RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 LINC00588Q9Y4M8 146 aa13.73□□□□□ -0.21
PABPC1-215ENST00000520804 FAM25EA8MYX2 175 aa13.72□□□□□ -0.21
PABPC1-215ENST00000520804 LYRM1O43325 122 aa13.72□□□□□ -0.21
PABPC1-215ENST00000520804 CST7O76096 145 aa13.72□□□□□ -0.21
PABPC1-215ENST00000520804 CAV2P51636 162 aa13.72□□□□□ -0.21
PABPC1-215ENST00000520804 LINC00612Q8N6U2 182 aa13.72□□□□□ -0.21
PABPC1-215ENST00000520804 C11orf1Q9H5F2 150 aa13.72□□□□□ -0.21
PABPC1-215ENST00000520804 WDR83OSQ9Y284 106 aa13.72□□□□□ -0.21
PABPC1-215ENST00000520804 TRAV5A0A0B4J249 113 aa13.71□□□□□ -0.21
PABPC1-215ENST00000520804 TCRBP04435 133 aa13.71□□□□□ -0.21
PABPC1-215ENST00000520804 TNP2Q05952 138 aa13.71□□□□□ -0.21
PABPC1-215ENST00000520804 GUK1Q16774 197 aa13.71□□□□□ -0.21
PABPC1-215ENST00000520804 MIC13Q5XKP0 118 aa13.71□□□□□ -0.21
PABPC1-215ENST00000520804 CCDC28AQ8IWP9 274 aa13.71□□□□□ -0.21
PABPC1-215ENST00000520804 OR1L4Q8NGR5 311 aa13.71□□□□□ -0.21
PABPC1-215ENST00000520804 ZNF431Q8TF32 576 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-215ENST00000520804 UQCC1Q9NVA1 299 aa13.71□□□□□ -0.21
PABPC1-215ENST00000520804 TRAV6A0A075B6T7 132 aa13.7□□□□□ -0.22
PABPC1-215ENST00000520804 C5orf51A6NDU8 294 aa13.7□□□□□ -0.22
PABPC1-215ENST00000520804 FAM24AA6NFZ4 105 aa13.7□□□□□ -0.22
PABPC1-215ENST00000520804 VWC2Q2TAL6 325 aa13.7□□□□□ -0.22
PABPC1-215ENST00000520804 C6orf223Q8N319 242 aa13.7□□□□□ -0.22
PABPC1-215ENST00000520804 C2orf50Q96LR7 162 aa13.7□□□□□ -0.22
PABPC1-215ENST00000520804 ODF3Q96PU9 254 aa13.7□□□□□ -0.22
PABPC1-215ENST00000520804 SEC22CQ9BRL7 303 aa13.7□□□□□ -0.22
PABPC1-215ENST00000520804 CT45A10P0DMU9 189 aa13.69□□□□□ -0.22
PABPC1-215ENST00000520804 CLINT1Q14677 625 aa13.69□□□□□ -0.22
PABPC1-215ENST00000520804 SSX7Q7RTT5 188 aa13.69□□□□□ -0.22
PABPC1-215ENST00000520804 PFDN5Q99471 154 aa13.69□□□□□ -0.22
PABPC1-215ENST00000520804 NUDT15Q9NV35 164 aa13.69□□□□□ -0.22
PABPC1-215ENST00000520804 ZNF586Q9NXT0 402 aa13.69□□□□□ -0.22
PABPC1-215ENST00000520804 MUC4Q99102 2169 aa13.69□□□□□ -0.22
PABPC1-215ENST00000520804 NPIPB6E9PJ23 425 aa13.68□□□□□ -0.22
PABPC1-215ENST00000520804 J3KRW8 73 aa13.68□□□□□ -0.22
PABPC1-215ENST00000520804 ZNF253O75346 499 aa13.68□□□□□ -0.22
PABPC1-215ENST00000520804 PVALBP20472 110 aaPredicted RBP13.68□□□□□ -0.22
PABPC1-215ENST00000520804 LEPP41159 167 aa13.68□□□□□ -0.22
PABPC1-215ENST00000520804 RPL29P47914 159 aaKnown RBP13.68□□□□□ -0.22
PABPC1-215ENST00000520804 OR5I1Q13606 314 aa13.68□□□□□ -0.22
PABPC1-215ENST00000520804 C12orf45Q8N5I9 185 aaPredicted RBP13.68□□□□□ -0.22
PABPC1-215ENST00000520804 TRAV26-1A0A087WT03 109 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 TRAV12-3A0A0B4J271 114 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 GAGE12BA1L429 117 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 SNURFLB1AK76 121 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 GAGE7O76087 117 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 RLN2P04090 185 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 GAGE12FP0CL80 117 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 GAGE12GP0CL81 117 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 GAGE12IP0CL82 117 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 M6PRP20645 277 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 SULT1A1P50225 295 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 GNPNAT1Q96EK6 184 aaPredicted RBP13.67□□□□□ -0.22
PABPC1-215ENST00000520804 ZNF503Q96F45 646 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 LYRM2Q9NU23 88 aaPredicted RBP13.67□□□□□ -0.22
PABPC1-215ENST00000520804 SLC39A9Q9NUM3 307 aa13.67□□□□□ -0.22
PABPC1-215ENST00000520804 ABCA13Q86UQ4 5058 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 LRP1BQ9NZR2 4599 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 UBE2L5PA0A1B0GUS4 154 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 IGSF23A1L1A6 192 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 HOXA5P20719 270 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 S100A11P31949 105 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 BAXQ07812 192 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 TMEM252Q8N6L7 170 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 RXFP4Q8TDU9 374 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 CHAC2Q8WUX2 184 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 MRPL53Q96EL3 112 aaKnown RBP13.66□□□□□ -0.22
PABPC1-215ENST00000520804 PYGO2Q9BRQ0 406 aa13.66□□□□□ -0.22
PABPC1-215ENST00000520804 HSPG2P98160 4391 aa13.65□□□□□ -0.22
PABPC1-215ENST00000520804 TRBV19A0A075B6N1 114 aa13.65□□□□□ -0.22
PABPC1-215ENST00000520804 S100A10P60903 97 aa13.65□□□□□ -0.22
PABPC1-215ENST00000520804 IL15RAQ13261 267 aa13.65□□□□□ -0.22
PABPC1-215ENST00000520804 STX12Q86Y82 276 aa13.65□□□□□ -0.22
PABPC1-215ENST00000520804 Q9H8V8 135 aa13.65□□□□□ -0.22
PABPC1-215ENST00000520804 A0A0J9YY99 117 aa13.64□□□□□ -0.23
PABPC1-215ENST00000520804 C16orf90A8MZG2 172 aa13.64□□□□□ -0.23
PABPC1-215ENST00000520804 M0R3E3 92 aa13.64□□□□□ -0.23
PABPC1-215ENST00000520804 H2AFB2P0C5Z0 115 aa13.64□□□□□ -0.23
PABPC1-215ENST00000520804 HBG1P69891 147 aa13.64□□□□□ -0.23
PABPC1-215ENST00000520804 HBG2P69892 147 aa13.64□□□□□ -0.23
PABPC1-215ENST00000520804 DAZ2Q13117 558 aaKnown RBP13.64□□□□□ -0.23
PABPC1-215ENST00000520804 RAB32Q13637 225 aa13.64□□□□□ -0.23
PABPC1-215ENST00000520804 TMEM14CQ9P0S9 112 aa13.64□□□□□ -0.23
PABPC1-215ENST00000520804 H3BNG1 76 aa13.63□□□□□ -0.23
PABPC1-215ENST00000520804 SLC25A5P05141 298 aaKnown RBP13.63□□□□□ -0.23
PABPC1-215ENST00000520804 ATP6V1FQ16864 119 aa13.63□□□□□ -0.23
PABPC1-215ENST00000520804 CCDC32Q9BV29 185 aa13.63□□□□□ -0.23
PABPC1-215ENST00000520804 NDUFB4O95168 129 aa13.62□□□□□ -0.23
PABPC1-215ENST00000520804 HIST1H1EP10412 219 aaKnown RBP13.62□□□□□ -0.23
PABPC1-215ENST00000520804 FGF7P21781 194 aa13.62□□□□□ -0.23
PABPC1-215ENST00000520804 ERCC8Q13216 396 aa13.62□□□□□ -0.23
PABPC1-215ENST00000520804 Q6ZTI0 123 aa13.62□□□□□ -0.23
PABPC1-215ENST00000520804 UPK3BQ9BT76 320 aa13.62□□□□□ -0.23
PABPC1-215ENST00000520804 TMPRSS5Q9H3S3 457 aa13.62□□□□□ -0.23
PABPC1-215ENST00000520804 NDUFA13Q9P0J0 144 aa13.62□□□□□ -0.23
PABPC1-215ENST00000520804 PRELID1Q9Y255 219 aa13.62□□□□□ -0.23
PABPC1-215ENST00000520804 C7orf71A4D174 169 aa13.61□□□□□ -0.23
PABPC1-215ENST00000520804 KLLNB2CW77 178 aa13.61□□□□□ -0.23
PABPC1-215ENST00000520804 MPDU1O75352 247 aa13.61□□□□□ -0.23
PABPC1-215ENST00000520804 PDE6HQ13956 83 aa13.61□□□□□ -0.23
PABPC1-215ENST00000520804 ESRGQ1W209 222 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms