RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 PRB4P10163 310 aaPredicted RBP10.68□□□□□ -0.7
PABPC1-208ENST00000519004 LINC01559Q495D7 138 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 DOCK10Q96BY6 2186 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 GAS8-AS1O95177 125 aa10.67□□□□□ -0.7
PABPC1-208ENST00000519004 UBE2D1P51668 147 aa10.67□□□□□ -0.7
PABPC1-208ENST00000519004 ATP5J2P56134 94 aa10.67□□□□□ -0.7
PABPC1-208ENST00000519004 PPP1R27Q86WC6 154 aa10.67□□□□□ -0.7
PABPC1-208ENST00000519004 SLC25A45Q8N413 288 aa10.67□□□□□ -0.7
PABPC1-208ENST00000519004 SPRY4Q9C004 299 aa10.67□□□□□ -0.7
PABPC1-208ENST00000519004 RAB1BQ9H0U4 201 aa10.67□□□□□ -0.7
PABPC1-208ENST00000519004 RAB9BQ9NP90 201 aa10.67□□□□□ -0.7
PABPC1-208ENST00000519004 NCBP2LA6PVI3 153 aaKnown RBP10.67□□□□□ -0.7
PABPC1-208ENST00000519004 KLF14Q8TD94 323 aaPredicted RBP10.67□□□□□ -0.7
PABPC1-208ENST00000519004 FRYQ5TBA9 3013 aa10.67□□□□□ -0.7
PABPC1-208ENST00000519004 ASIPP42127 132 aa10.66□□□□□ -0.7
PABPC1-208ENST00000519004 SLC25A39Q9BZJ4 359 aaPredicted RBP10.66□□□□□ -0.7
PABPC1-208ENST00000519004 RNF185Q96GF1 192 aa10.66□□□□□ -0.7
PABPC1-208ENST00000519004 C8orf49Q96NF6 230 aa10.66□□□□□ -0.7
PABPC1-208ENST00000519004 RASL11BQ9BPW5 248 aa10.66□□□□□ -0.7
PABPC1-208ENST00000519004 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
PABPC1-208ENST00000519004 SCGB2A1O75556 95 aa10.65□□□□□ -0.7
PABPC1-208ENST00000519004 LGALS1P09382 135 aaKnown RBP10.65□□□□□ -0.7
PABPC1-208ENST00000519004 TNFRSF1AP19438 455 aa10.65□□□□□ -0.7
PABPC1-208ENST00000519004 MEIG1Q5JSS6 88 aa10.65□□□□□ -0.7
PABPC1-208ENST00000519004 TMEM240Q5SV17 173 aa10.65□□□□□ -0.7
PABPC1-208ENST00000519004 C10orf55Q5SWW7 151 aa10.65□□□□□ -0.7
PABPC1-208ENST00000519004 RASL10AQ92737 203 aa10.65□□□□□ -0.7
PABPC1-208ENST00000519004 TRGV9Q99603 122 aa10.65□□□□□ -0.7
PABPC1-208ENST00000519004 C12orf49Q9H741 205 aa10.65□□□□□ -0.7
PABPC1-208ENST00000519004 SPANXA1Q9NS26 97 aa10.65□□□□□ -0.7
PABPC1-208ENST00000519004 H3BVH4 76 aa10.65□□□□□ -0.71
PABPC1-208ENST00000519004 PRR30Q53SZ7 412 aaPredicted RBP10.65□□□□□ -0.71
PABPC1-208ENST00000519004 Q6ZQT7 251 aa10.65□□□□□ -0.71
PABPC1-208ENST00000519004 C1orf210Q8IVY1 113 aa10.65□□□□□ -0.71
PABPC1-208ENST00000519004 ZNRF1Q8ND25 227 aa10.65□□□□□ -0.71
PABPC1-208ENST00000519004 PROCRQ9UNN8 238 aa10.65□□□□□ -0.71
PABPC1-208ENST00000519004 NBEAQ8NFP9 2946 aa10.64□□□□□ -0.71
PABPC1-208ENST00000519004 CCL11P51671 97 aa10.64□□□□□ -0.71
PABPC1-208ENST00000519004 LYRM7Q5U5X0 104 aa10.64□□□□□ -0.71
PABPC1-208ENST00000519004 NXT2Q9NPJ8 142 aaKnown RBP10.64□□□□□ -0.71
PABPC1-208ENST00000519004 MDFICQ9P1T7 246 aa10.64□□□□□ -0.71
PABPC1-208ENST00000519004 NDUFA3O95167 84 aa10.64□□□□□ -0.71
PABPC1-208ENST00000519004 SPRNQ5BIV9 151 aa10.64□□□□□ -0.71
PABPC1-208ENST00000519004 TMEM14CQ9P0S9 112 aa10.64□□□□□ -0.71
PABPC1-208ENST00000519004 ZNRD1Q9P1U0 126 aa10.64□□□□□ -0.71
PABPC1-208ENST00000519004 IGHV3OR15-7A0A075B7D8 119 aa10.63□□□□□ -0.71
PABPC1-208ENST00000519004 TRAV8-2A0A0B4J237 113 aa10.63□□□□□ -0.71
PABPC1-208ENST00000519004 IGHV5-10-1A0A0J9YXX1 117 aa10.63□□□□□ -0.71
PABPC1-208ENST00000519004 PCNX2A6NKB5 2137 aa10.63□□□□□ -0.71
PABPC1-208ENST00000519004 MAGEA5P43359 124 aa10.63□□□□□ -0.71
PABPC1-208ENST00000519004 SUB1P53999 127 aaKnown RBP eCLIP10.63□□□□□ -0.711e-11■□□□□ 9.5
PABPC1-208ENST00000519004 VPS13AQ96RL7 3174 aa10.63□□□□□ -0.71
PABPC1-208ENST00000519004 TNFRSF6BO95407 300 aa10.63□□□□□ -0.71
PABPC1-208ENST00000519004 NAV3Q8IVL0 2385 aa10.62□□□□□ -0.71
PABPC1-208ENST00000519004 SH2D1AO60880 128 aa10.62□□□□□ -0.71
PABPC1-208ENST00000519004 CD7P09564 240 aa10.62□□□□□ -0.71
PABPC1-208ENST00000519004 OR11H6Q8NGC7 330 aa10.62□□□□□ -0.71
PABPC1-208ENST00000519004 C17orf77Q96MU5 243 aa10.62□□□□□ -0.71
PABPC1-208ENST00000519004 HIGD1AQ9Y241 93 aa10.62□□□□□ -0.71
PABPC1-208ENST00000519004 TGFAP01135 160 aa10.62□□□□□ -0.71
PABPC1-208ENST00000519004 PLNP26678 52 aa10.62□□□□□ -0.71
PABPC1-208ENST00000519004 CSDC2Q9Y534 153 aaKnown RBP10.62□□□□□ -0.71
PABPC1-208ENST00000519004 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
PABPC1-208ENST00000519004 TMEM78Q5T7P6 136 aa10.61□□□□□ -0.71
PABPC1-208ENST00000519004 NRGNQ92686 78 aa10.61□□□□□ -0.71
PABPC1-208ENST00000519004 TMEM126AQ9H061 195 aa10.61□□□□□ -0.71
PABPC1-208ENST00000519004 SVILO95425 2214 aa10.61□□□□□ -0.71
PABPC1-208ENST00000519004 GATA1P15976 413 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-208ENST00000519004 Q0VFX4 171 aa10.6□□□□□ -0.71
PABPC1-208ENST00000519004 SIGLEC15Q6ZMC9 328 aa10.6□□□□□ -0.71
PABPC1-208ENST00000519004 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
PABPC1-208ENST00000519004 LINC01587Q99440 93 aa10.6□□□□□ -0.71
PABPC1-208ENST00000519004 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
PABPC1-208ENST00000519004 TRBV19A0A075B6N1 114 aa10.6□□□□□ -0.71
PABPC1-208ENST00000519004 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.6□□□□□ -0.71
PABPC1-208ENST00000519004 SRRM5B3KS81 715 aa10.6□□□□□ -0.71
PABPC1-208ENST00000519004 TIMM8AO60220 97 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-208ENST00000519004 Q8N8P6 123 aa10.6□□□□□ -0.71
PABPC1-208ENST00000519004 SCGB1C2P0DMR2 95 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 NDUFA11Q86Y39 141 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 OR10J6PQ8NGY7 276 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 TMEM167AQ8TBQ9 72 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 MYOZ3Q8TDC0 251 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 ZNF296Q8WUU4 475 aaPredicted RBP10.59□□□□□ -0.71
PABPC1-208ENST00000519004 IGHV3-21A0A0B4J1V1 117 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 SLC25A20O43772 301 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 IGLC6P0CF74 106 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 LYZP61626 148 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 C5orf47Q569G3 176 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 GUSBP11Q6P575 273 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 C3orf56Q8N813 242 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 PLEKHB2Q96CS7 222 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 SPXQ9BT56 116 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 MRPL20Q9BYC9 149 aaKnown RBP10.59□□□□□ -0.71
PABPC1-208ENST00000519004 RAXQ9Y2V3 346 aa10.59□□□□□ -0.71
PABPC1-208ENST00000519004 A0A1W2PPI3 338 aa10.58□□□□□ -0.72
PABPC1-208ENST00000519004 CXCL12P48061 93 aa10.58□□□□□ -0.72
PABPC1-208ENST00000519004 ZNF575Q86XF7 245 aa10.58□□□□□ -0.72
PABPC1-208ENST00000519004 C15orf53Q8NAA6 179 aa10.58□□□□□ -0.72
PABPC1-208ENST00000519004 AAMDCQ9H7C9 122 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms