RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 HOXB5P09067 269 aa11.22□□□□□ -0.61
TRAM1-204ENST00000521049 FAUP35544 74 aaKnown RBP11.22□□□□□ -0.61
TRAM1-204ENST00000521049 FUSP35637 526 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAM1-204ENST00000521049 AP3S2P59780 193 aa11.22□□□□□ -0.61
TRAM1-204ENST00000521049 Q6ZTI0 123 aa11.22□□□□□ -0.61
TRAM1-204ENST00000521049 NFE4Q86UQ8 179 aa11.22□□□□□ -0.61
TRAM1-204ENST00000521049 TOMM5Q8N4H5 51 aa11.22□□□□□ -0.61
TRAM1-204ENST00000521049 SRRQ9GZT4 340 aa11.22□□□□□ -0.61
TRAM1-204ENST00000521049 VPS13BQ7Z7G8 4022 aa11.22□□□□□ -0.61
TRAM1-204ENST00000521049 A6NHS1 94 aa11.21□□□□□ -0.61
TRAM1-204ENST00000521049 PRAC2D3DTV9 90 aa11.21□□□□□ -0.61
TRAM1-204ENST00000521049 FNDC10F2Z333 226 aa11.21□□□□□ -0.61
TRAM1-204ENST00000521049 KRTAP10-1P60331 282 aa11.21□□□□□ -0.61
TRAM1-204ENST00000521049 ZNF431Q8TF32 576 aaPredicted RBP11.21□□□□□ -0.61
TRAM1-204ENST00000521049 ODF3Q96PU9 254 aa11.21□□□□□ -0.61
TRAM1-204ENST00000521049 SLC25A21Q9BQT8 299 aaPredicted RBP11.21□□□□□ -0.61
TRAM1-204ENST00000521049 PSENENQ9NZ42 101 aa11.21□□□□□ -0.61
TRAM1-204ENST00000521049 TRGV2A0A075B6R0 118 aa11.2□□□□□ -0.62
TRAM1-204ENST00000521049 TRAV12-3A0A0B4J271 114 aa11.2□□□□□ -0.62
TRAM1-204ENST00000521049 LEPP41159 167 aa11.2□□□□□ -0.62
TRAM1-204ENST00000521049 POLR2GP62487 172 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAM1-204ENST00000521049 TEPPQ6URK8 271 aa11.2□□□□□ -0.62
TRAM1-204ENST00000521049 LINC00305Q7Z4B0 112 aa11.2□□□□□ -0.62
TRAM1-204ENST00000521049 BPIFA4PQ86YQ2 179 aa11.2□□□□□ -0.62
TRAM1-204ENST00000521049 ZBTB8BQ8NAP8 495 aaPredicted RBP11.2□□□□□ -0.62
TRAM1-204ENST00000521049 SMIM8Q96KF7 97 aa11.2□□□□□ -0.62
TRAM1-204ENST00000521049 TNFRSF18Q9Y5U5 241 aa11.2□□□□□ -0.62
TRAM1-204ENST00000521049 A0A087WTM6 91 aa11.19□□□□□ -0.62
TRAM1-204ENST00000521049 ZNF324O75467 553 aaPredicted RBP11.19□□□□□ -0.62
TRAM1-204ENST00000521049 NXPH4O95158 308 aa11.19□□□□□ -0.62
TRAM1-204ENST00000521049 CT45A10P0DMU9 189 aa11.19□□□□□ -0.62
TRAM1-204ENST00000521049 PPP1R1AQ13522 171 aa11.19□□□□□ -0.62
TRAM1-204ENST00000521049 DEDD2Q8WXF8 326 aa11.19□□□□□ -0.62
TRAM1-204ENST00000521049 PXMP4Q9Y6I8 212 aa11.19□□□□□ -0.62
TRAM1-204ENST00000521049 MYCBP2O75592 4640 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 TRAV9-2A0A087WT02 112 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 GOSR2O14653 212 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 SNRPCP09234 159 aaKnown RBP11.18□□□□□ -0.62
TRAM1-204ENST00000521049 INPP1P49441 399 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 RRAS2P62070 204 aaPredicted RBP11.18□□□□□ -0.62
TRAM1-204ENST00000521049 ICAM4Q14773 271 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 BAK1Q16611 211 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 TMEM14EPQ6UXP3 125 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 ZNF680Q8NEM1 530 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 SAT2Q96F10 170 aaPredicted RBP11.18□□□□□ -0.62
TRAM1-204ENST00000521049 SDHCQ99643 169 aaPredicted RBP11.18□□□□□ -0.62
TRAM1-204ENST00000521049 LINC00467Q9BRT7 94 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 GSN-AS1Q9NRJ2 163 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 ICOSQ9Y6W8 199 aa11.18□□□□□ -0.62
TRAM1-204ENST00000521049 NPIPB6E9PJ23 425 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 FAM229AH3BQW9 127 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 J3KRW8 73 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 SLC17A3O00476 420 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 PAX4O43316 350 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 SMR3BP02814 79 aaPredicted RBP11.17□□□□□ -0.62
TRAM1-204ENST00000521049 SLC25A5P05141 298 aaKnown RBP11.17□□□□□ -0.62
TRAM1-204ENST00000521049 SLC38A11Q08AI6 406 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 CNPY1Q3B7I2 92 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 TRIQKQ629K1 86 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 OR10P1Q8NGE3 313 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 FUT9Q9Y231 359 aa11.17□□□□□ -0.62
TRAM1-204ENST00000521049 TRGV1A0A0A0MS02 117 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 LINC00854A0A1B0GVQ3 168 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 K7EP13 123 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 CCNKO75909 580 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 IGLC2P0DOY2 106 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 GCSHP23434 173 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 SLAQ13239 276 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 LYPD5Q6UWN5 251 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 ZNF546Q86UE3 836 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 TMEM37Q8WXS4 190 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 MDFICQ9P1T7 246 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 MGAT4CQ9UBM8 478 aa11.16□□□□□ -0.62
TRAM1-204ENST00000521049 H3BQ15 152 aa11.15□□□□□ -0.62
TRAM1-204ENST00000521049 H3BTX0 84 aa11.15□□□□□ -0.62
TRAM1-204ENST00000521049 SPINK4O60575 86 aa11.15□□□□□ -0.62
TRAM1-204ENST00000521049 METTL15P1P0C7V9 234 aa11.15□□□□□ -0.62
TRAM1-204ENST00000521049 DNAH10OSP0CZ25 163 aa11.15□□□□□ -0.62
TRAM1-204ENST00000521049 UBE2MP61081 183 aaKnown RBP11.15□□□□□ -0.62
TRAM1-204ENST00000521049 GUK1Q16774 197 aa11.15□□□□□ -0.62
TRAM1-204ENST00000521049 GGACTQ9BVM4 153 aa11.15□□□□□ -0.62
TRAM1-204ENST00000521049 BATF3Q9NR55 127 aa11.15□□□□□ -0.62
TRAM1-204ENST00000521049 AGPAT2O15120 278 aa11.14□□□□□ -0.63
TRAM1-204ENST00000521049 SSSCA1O60232 199 aa11.14□□□□□ -0.63
TRAM1-204ENST00000521049 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
TRAM1-204ENST00000521049 IL7P13232 177 aa11.14□□□□□ -0.63
TRAM1-204ENST00000521049 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
TRAM1-204ENST00000521049 OPCMLQ14982 345 aa11.14□□□□□ -0.63
TRAM1-204ENST00000521049 MRPL23Q16540 153 aaKnown RBP11.14□□□□□ -0.63
TRAM1-204ENST00000521049 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
TRAM1-204ENST00000521049 EIF4E3Q8N5X7 224 aaKnown RBP11.14□□□□□ -0.63
TRAM1-204ENST00000521049 ST6GAL2Q96JF0 529 aa11.14□□□□□ -0.63
TRAM1-204ENST00000521049 PRO0255Q9UI72 69 aa11.14□□□□□ -0.63
TRAM1-204ENST00000521049 C9orf170A2RU37 121 aa11.13□□□□□ -0.63
TRAM1-204ENST00000521049 C7orf71A4D174 169 aa11.13□□□□□ -0.63
TRAM1-204ENST00000521049 NAP1L6A6NFF2 107 aa11.13□□□□□ -0.63
TRAM1-204ENST00000521049 TCL1AP56279 114 aa11.13□□□□□ -0.63
TRAM1-204ENST00000521049 TAS2R30P59541 319 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms