RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 GUK1Q16774 197 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 MIR17HGQ75NE6 70 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 SMIM3Q9BZL3 60 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 PPP1R14DQ9NXH3 145 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 PLA2G2EQ9NZK7 142 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 TMEM14CQ9P0S9 112 aa10.08□□□□□ -0.8
PDGFRB-202ENST00000517488 TRBV19A0A075B6N1 114 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 ZNF705GA8MUZ8 300 aaPredicted RBP10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 NDUFB4O95168 129 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 HIST1H1EP10412 219 aaKnown RBP10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 FCN2Q15485 313 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 RRN3P1Q2M238 152 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 FAM222AQ5U5X8 452 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 FAM167A-AS1Q96KT0 104 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 SLC25A2Q9BXI2 301 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 WFDC1Q9HC57 220 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 DKK2Q9UBU2 259 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 APLNQ9ULZ1 77 aa10.07□□□□□ -0.8
PDGFRB-202ENST00000517488 DEFB131BA0A096LNP1 70 aa10.06□□□□□ -0.8
PDGFRB-202ENST00000517488 ZNF253O75346 499 aa10.06□□□□□ -0.8
PDGFRB-202ENST00000517488 KIR3DS1Q14943 382 aa10.06□□□□□ -0.8
PDGFRB-202ENST00000517488 LGALS9CQ6DKI2 356 aa10.06□□□□□ -0.8
PDGFRB-202ENST00000517488 RPP25LQ8N5L8 163 aaKnown RBP10.06□□□□□ -0.8
PDGFRB-202ENST00000517488 OR10J6PQ8NGY7 276 aa10.06□□□□□ -0.8
PDGFRB-202ENST00000517488 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
PDGFRB-202ENST00000517488 M0R3E3 92 aa10.05□□□□□ -0.8
PDGFRB-202ENST00000517488 BLNKQ8WV28 456 aa10.05□□□□□ -0.8
PDGFRB-202ENST00000517488 LINC01587Q99440 93 aa10.05□□□□□ -0.8
PDGFRB-202ENST00000517488 MED28Q9H204 178 aa10.05□□□□□ -0.8
PDGFRB-202ENST00000517488 KCNIP2Q9NS61 270 aa10.05□□□□□ -0.8
PDGFRB-202ENST00000517488 IGHV4-4A0A075B6R2 117 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 C17orf112F2Z3M2 114 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 IFNA5P01569 189 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 AZU1P20160 251 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 CDKN1BP46527 198 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 TCTAP57738 103 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 EXOC3-AS1Q8N2X6 119 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 SCGB1C1Q8TD33 95 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 NIPSNAP3BQ9BS92 247 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 TIMM9Q9Y5J7 89 aa10.04□□□□□ -0.8
PDGFRB-202ENST00000517488 ERCC8Q13216 396 aa10.03□□□□□ -0.8
PDGFRB-202ENST00000517488 PDE6HQ13956 83 aa10.03□□□□□ -0.8
PDGFRB-202ENST00000517488 Q5BKY6 102 aa10.03□□□□□ -0.8
PDGFRB-202ENST00000517488 FFAR4Q5NUL3 377 aa10.03□□□□□ -0.8
PDGFRB-202ENST00000517488 FXYD5Q96DB9 178 aa10.03□□□□□ -0.8
PDGFRB-202ENST00000517488 MRPL53Q96EL3 112 aaKnown RBP10.03□□□□□ -0.8
PDGFRB-202ENST00000517488 MRPL32Q9BYC8 188 aaKnown RBP10.03□□□□□ -0.8
PDGFRB-202ENST00000517488 OR51M1Q9H341 326 aa10.03□□□□□ -0.8
PDGFRB-202ENST00000517488 FUT9Q9Y231 359 aa10.03□□□□□ -0.8
PDGFRB-202ENST00000517488 TEX48A0A1B0GUV7 120 aa10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 PLAC8L1A1L4L8 177 aa10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 NPIPB6E9PJ23 425 aa10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 EIF3GO75821 320 aaKnown RBP eCLIP10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 OR10J4P0C629 311 aa10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 NBEAP1P0C6P0 100 aa10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 TAS2R60P59551 318 aa10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 GFI1BQ5VTD9 330 aa10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 TMEM256Q8N2U0 113 aa10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 PAXXQ9BUH6 204 aa10.02□□□□□ -0.81
PDGFRB-202ENST00000517488 J3KRW8 73 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 HTN1P15515 57 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 HTN3P15516 51 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 TSPOP30536 169 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 ICAM4Q14773 271 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 RNF141Q8WVD5 230 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 ZNF503Q96F45 646 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 ODF3Q96PU9 254 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 PRELID1Q9Y255 219 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 FRAS1Q86XX4 4008 aa10.01□□□□□ -0.81
PDGFRB-202ENST00000517488 OR7C2O60412 319 aa10□□□□□ -0.81
PDGFRB-202ENST00000517488 LEPP41159 167 aa10□□□□□ -0.81
PDGFRB-202ENST00000517488 DAD1P61803 113 aa10□□□□□ -0.81
PDGFRB-202ENST00000517488 OXA1LQ15070 435 aa10□□□□□ -0.81
PDGFRB-202ENST00000517488 FAM122CQ6P4D5 195 aa10□□□□□ -0.81
PDGFRB-202ENST00000517488 PHYHIPLQ96FC7 376 aa10□□□□□ -0.81
PDGFRB-202ENST00000517488 AGPAT4-IT1Q9H0P7 198 aa10□□□□□ -0.81
PDGFRB-202ENST00000517488 AAMDCQ9H7C9 122 aa10□□□□□ -0.81
PDGFRB-202ENST00000517488 DNAH2Q9P225 4427 aa10□□□□□ -0.81
PDGFRB-202ENST00000517488 IGKV2-40A0A087WW87 121 aaPredicted RBP9.99□□□□□ -0.81
PDGFRB-202ENST00000517488 LYRM9A8MSI8 78 aa9.99□□□□□ -0.81
PDGFRB-202ENST00000517488 H7BYZ3 331 aa9.99□□□□□ -0.81
PDGFRB-202ENST00000517488 IGKV2D-40P01614 121 aaPredicted RBP9.99□□□□□ -0.81
PDGFRB-202ENST00000517488 GIPP09681 153 aaPredicted RBP9.99□□□□□ -0.81
PDGFRB-202ENST00000517488 RGS21Q2M5E4 152 aa9.99□□□□□ -0.81
PDGFRB-202ENST00000517488 AQP10Q96PS8 301 aa9.99□□□□□ -0.81
PDGFRB-202ENST00000517488 C20orf144Q9BQM9 153 aa9.99□□□□□ -0.81
PDGFRB-202ENST00000517488 NDUFAF3Q9BU61 184 aa9.99□□□□□ -0.81
PDGFRB-202ENST00000517488 TRAV12-3A0A0B4J271 114 aa9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 DEFB130BP0DP73 79 aa9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 DEFB130AP0DP74 79 aa9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 RAB2AP61019 212 aa9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 UBE2L3P68036 154 aaKnown RBP9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 RNASE8Q8TDE3 154 aaKnown RBP9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 C16orf74Q96GX8 76 aa9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 FAM19A4Q96LR4 140 aa9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 LINC00477Q96M19 166 aa9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 VGLL1Q99990 258 aa9.98□□□□□ -0.81
PDGFRB-202ENST00000517488 M6PRP20645 277 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms