346 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 F8W1H4 67 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 LYPD2Q6UXB3 125 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 LYPD1Q8N2G4 141 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 RAXQ9Y2V3 346 aa7.18□□□□□ -1.26
CSMD1-212ENST00000523387 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 LHBP01229 141 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 IGHG3P01860 377 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 TMEM78Q5T7P6 136 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 SCGB3A1Q96QR1 104 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 VKORC1Q9BQB6 163 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 C7orf69Q9H7B7 122 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 TMEM14CQ9P0S9 112 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 TRBV25-1A0A075B6N4 114 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 HOXA3O43365 443 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-212ENST00000523387 IGHV1-8P0DP01 117 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 MYCNOSP40205 109 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 GATA4P43694 442 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 H7C2G1 150 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 CEACAM3P40198 252 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 HERVK_113P61574 105 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 ZNF474Q6S9Z5 364 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-212ENST00000523387 CEND1Q8N111 149 aa7.17□□□□□ -1.26
CSMD1-212ENST00000523387 UFSP1Q6NVU6 142 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 RITA1Q96K30 269 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 C21orf62Q9NYP8 219 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 IGHV3-66A0A0C4DH42 116 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 WISP2O76076 250 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 ZNF562Q6V9R5 426 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 PGPEP1Q9NXJ5 209 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 CEP192Q8TEP8 1941 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 TRIOO75962 3097 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 SPINK8P0C7L1 97 aa7.16□□□□□ -1.26
CSMD1-212ENST00000523387 GEMIN7Q9H840 131 aaKnown RBP7.16□□□□□ -1.26
CSMD1-212ENST00000523387 MRPL35Q9NZE8 188 aaKnown RBP7.16□□□□□ -1.26
CSMD1-212ENST00000523387 VCANP13611 3396 aa7.15□□□□□ -1.26
CSMD1-212ENST00000523387 IGHV3-49A0A0A0MS15 119 aa7.15□□□□□ -1.26
CSMD1-212ENST00000523387 IGHV1-3A0A0C4DH29 117 aa7.15□□□□□ -1.26
CSMD1-212ENST00000523387 IGLL5B9A064 214 aa7.15□□□□□ -1.26
CSMD1-212ENST00000523387 IGLV3-9A0A075B6K5 115 aa7.15□□□□□ -1.27
CSMD1-212ENST00000523387 F5H697 171 aa7.15□□□□□ -1.27
CSMD1-212ENST00000523387 SCGB1A1P11684 91 aa7.15□□□□□ -1.27
CSMD1-212ENST00000523387 SRSF6Q13247 344 aaKnown RBP7.15□□□□□ -1.27
CSMD1-212ENST00000523387 LAGE3Q14657 143 aa7.15□□□□□ -1.27
CSMD1-212ENST00000523387 ECSCRQ19T08 205 aa7.15□□□□□ -1.27
CSMD1-212ENST00000523387 C12orf74Q32Q52 190 aa7.15□□□□□ -1.27
CSMD1-212ENST00000523387 NEGR1Q7Z3B1 354 aa7.15□□□□□ -1.27
CSMD1-212ENST00000523387 ZNF815PA8K554 130 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 TMEM178BH3BS89 294 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 M0R381 172 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 BSPH1Q075Z2 132 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 LINC01559Q495D7 138 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 SIGLEC15Q6ZMC9 328 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 MSRB1Q9NZV6 116 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 RIF1Q5UIP0 2472 aaKnown RBP7.14□□□□□ -1.27
CSMD1-212ENST00000523387 INS-IGF2F8WCM5 200 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 H3BRN7 92 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 TIMM23O14925 209 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 GATA1P15976 413 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-212ENST00000523387 SYT8Q8NBV8 401 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 TIMD4Q96H15 378 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 PRR25Q96S07 402 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 IGKV1-17P01599 117 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 EGR2P11161 476 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-212ENST00000523387 SRSF1Q07955 248 aaKnown RBP eCLIP7.14□□□□□ -1.27
CSMD1-212ENST00000523387 FOXE3Q13461 319 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 FOXI2Q6ZQN5 318 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 DLX4Q92988 240 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-212ENST00000523387 ANAPC13Q9BS18 74 aa7.14□□□□□ -1.27
CSMD1-212ENST00000523387 FGF6P10767 208 aa7.13□□□□□ -1.27
CSMD1-212ENST00000523387 ATP5G2Q06055 141 aa7.13□□□□□ -1.27
CSMD1-212ENST00000523387 MRAP2Q96G30 205 aa7.13□□□□□ -1.27
CSMD1-212ENST00000523387 K7EM74 188 aa7.13□□□□□ -1.27
CSMD1-212ENST00000523387 NBR2O15453 112 aa7.13□□□□□ -1.27
CSMD1-212ENST00000523387 IGLV2-23P01705 113 aa7.13□□□□□ -1.27
CSMD1-212ENST00000523387 ZNF883P0CG24 379 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms