RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 POM121L12Q8N7R1 296 aa13.23□□□□□ -0.29
SPIDR-220ENST00000522900 THAP6Q8TBB0 222 aa13.23□□□□□ -0.29
SPIDR-220ENST00000522900 NMES1Q9C002 83 aa13.23□□□□□ -0.29
SPIDR-220ENST00000522900 PRAF2O60831 178 aa13.22□□□□□ -0.29
SPIDR-220ENST00000522900 RLN2P04090 185 aa13.22□□□□□ -0.29
SPIDR-220ENST00000522900 P0DMU3 169 aa13.22□□□□□ -0.29
SPIDR-220ENST00000522900 FAM231AP0DMU4 169 aa13.22□□□□□ -0.29
SPIDR-220ENST00000522900 FAM231CP0DMU5 169 aa13.22□□□□□ -0.29
SPIDR-220ENST00000522900 OR5C1Q8NGR4 320 aa13.22□□□□□ -0.29
SPIDR-220ENST00000522900 FAM210BQ96KR6 192 aa13.22□□□□□ -0.29
SPIDR-220ENST00000522900 MARVELD1Q9BSK0 173 aa13.22□□□□□ -0.29
SPIDR-220ENST00000522900 NPCDR1Q9BY65 106 aa13.22□□□□□ -0.29
SPIDR-220ENST00000522900 LYRM9A8MSI8 78 aa13.21□□□□□ -0.29
SPIDR-220ENST00000522900 E5RGE8 158 aa13.21□□□□□ -0.29
SPIDR-220ENST00000522900 DEFB130BP0DP73 79 aa13.21□□□□□ -0.29
SPIDR-220ENST00000522900 DEFB130AP0DP74 79 aa13.21□□□□□ -0.29
SPIDR-220ENST00000522900 H2BFSP57053 126 aa13.21□□□□□ -0.29
SPIDR-220ENST00000522900 TAS2R60P59551 318 aa13.21□□□□□ -0.29
SPIDR-220ENST00000522900 GUK1Q16774 197 aa13.21□□□□□ -0.29
SPIDR-220ENST00000522900 TMEM256Q8N2U0 113 aa13.21□□□□□ -0.29
SPIDR-220ENST00000522900 OR10J6PQ8NGY7 276 aa13.21□□□□□ -0.29
SPIDR-220ENST00000522900 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
SPIDR-220ENST00000522900 NDUFB4O95168 129 aa13.2□□□□□ -0.3
SPIDR-220ENST00000522900 CT45A10P0DMU9 189 aa13.2□□□□□ -0.3
SPIDR-220ENST00000522900 PYYP10082 97 aa13.2□□□□□ -0.3
SPIDR-220ENST00000522900 CLINT1Q14677 625 aa13.2□□□□□ -0.3
SPIDR-220ENST00000522900 TMEM88Q6PEY1 159 aa13.2□□□□□ -0.3
SPIDR-220ENST00000522900 SLC25A31Q9H0C2 315 aa13.2□□□□□ -0.3
SPIDR-220ENST00000522900 DNAH6Q9C0G6 4158 aa13.2□□□□□ -0.3
SPIDR-220ENST00000522900 M0R3E3 92 aa13.19□□□□□ -0.3
SPIDR-220ENST00000522900 MPDU1O75352 247 aa13.19□□□□□ -0.3
SPIDR-220ENST00000522900 GFI1BQ5VTD9 330 aa13.19□□□□□ -0.3
SPIDR-220ENST00000522900 TMEM14CQ9P0S9 112 aa13.19□□□□□ -0.3
SPIDR-220ENST00000522900 NPIPB6E9PJ23 425 aa13.18□□□□□ -0.3
SPIDR-220ENST00000522900 J3KRW8 73 aa13.18□□□□□ -0.3
SPIDR-220ENST00000522900 M0R2N4 97 aa13.18□□□□□ -0.3
SPIDR-220ENST00000522900 ZNF253O75346 499 aa13.18□□□□□ -0.3
SPIDR-220ENST00000522900 CYCSP99999 105 aaKnown RBP13.18□□□□□ -0.3
SPIDR-220ENST00000522900 ERCC8Q13216 396 aa13.18□□□□□ -0.3
SPIDR-220ENST00000522900 MIR17HGQ75NE6 70 aa13.18□□□□□ -0.3
SPIDR-220ENST00000522900 PPP1R1CQ8WVI7 109 aa13.18□□□□□ -0.3
SPIDR-220ENST00000522900 SLC25A2Q9BXI2 301 aa13.18□□□□□ -0.3
SPIDR-220ENST00000522900 HIST1H1EP10412 219 aaKnown RBP13.17□□□□□ -0.3
SPIDR-220ENST00000522900 RNASE8Q8TDE3 154 aaKnown RBP13.17□□□□□ -0.3
SPIDR-220ENST00000522900 BLNKQ8WV28 456 aa13.17□□□□□ -0.3
SPIDR-220ENST00000522900 C16orf74Q96GX8 76 aa13.17□□□□□ -0.3
SPIDR-220ENST00000522900 FAM167A-AS1Q96KT0 104 aa13.17□□□□□ -0.3
SPIDR-220ENST00000522900 WDR61Q9GZS3 305 aaKnown RBP13.17□□□□□ -0.3
SPIDR-220ENST00000522900 TIMM9Q9Y5J7 89 aa13.17□□□□□ -0.3
SPIDR-220ENST00000522900 H7BYZ3 331 aa13.16□□□□□ -0.3
SPIDR-220ENST00000522900 SSNA1O43805 119 aa13.16□□□□□ -0.3
SPIDR-220ENST00000522900 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
SPIDR-220ENST00000522900 NOP10Q9NPE3 64 aaKnown RBP13.16□□□□□ -0.3
SPIDR-220ENST00000522900 TIMM8BQ9Y5J9 83 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-220ENST00000522900 TRAV12-3A0A0B4J271 114 aa13.15□□□□□ -0.3
SPIDR-220ENST00000522900 F5H768 121 aa13.15□□□□□ -0.3
SPIDR-220ENST00000522900 DEFA1P59665 94 aa13.15□□□□□ -0.3
SPIDR-220ENST00000522900 DEFA3P59666 94 aa13.15□□□□□ -0.3
SPIDR-220ENST00000522900 MRPL53Q96EL3 112 aaKnown RBP13.15□□□□□ -0.3
SPIDR-220ENST00000522900 C20orf144Q9BQM9 153 aa13.15□□□□□ -0.3
SPIDR-220ENST00000522900 IGLV2-18A0A075B6J9 118 aa13.14□□□□□ -0.31
SPIDR-220ENST00000522900 CBY3A6NI87 242 aa13.14□□□□□ -0.31
SPIDR-220ENST00000522900 MPC2O95563 127 aa13.14□□□□□ -0.31
SPIDR-220ENST00000522900 LEPP41159 167 aa13.14□□□□□ -0.31
SPIDR-220ENST00000522900 ZNF493Q6ZR52 646 aa13.14□□□□□ -0.31
SPIDR-220ENST00000522900 UBE2DNLQ8IWF7 75 aa13.14□□□□□ -0.31
SPIDR-220ENST00000522900 TMEM263Q8WUH6 116 aaKnown RBP13.14□□□□□ -0.31
SPIDR-220ENST00000522900 ODF3Q96PU9 254 aa13.14□□□□□ -0.31
SPIDR-220ENST00000522900 AGPAT4-IT1Q9H0P7 198 aa13.14□□□□□ -0.31
SPIDR-220ENST00000522900 PDE6HQ13956 83 aa13.13□□□□□ -0.31
SPIDR-220ENST00000522900 SMIM3Q9BZL3 60 aa13.13□□□□□ -0.31
SPIDR-220ENST00000522900 PRELID1Q9Y255 219 aa13.13□□□□□ -0.31
SPIDR-220ENST00000522900 ATP5G1P05496 136 aa13.12□□□□□ -0.31
SPIDR-220ENST00000522900 OR10J4P0C629 311 aa13.12□□□□□ -0.31
SPIDR-220ENST00000522900 NBEAP1P0C6P0 100 aa13.12□□□□□ -0.31
SPIDR-220ENST00000522900 ATP5G3P48201 142 aa13.12□□□□□ -0.31
SPIDR-220ENST00000522900 ICAM4Q14773 271 aa13.12□□□□□ -0.31
SPIDR-220ENST00000522900 ATP5SQ99766 215 aa13.12□□□□□ -0.31
SPIDR-220ENST00000522900 OR51M1Q9H341 326 aa13.12□□□□□ -0.31
SPIDR-220ENST00000522900 BATF3Q9NR55 127 aa13.12□□□□□ -0.31
SPIDR-220ENST00000522900 HSPB11Q9Y547 144 aa13.12□□□□□ -0.31
SPIDR-220ENST00000522900 IGKV2-40A0A087WW87 121 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-220ENST00000522900 RTL8CO15255 209 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 IGKV2D-40P01614 121 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-220ENST00000522900 RPL12P30050 165 aaKnown RBP13.11□□□□□ -0.31
SPIDR-220ENST00000522900 CD300CQ08708 224 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 LGALS9BQ3B8N2 356 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 RNF212Q495C1 297 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 FAM122CQ6P4D5 195 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 CCDC28AQ8IWP9 274 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 C15orf53Q8NAA6 179 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 FXYD5Q96DB9 178 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 FAM19A4Q96LR4 140 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 FUT9Q9Y231 359 aa13.11□□□□□ -0.31
SPIDR-220ENST00000522900 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
SPIDR-220ENST00000522900 ZNF503Q96F45 646 aa13.1□□□□□ -0.31
SPIDR-220ENST00000522900 LINC00477Q96M19 166 aa13.1□□□□□ -0.31
SPIDR-220ENST00000522900 VGLL1Q99990 258 aa13.1□□□□□ -0.31
SPIDR-220ENST00000522900 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
SPIDR-220ENST00000522900 AAMDCQ9H7C9 122 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms