RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 BAGE2Q86Y30 109 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 ANAPC16Q96DE5 110 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SMIM12Q96EX1 92 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 C16orf92Q96LL3 132 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CITED2Q99967 270 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TUBA4BQ9H853 241 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CLEC5AQ9NY25 188 aa5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TSSC4Q9Y5U2 329 aaPredicted RBP5.81□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TRAV8-2A0A0B4J237 113 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TRBV6-1A0A0K0K1D8 114 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 A0A1B0GUS0 222 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 A0A1W2PRX2 142 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CXorf65A6NEN9 183 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 FBLL1A6NHQ2 334 aaKnown RBP5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 C2orf70A6NJV1 201 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 K7EN84 100 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 PPP1R2P9O14990 202 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 GCGP01275 180 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 IGLV2-8P01709 118 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 EDN2P20800 178 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CBLN1P23435 193 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 HLA-DMBP28068 263 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 ERVFC1-1P60608 527 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SRSF2Q01130 221 aaKnown RBP5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 FLI1Q01543 452 aaPredicted RBP5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 OR5I1Q13606 314 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 PSG3Q16557 428 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SAMD13Q5VXD3 122 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 LCN12Q6JVE5 192 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 PRNTQ86SH4 94 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 Q86TA4 180 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 C15orf54Q8N8G6 183 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TMEM75Q8N9X5 138 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 NHLRC2Q8NBF2 726 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 OR10G8Q8NGN5 311 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 MRPL53Q96EL3 112 aaKnown RBP5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SFRP2Q96HF1 295 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SGK494Q96LW2 274 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 NRN1Q9NPD7 142 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 PEMTQ9UBM1 199 aa5.8□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SETD2Q9BYW2 2564 aaPredicted RBP5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 IGKV2-40A0A087WW87 121 aaPredicted RBP5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TRAV8-1A0A0A6YYK1 113 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 CCL24O00175 119 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 LTAP01374 205 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 IGKV2D-40P01614 121 aaPredicted RBP5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 IGLV2-11P01706 119 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 FOLR2P14207 255 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 S100PP25815 95 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 HIST2H2BDQ6DRA6 164 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 TMEM183AQ8IXX5 376 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 RNF182Q8N6D2 247 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 OR9G4Q8NGQ1 327 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 RAX2Q96IS3 184 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 DUX3Q96PT4 197 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 BIN3Q9NQY0 253 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 OSTCQ9NRP0 149 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 MLXQ9UH92 298 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 PSG8Q9UQ74 426 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 ZFP30Q9Y2G7 519 aa5.79□□□□□ -1.48
SCARNA20.1-201ENST00000516009 IGKV3-7A0A075B6H7 116 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 COLCA2A8K830 154 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 ZNF705FA8MVS1 300 aaPredicted RBP5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SOCS3O14543 225 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 PRB4P10163 310 aaPredicted RBP5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 ID1P41134 155 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 FHL3Q13643 280 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 IBA57Q5T440 356 aaKnown RBP5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 PRR27Q6MZM9 219 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 KCNIP4Q6PIL6 250 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 FAM24BQ8N5W8 94 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 DLX4Q92988 240 aaPredicted RBP5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 MLST8Q9BVC4 326 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 SELENOKQ9Y6D0 94 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 URGCP-MRPS24S4R325 110 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 C2CD3Q4AC94 2353 aa5.78□□□□□ -1.48
SCARNA20.1-201ENST00000516009 WNK1Q9H4A3 2382 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 RBAKDNA6NC62 111 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 CYSRT1A8MQ03 144 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 PRAC2D3DTV9 90 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 ELOBQ15370 118 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 NSUN5P1Q3KNT7 163 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 SAPCD1Q5SSQ6 148 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 FAM231DQ6ZW35 169 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 NDUFA11Q86Y39 141 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 WFDC3Q8IUB2 231 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 GBGT1Q8N5D6 347 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 ZNF738Q8NE65 137 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 DYNLRB2Q8TF09 96 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 IMMP2LQ96T52 175 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 VGLL1Q99990 258 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 NDFIP1Q9BT67 221 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 RNASE7Q9H1E1 156 aaKnown RBP5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 MS4A6AQ9H2W1 248 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 ZNF492Q9P255 531 aa5.77□□□□□ -1.49
SCARNA20.1-201ENST00000516009 ADARB2-AS1A8MUL3 147 aa5.76□□□□□ -1.49
SCARNA20.1-201ENST00000516009 ZNF705GA8MUZ8 300 aaPredicted RBP5.76□□□□□ -1.49
SCARNA20.1-201ENST00000516009 OVOL1O14753 267 aa5.76□□□□□ -1.49
SCARNA20.1-201ENST00000516009 GATCO43716 136 aaKnown RBP5.76□□□□□ -1.49
SCARNA20.1-201ENST00000516009 CSN3P07498 182 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms