RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 OR10J4P0C629 311 aa9.51□□□□□ -0.89
VEGFA-219ENST00000518824 HIST1H1EP10412 219 aaKnown RBP9.51□□□□□ -0.89
VEGFA-219ENST00000518824 AZU1P20160 251 aa9.51□□□□□ -0.89
VEGFA-219ENST00000518824 FFAR4Q5NUL3 377 aa9.51□□□□□ -0.89
VEGFA-219ENST00000518824 KLK5Q9Y337 293 aaPredicted RBP9.51□□□□□ -0.89
VEGFA-219ENST00000518824 LOC102723971A0A1B0GUV8 181 aa9.5□□□□□ -0.89
VEGFA-219ENST00000518824 CT45A10P0DMU9 189 aa9.5□□□□□ -0.89
VEGFA-219ENST00000518824 ERCC8Q13216 396 aa9.5□□□□□ -0.89
VEGFA-219ENST00000518824 OXA1LQ15070 435 aa9.5□□□□□ -0.89
VEGFA-219ENST00000518824 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
VEGFA-219ENST00000518824 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
VEGFA-219ENST00000518824 FXYD5Q96DB9 178 aa9.5□□□□□ -0.89
VEGFA-219ENST00000518824 DKK2Q9UBU2 259 aa9.5□□□□□ -0.89
VEGFA-219ENST00000518824 YTHDF2Q9Y5A9 579 aaKnown RBP9.5□□□□□ -0.89
VEGFA-219ENST00000518824 SMIM9A6NGZ8 99 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 IGLL5B9A064 214 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 G3V3Q6 166 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 J3KRW8 73 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 INSP01308 110 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 HBE1P02100 147 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 GUK1Q16774 197 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 RRN3P1Q2M238 152 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 RGS21Q2M5E4 152 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 SCGB1C1Q8TD33 95 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 C2CD4CQ8TF44 421 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 PHYHIPLQ96FC7 376 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 TMEM208Q9BTX3 173 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 OR51M1Q9H341 326 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 APLNQ9ULZ1 77 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 FUT9Q9Y231 359 aa9.49□□□□□ -0.89
VEGFA-219ENST00000518824 PLAC8L1A1L4L8 177 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 NPIPB6E9PJ23 425 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 C17orf112F2Z3M2 114 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 ZNF253O75346 499 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 IFNA5P01569 189 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 AMBPP02760 352 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 GIPP09681 153 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-219ENST00000518824 NBEAP1P0C6P0 100 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 RAB2AP61019 212 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 ICAM4Q14773 271 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 PPP1R14DQ9NXH3 145 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 TIMM9Q9Y5J7 89 aa9.48□□□□□ -0.89
VEGFA-219ENST00000518824 IGKV2-40A0A087WW87 121 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-219ENST00000518824 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 RNF222A6NCQ9 220 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 IGKV2D-40P01614 121 aaPredicted RBP9.47□□□□□ -0.89
VEGFA-219ENST00000518824 SPART-AS1P0CW21 52 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 CDKN1BP46527 198 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 GFI1BQ5VTD9 330 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 FAM122CQ6P4D5 195 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 OR10J6PQ8NGY7 276 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 RNF141Q8WVD5 230 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 AQP10Q96PS8 301 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 LINC01587Q99440 93 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 MRPL32Q9BYC8 188 aaKnown RBP9.47□□□□□ -0.89
VEGFA-219ENST00000518824 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
VEGFA-219ENST00000518824 DEFB131BA0A096LNP1 70 aa9.46□□□□□ -0.9
VEGFA-219ENST00000518824 C11orf94C9JXX5 98 aa9.46□□□□□ -0.9
VEGFA-219ENST00000518824 SMLR1H3BR10 107 aa9.46□□□□□ -0.9
VEGFA-219ENST00000518824 HMGB3O15347 200 aaKnown RBP9.46□□□□□ -0.9
VEGFA-219ENST00000518824 OR7C2O60412 319 aa9.46□□□□□ -0.9
VEGFA-219ENST00000518824 HTN1P15515 57 aa9.46□□□□□ -0.9
VEGFA-219ENST00000518824 Q6ZQT7 251 aa9.46□□□□□ -0.9
VEGFA-219ENST00000518824 HSD17B11Q8NBQ5 300 aa9.46□□□□□ -0.9
VEGFA-219ENST00000518824 VGLL1Q99990 258 aa9.46□□□□□ -0.9
VEGFA-219ENST00000518824 KCNIP2Q9NS61 270 aa9.46□□□□□ -0.9
VEGFA-219ENST00000518824 KMT2AQ03164 3969 aa9.45□□□□□ -0.9
VEGFA-219ENST00000518824 IGHV4-4A0A075B6R2 117 aa9.45□□□□□ -0.9
VEGFA-219ENST00000518824 TMEM189A5PLL7 270 aa9.45□□□□□ -0.9
VEGFA-219ENST00000518824 PDE6HQ13956 83 aa9.45□□□□□ -0.9
VEGFA-219ENST00000518824 MRPL53Q96EL3 112 aaKnown RBP9.45□□□□□ -0.9
VEGFA-219ENST00000518824 NIPSNAP3BQ9BS92 247 aa9.45□□□□□ -0.9
VEGFA-219ENST00000518824 SH3BGRL3Q9H299 93 aa9.45□□□□□ -0.9
VEGFA-219ENST00000518824 FXYD6-FXYD2A0A087WZ82 144 aa9.44□□□□□ -0.9
VEGFA-219ENST00000518824 TRAV12-3A0A0B4J271 114 aa9.44□□□□□ -0.9
VEGFA-219ENST00000518824 ATP6V0CP27449 155 aa9.44□□□□□ -0.9
VEGFA-219ENST00000518824 RANP62826 216 aaKnown RBP9.44□□□□□ -0.9
VEGFA-219ENST00000518824 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
VEGFA-219ENST00000518824 CD300CQ08708 224 aa9.44□□□□□ -0.9
VEGFA-219ENST00000518824 PRR9Q5T870 116 aa9.44□□□□□ -0.9
VEGFA-219ENST00000518824 RPL7L1Q6DKI1 246 aaKnown RBP9.44□□□□□ -0.9
VEGFA-219ENST00000518824 OR2T35Q8NGX2 323 aa9.44□□□□□ -0.9
VEGFA-219ENST00000518824 FAM19A4Q96LR4 140 aa9.44□□□□□ -0.9
VEGFA-219ENST00000518824 TNFSF18Q9UNG2 199 aa9.44□□□□□ -0.9
VEGFA-219ENST00000518824 PRELID1Q9Y255 219 aa9.44□□□□□ -0.9
VEGFA-219ENST00000518824 HTN3P15516 51 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 M6PRP20645 277 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 TAS2R60P59551 318 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 ACOT6Q3I5F7 207 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-219ENST00000518824 LGALS9CQ6DKI2 356 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 Q8TAT8 98 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 ODF3Q96PU9 254 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 Q9H3A6 140 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 AAMDCQ9H7C9 122 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 VPS13DQ5THJ4 4388 aa9.43□□□□□ -0.9
VEGFA-219ENST00000518824 TSPOP30536 169 aa9.42□□□□□ -0.9
VEGFA-219ENST00000518824 DAD1P61803 113 aa9.42□□□□□ -0.9
VEGFA-219ENST00000518824 KHDC3LQ587J8 217 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms