RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 TNP2Q05952 138 aa12.09□□□□□ -0.47
CTNNA1-206ENST00000517980 CNPY1Q3B7I2 92 aa12.09□□□□□ -0.47
CTNNA1-206ENST00000517980 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-206ENST00000517980 LINC00588Q9Y4M8 146 aa12.09□□□□□ -0.47
CTNNA1-206ENST00000517980 NBDYA0A0U1RRE5 68 aa12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 H7BYZ3 331 aa12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 CT45A10P0DMU9 189 aa12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 IGLC2P0DOY2 106 aa12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 CCL18P55774 89 aa12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 FAM3BP58499 235 aaPredicted RBP12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 GFI1BQ5VTD9 330 aa12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 ZNF493Q6ZR52 646 aa12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 Q6ZRG5 221 aa12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 TMEM263Q8WUH6 116 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 C11orf1Q9H5F2 150 aa12.08□□□□□ -0.48
CTNNA1-206ENST00000517980 TRAV12-3A0A0B4J271 114 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 GAGE12BA1L429 117 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 GAGE7O76087 117 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 GAGE12FP0CL80 117 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 GAGE12GP0CL81 117 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 GAGE12IP0CL82 117 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 RAB31Q13636 194 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 CLINT1Q14677 625 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 CCDC28AQ8IWP9 274 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 C12orf45Q8N5I9 185 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 ZNF431Q8TF32 576 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 ZNF586Q9NXT0 402 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
CTNNA1-206ENST00000517980 A0A0J9YY99 117 aa12.06□□□□□ -0.48
CTNNA1-206ENST00000517980 SSX7Q7RTT5 188 aa12.06□□□□□ -0.48
CTNNA1-206ENST00000517980 C2orf50Q96LR7 162 aa12.06□□□□□ -0.48
CTNNA1-206ENST00000517980 KRTAP4-5Q9BYR2 181 aa12.06□□□□□ -0.48
CTNNA1-206ENST00000517980 UQCC1Q9NVA1 299 aa12.06□□□□□ -0.48
CTNNA1-206ENST00000517980 TRAV26-1A0A087WT03 109 aa12.05□□□□□ -0.48
CTNNA1-206ENST00000517980 S100A10P60903 97 aa12.05□□□□□ -0.48
CTNNA1-206ENST00000517980 ERCC8Q13216 396 aa12.05□□□□□ -0.48
CTNNA1-206ENST00000517980 C6orf223Q8N319 242 aa12.05□□□□□ -0.48
CTNNA1-206ENST00000517980 OR1L4Q8NGR5 311 aa12.05□□□□□ -0.48
CTNNA1-206ENST00000517980 C20orf144Q9BQM9 153 aa12.05□□□□□ -0.48
CTNNA1-206ENST00000517980 NUDT15Q9NV35 164 aa12.05□□□□□ -0.48
CTNNA1-206ENST00000517980 WDR83OSQ9Y284 106 aa12.05□□□□□ -0.48
CTNNA1-206ENST00000517980 UBE2L5PA0A1B0GUS4 154 aa12.04□□□□□ -0.48
CTNNA1-206ENST00000517980 IGSF23A1L1A6 192 aa12.04□□□□□ -0.48
CTNNA1-206ENST00000517980 H2AFB2P0C5Z0 115 aa12.04□□□□□ -0.48
CTNNA1-206ENST00000517980 HOXA5P20719 270 aa12.04□□□□□ -0.48
CTNNA1-206ENST00000517980 BAXQ07812 192 aa12.04□□□□□ -0.48
CTNNA1-206ENST00000517980 RAB32Q13637 225 aa12.04□□□□□ -0.48
CTNNA1-206ENST00000517980 GNPNAT1Q96EK6 184 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-206ENST00000517980 SLC39A9Q9NUM3 307 aa12.04□□□□□ -0.48
CTNNA1-206ENST00000517980 SNURFLB1AK76 121 aa12.03□□□□□ -0.48
CTNNA1-206ENST00000517980 M0R3E3 92 aa12.03□□□□□ -0.48
CTNNA1-206ENST00000517980 TMEM252Q8N6L7 170 aa12.03□□□□□ -0.48
CTNNA1-206ENST00000517980 LINC00612Q8N6U2 182 aa12.03□□□□□ -0.48
CTNNA1-206ENST00000517980 Q9H8V8 135 aa12.03□□□□□ -0.48
CTNNA1-206ENST00000517980 ABCA13Q86UQ4 5058 aa12.02□□□□□ -0.48
CTNNA1-206ENST00000517980 NPIPB6E9PJ23 425 aa12.02□□□□□ -0.49
CTNNA1-206ENST00000517980 RLN2P04090 185 aa12.02□□□□□ -0.49
CTNNA1-206ENST00000517980 PVALBP20472 110 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-206ENST00000517980 S100A11P31949 105 aa12.02□□□□□ -0.49
CTNNA1-206ENST00000517980 LEPP41159 167 aa12.02□□□□□ -0.49
CTNNA1-206ENST00000517980 RPL29P47914 159 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-206ENST00000517980 IL15RAQ13261 267 aa12.02□□□□□ -0.49
CTNNA1-206ENST00000517980 GUK1Q16774 197 aa12.02□□□□□ -0.49
CTNNA1-206ENST00000517980 VWC2Q2TAL6 325 aa12.02□□□□□ -0.49
CTNNA1-206ENST00000517980 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 PYYP10082 97 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 M6PRP20645 277 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 FGF7P21781 194 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 SULT1A1P50225 295 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 ESRGQ1W209 222 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 GCSAMLQ5JQS6 135 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 Q6ZTI0 123 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 RXFP4Q8TDU9 374 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 BLNKQ8WV28 456 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 PFDN5Q99471 154 aa12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 LYRM2Q9NU23 88 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-206ENST00000517980 TRBV19A0A075B6N1 114 aa12□□□□□ -0.49
CTNNA1-206ENST00000517980 NDUFB4O95168 129 aa12□□□□□ -0.49
CTNNA1-206ENST00000517980 CD300CQ08708 224 aa12□□□□□ -0.49
CTNNA1-206ENST00000517980 EXOC3-AS1Q8N2X6 119 aa12□□□□□ -0.49
CTNNA1-206ENST00000517980 AGPAT4-IT1Q9H0P7 198 aa12□□□□□ -0.49
CTNNA1-206ENST00000517980 TMPRSS5Q9H3S3 457 aa12□□□□□ -0.49
CTNNA1-206ENST00000517980 GSN-AS1Q9NRJ2 163 aa12□□□□□ -0.49
CTNNA1-206ENST00000517980 TIMM9Q9Y5J7 89 aa12□□□□□ -0.49
CTNNA1-206ENST00000517980 FAM240BA0A1B0GVZ2 78 aa11.99□□□□□ -0.49
CTNNA1-206ENST00000517980 HIST1H1EP10412 219 aaKnown RBP11.99□□□□□ -0.49
CTNNA1-206ENST00000517980 RNASE4P34096 147 aaKnown RBP11.99□□□□□ -0.49
CTNNA1-206ENST00000517980 NHLH2Q02577 135 aa11.99□□□□□ -0.49
CTNNA1-206ENST00000517980 BTN1A1Q13410 526 aa11.99□□□□□ -0.49
CTNNA1-206ENST00000517980 ODF3Q96PU9 254 aa11.99□□□□□ -0.49
CTNNA1-206ENST00000517980 PYGO2Q9BRQ0 406 aa11.99□□□□□ -0.49
CTNNA1-206ENST00000517980 KRTAP1-5Q9BYS1 174 aa11.99□□□□□ -0.49
CTNNA1-206ENST00000517980 GPN1Q9HCN4 374 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-206ENST00000517980 C7orf71A4D174 169 aa11.98□□□□□ -0.49
CTNNA1-206ENST00000517980 ZNF324O75467 553 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-206ENST00000517980 SIX6O95475 246 aa11.98□□□□□ -0.49
CTNNA1-206ENST00000517980 HBG1P69891 147 aa11.98□□□□□ -0.49
CTNNA1-206ENST00000517980 HBG2P69892 147 aa11.98□□□□□ -0.49
CTNNA1-206ENST00000517980 Q6ZQT7 251 aa11.98□□□□□ -0.49
CTNNA1-206ENST00000517980 STX12Q86Y82 276 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms