RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SERF2P84101 59 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 TNXAQ16473 311 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 SPANXN5Q5MJ07 72 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 Q5VSD8 79 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 RPL7L1Q6DKI1 246 aaKnown RBP4.69□□□□□ -1.66
SDCBP-210ENST00000522843 SSX9Q7RTT3 188 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 LYPD1Q8N2G4 141 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 OR10P1Q8NGE3 313 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 OR1S2Q8NGQ3 325 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 OR5C1Q8NGR4 320 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 RNASEH2CQ8TDP1 164 aaKnown RBP4.69□□□□□ -1.66
SDCBP-210ENST00000522843 MARC2Q969Z3 335 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 GNPNAT1Q96EK6 184 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-210ENST00000522843 ZNF414Q96IQ9 312 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 ATP5SQ99766 215 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 ZNF471Q9BX82 626 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-210ENST00000522843 COMMD5Q9GZQ3 224 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 TIMM9Q9Y5J7 89 aa4.69□□□□□ -1.66
SDCBP-210ENST00000522843 ZNF705EA8MWA4 302 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-210ENST00000522843 UMAD1C9J7I0 102 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 E7EUB6 86 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 MPDU1O75352 247 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 CST7O76096 145 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 CRYGCP07315 174 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 NMBP08949 121 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 METTL15P1P0C7V9 234 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 RNASE2P10153 161 aaKnown RBP4.68□□□□□ -1.66
SDCBP-210ENST00000522843 IAPPP10997 89 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 SULT1A2P50226 295 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 SUB1P53999 127 aaKnown RBP eCLIP4.68□□□□□ -1.66
SDCBP-210ENST00000522843 DLK1P80370 383 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 LRP2P98164 4655 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 CST9LP1Q5W188 147 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 DPPA3Q6W0C5 159 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 EIF4E3Q8N5X7 224 aaKnown RBP4.68□□□□□ -1.66
SDCBP-210ENST00000522843 OR2G3Q8NGZ4 309 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 PSMG3Q9BT73 122 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-210ENST00000522843 NPVFQ9HCQ7 196 aa4.68□□□□□ -1.66
SDCBP-210ENST00000522843 TRAV1-1A0A0B4J248 108 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 IGLC7A0M8Q6 106 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 OR4C46A6NHA9 309 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 IFNA5P01569 189 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 RPL27AP46776 148 aaKnown RBP4.67□□□□□ -1.66
SDCBP-210ENST00000522843 RAB14P61106 215 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 WT1-ASQ06250 92 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 SLC38A11Q08AI6 406 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 PIK3CD-AS1Q5SR53 167 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 UBE2DNLQ8IWF7 75 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 SLC24A4Q8NFF2 622 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 OR1P1Q8NH06 330 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 TMEM190Q8WZ59 177 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 TMEM147Q9BVK8 224 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 WDR61Q9GZS3 305 aaKnown RBP4.67□□□□□ -1.66
SDCBP-210ENST00000522843 ENY2Q9NPA8 101 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 UQCC1Q9NVA1 299 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 WDR83OSQ9Y284 106 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 UFC1Q9Y3C8 167 aa4.67□□□□□ -1.66
SDCBP-210ENST00000522843 IGLV11-55A0A075B6I3 123 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 IGHV3OR16-8A0A075B7F1 116 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 CORTO00230 105 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 MBP02144 154 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 MIFP14174 115 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 MYOD1P15172 320 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 AREGP15514 252 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 NPY1RP25929 384 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 ATP6V0CP27449 155 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 GPR183P32249 361 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 SNCAP37840 140 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 TFPI2P48307 235 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 HOXA1P49639 335 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-210ENST00000522843 RNF212Q495C1 297 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 ETFRF1Q6IPR1 90 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 PET117Q6UWS5 81 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 ALKAL2Q6UX46 152 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 TMEM144Q7Z5S9 345 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 C6orf223Q8N319 242 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 OR10W1Q8NGF6 305 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 ZNF502Q8TBZ5 544 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 SCGB1C1Q8TD33 95 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 MBD3L1Q8WWY6 194 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 EEF1AKMT3Q96AZ1 226 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 ATP6V0BQ99437 205 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 RNF2Q99496 336 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 SMIM3Q9BZL3 60 aa4.66□□□□□ -1.66
SDCBP-210ENST00000522843 NBDYA0A0U1RRE5 68 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 RAB19A4D1S5 217 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 H3BP45 60 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 ZNF207O43670 478 aaKnown RBP4.65□□□□□ -1.67
SDCBP-210ENST00000522843 NDUFS6O75380 124 aaKnown RBP4.65□□□□□ -1.67
SDCBP-210ENST00000522843 OR13C7P0DN81 318 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 OPRK1P41145 380 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 RPL29P47914 159 aaKnown RBP4.65□□□□□ -1.67
SDCBP-210ENST00000522843 CLINT1Q14677 625 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 LEMD1Q68G75 181 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 FAM24BQ8N5W8 94 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 THAP8Q8NA92 274 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 CSNK1G2-AS1Q8NCQ2 148 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 TMED6Q8WW62 240 aa4.65□□□□□ -1.67
SDCBP-210ENST00000522843 F11RQ9Y624 299 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms