RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ZFP30Q9Y2G7 519 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 NAIPQ13075 1403 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 COL4A5P29400 1685 aa1.9□□□□□ -2.1
HMGB1P46-201ENST00000520062 TCOF1Q13428 1488 aaKnown RBP1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 M0R143 59 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 TIMM17BO60830 172 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 RPL35P42766 123 aaKnown RBP1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 DYNLT3P51808 116 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 ISOC1Q96CN7 298 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 SLC25A21Q9BQT8 299 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 SPANXDQ9BXN6 97 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 TAF9BQ9HBM6 251 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 POPDC3Q9HBV1 291 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 NAT8BQ9UHF3 227 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 ERG28Q9UKR5 140 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 KIAA1551Q9HCM1 1747 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 ARHGEF11O15085 1522 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 TNS3Q68CZ2 1445 aa1.9□□□□□ -2.11
HMGB1P46-201ENST00000520062 CECR2Q9BXF3 1484 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 RAPGEF2Q9Y4G8 1499 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 RTTNQ86VV8 2226 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 FER1L6Q2WGJ9 1857 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 HLA-EP13747 358 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 PLCXD2Q0VAA5 305 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 EIF5AL1Q6IS14 154 aaKnown RBP1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 Q8IYB0 196 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 OR8I2Q8N0Y5 310 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 TCTEX1D1Q8N7M0 179 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 C15orf53Q8NAA6 179 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 TMEM229BQ8NBD8 167 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 TP53RKQ96S44 253 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 GPX7Q96SL4 187 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 PSMG3Q9BT73 122 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 RTL8AQ9BWD3 113 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 NPCDR1Q9BY65 106 aa1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 ZFC3H1O60293 1989 aaKnown RBP1.89□□□□□ -2.11
HMGB1P46-201ENST00000520062 CHD1O14646 1710 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 BCL9LQ86UU0 1499 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 ANKRD36BQ8N2N9 1353 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 TRAV5A0A0B4J249 113 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 IFITM5A6NNB3 132 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 C9JAW5 83 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 HYPMO75409 117 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 OR2H2O95918 312 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 TRGC2P03986 189 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 BCL2P10415 239 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 HIST1H1BP16401 226 aaKnown RBP1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 FGF7P21781 194 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 POLR2HP52434 150 aaKnown RBP1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 HIST1H1AQ02539 215 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 NEDD8Q15843 81 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 HSD17B12Q53GQ0 312 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 TEX261Q6UWH6 196 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 TCTE3Q8IZS6 198 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 OR5A2Q8NGI9 324 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 ZNF418Q8TF45 676 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 C4orf3Q8WVX3 66 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 MAGOHBQ96A72 148 aaKnown RBP1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 OR2H1Q9GZK4 316 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 RERGLQ9H628 205 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 HIGD1AQ9Y241 93 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 OVOS2A0A0G2JMS6 1433 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 TANC2Q9HCD6 1990 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 NUP210LQ5VU65 1888 aa1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 CHD3Q12873 2000 aaKnown RBP1.88□□□□□ -2.11
HMGB1P46-201ENST00000520062 DENND4CQ5VZ89 1909 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 TRAV30A0A087WSZ9 112 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 IGKV2-40A0A087WW87 121 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 TMEM218A2RU14 115 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 TLCD2A6NGC4 264 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 DISP2A7MBM2 1401 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 GNG7O60262 68 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 PHLPP1O60346 1717 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 NCR2O95944 276 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 IGKV2D-40P01614 121 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 APODP05090 189 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 CSN2P05814 226 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 RPL7P18124 248 aaKnown RBP1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 RPS3P23396 243 aaKnown RBP eCLIP1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 KDELR1P24390 212 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 INSL3P51460 131 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 MAXP61244 160 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 RPS25P62851 125 aaKnown RBP1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 DEFB113Q30KQ7 82 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 MMGT1Q8N4V1 131 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 ANKRD31Q8N7Z5 1873 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 SMIM3Q9BZL3 60 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 CACYBPQ9HB71 228 aaKnown RBP1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 SCP2D1Q9UJQ7 156 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 MED31Q9Y3C7 131 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 SNURFQ9Y675 71 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 CASZ1Q86V15 1759 aa1.87□□□□□ -2.11
HMGB1P46-201ENST00000520062 BRWD1Q9NSI6 2320 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 OBSL1O75147 1896 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 IGKV3-7A0A075B6H7 116 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 HCRTO43612 131 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 DPM2O94777 84 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 IL9P15248 144 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 HIST1H1DP16402 221 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms