RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 USP9XQ93008 2570 aaPredicted RBP1.94□□□□□ -2.1
SREK1-208ENST00000520580 PAPPAQ13219 1627 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 ZNF292O60281 2723 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 MYO5AQ9Y4I1 1855 aaKnown RBP1.94□□□□□ -2.1
SREK1-208ENST00000520580 A0A1B0GW64 132 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 TMEM189A5PLL7 270 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 MEIS3P1A6NDR6 274 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 J3QQQ9 107 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 TIMM17BO60830 172 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 TNFSF15O95150 251 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 GADD45GO95257 159 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 MT-ND6P03923 174 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 UBBP0CG47 229 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 MGST1P10620 155 aaKnown RBP1.94□□□□□ -2.1
SREK1-208ENST00000520580 GTF2A1P52655 376 aaPredicted RBP1.94□□□□□ -2.1
SREK1-208ENST00000520580 RPL26P61254 145 aaKnown RBP1.94□□□□□ -2.1
SREK1-208ENST00000520580 RPS28P62857 69 aaKnown RBP1.94□□□□□ -2.1
SREK1-208ENST00000520580 NNATQ16517 81 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 BRMS1LQ5PSV4 323 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 C4orf22Q6V702 233 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 ZNF418Q8TF45 676 aaPredicted RBP1.94□□□□□ -2.1
SREK1-208ENST00000520580 NDUFB11Q9NX14 153 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 HSPB8Q9UJY1 196 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 RPL26L1Q9UNX3 145 aaKnown RBP1.94□□□□□ -2.1
SREK1-208ENST00000520580 COL24A1Q17RW2 1714 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 C5orf42Q9H799 3197 aa1.94□□□□□ -2.1
SREK1-208ENST00000520580 KMT2BQ9UMN6 2715 aaPredicted RBP1.93□□□□□ -2.1
SREK1-208ENST00000520580 TPRP12270 2363 aaKnown RBP1.93□□□□□ -2.1
SREK1-208ENST00000520580 NRXN3Q9Y4C0 1643 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 C9JAW5 83 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 MT-ND4LP03901 98 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 CTSDP07339 412 aaPredicted RBP1.93□□□□□ -2.1
SREK1-208ENST00000520580 HLA-EP13747 358 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 GPX2P18283 190 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 TMEM155Q4W5P6 130 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 BCL2L10Q9HD36 194 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 NIT2Q9NQR4 276 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 HIGD1AQ9Y241 93 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 CEP152O94986 1710 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 PEAK1Q9H792 1746 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 NRXN1Q9ULB1 1477 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 RP1P56715 2156 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 MUC21A0A0G2JKD1 596 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 MUC21A0A140T8X8 626 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 RAB5CP51148 216 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 VMA21Q3ZAQ7 101 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 LINC00305Q7Z4B0 112 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 OR8J3Q8NGG0 315 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 PRO0461Q9UI25 63 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 PSORS1C2Q9UIG4 136 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 KIAA1107Q9UPP5 1409 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 MYO9BQ13459 2157 aa1.93□□□□□ -2.1
SREK1-208ENST00000520580 NUMA1Q14980 2115 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 USP34Q70CQ2 3546 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 A0A0G2JQZ4 141 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 A0A1B0GX51 115 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 OR51F1A6NGY5 319 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 RER1O15258 196 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 COX4I1P13073 169 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 KRTAP12-2P59991 146 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 TSTD1Q8NFU3 115 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 C20orf166-AS1Q96NR2 134 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 SMIM3Q9BZL3 60 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 PARP4Q9UKK3 1724 aaKnown RBP1.92□□□□□ -2.1
SREK1-208ENST00000520580 SHROOM3Q8TF72 1996 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 MPDZO75970 2070 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 TRAV1-1A0A0B4J248 108 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 PIK3C2AO00443 1686 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 IGLV3-19P01714 112 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 RNASE2P10153 161 aaKnown RBP1.92□□□□□ -2.1
SREK1-208ENST00000520580 RPL35P42766 123 aaKnown RBP1.92□□□□□ -2.1
SREK1-208ENST00000520580 MYL5Q02045 173 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 ARHGEF5Q12774 1597 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 SS18Q15532 418 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 TAF9Q16594 264 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 NDUFA5Q16718 116 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 RNASE10Q5GAN6 216 aaKnown RBP1.92□□□□□ -2.1
SREK1-208ENST00000520580 MICAL3Q7RTP6 2002 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 PLEKHH2Q8IVE3 1493 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 LRRC18Q8N456 261 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 TVP23CQ96ET8 276 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 VPS25Q9BRG1 176 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 Q9BRP9 147 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 PAPPA2Q9BXP8 1791 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 TAF9BQ9HBM6 251 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 COPZ2Q9P299 210 aa1.92□□□□□ -2.1
SREK1-208ENST00000520580 WDFY4Q6ZS81 3184 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 PTPRZ1P23471 2315 aaPredicted RBP1.91□□□□□ -2.1
SREK1-208ENST00000520580 XRN1Q8IZH2 1706 aaKnown RBP1.91□□□□□ -2.1
SREK1-208ENST00000520580 PRXQ9BXM0 1461 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 ARHGAP31Q2M1Z3 1444 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 ARRDC5A6NEK1 342 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 NDUFA2O43678 99 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 HIST1H2BKO60814 126 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 IGKV1-17P01599 117 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 HIST1H2BJP06899 126 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 METTL15P1P0C7V9 234 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 ZNF705BP0CI00 300 aaPredicted RBP1.91□□□□□ -2.1
SREK1-208ENST00000520580 NDUFA6P56556 154 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms