RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 RNASE4P34096 147 aaKnown RBP8.11□□□□□ -1.11
SMAD1-216ENST00000515527 DNAL1Q4LDG9 190 aa8.11□□□□□ -1.11
SMAD1-216ENST00000515527 TRGV9Q99603 122 aa8.11□□□□□ -1.11
SMAD1-216ENST00000515527 A0A087X0K7 114 aa8.1□□□□□ -1.11
SMAD1-216ENST00000515527 MEIS3P1A6NDR6 274 aa8.1□□□□□ -1.11
SMAD1-216ENST00000515527 GATA1P15976 413 aaPredicted RBP8.1□□□□□ -1.11
SMAD1-216ENST00000515527 NMSQ5H8A3 153 aa8.1□□□□□ -1.11
SMAD1-216ENST00000515527 ATRAIDQ6UW56 229 aa8.1□□□□□ -1.11
SMAD1-216ENST00000515527 AHSA2Q719I0 299 aa8.1□□□□□ -1.11
SMAD1-216ENST00000515527 UFD1Q92890 307 aa8.1□□□□□ -1.11
SMAD1-216ENST00000515527 PRADC1Q9BSG0 188 aa8.1□□□□□ -1.11
SMAD1-216ENST00000515527 SH3BGRL3Q9H299 93 aa8.1□□□□□ -1.11
SMAD1-216ENST00000515527 A0A0G2JRQ6 117 aa8.09□□□□□ -1.11
SMAD1-216ENST00000515527 PMP2P02689 132 aa8.09□□□□□ -1.11
SMAD1-216ENST00000515527 CCR6P51684 374 aa8.09□□□□□ -1.11
SMAD1-216ENST00000515527 LPCAT3Q6P1A2 487 aa8.09□□□□□ -1.11
SMAD1-216ENST00000515527 CCDC71LQ8N9Z2 235 aa8.09□□□□□ -1.11
SMAD1-216ENST00000515527 OR4D10Q8NGI6 311 aa8.09□□□□□ -1.11
SMAD1-216ENST00000515527 RASL10AQ92737 203 aa8.09□□□□□ -1.11
SMAD1-216ENST00000515527 MND1Q9BWT6 205 aa8.09□□□□□ -1.11
SMAD1-216ENST00000515527 AUNIPQ9H7T9 357 aa8.09□□□□□ -1.11
SMAD1-216ENST00000515527 TRAV18A0A075B6X5 111 aa8.08□□□□□ -1.12
SMAD1-216ENST00000515527 H3BRN7 92 aa8.08□□□□□ -1.12
SMAD1-216ENST00000515527 POLR2GP62487 172 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMAD1-216ENST00000515527 NIT1Q86X76 327 aa8.08□□□□□ -1.12
SMAD1-216ENST00000515527 SLC25A29Q8N8R3 303 aa8.08□□□□□ -1.12
SMAD1-216ENST00000515527 MED4Q9NPJ6 270 aa8.08□□□□□ -1.12
SMAD1-216ENST00000515527 IFT46Q9NQC8 304 aa8.08□□□□□ -1.12
SMAD1-216ENST00000515527 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.08□□□□□ -1.12
SMAD1-216ENST00000515527 SNRPCP09234 159 aaKnown RBP8.07□□□□□ -1.12
SMAD1-216ENST00000515527 CNBPP62633 177 aaKnown RBP8.07□□□□□ -1.12
SMAD1-216ENST00000515527 Q0VG73 95 aa8.07□□□□□ -1.12
SMAD1-216ENST00000515527 OPCMLQ14982 345 aa8.07□□□□□ -1.12
SMAD1-216ENST00000515527 SPHARQ15513 63 aa8.07□□□□□ -1.12
SMAD1-216ENST00000515527 TRAM1Q15629 374 aa8.07□□□□□ -1.12
SMAD1-216ENST00000515527 Q6ZRP5 223 aa8.07□□□□□ -1.12
SMAD1-216ENST00000515527 LGI3Q8N145 548 aa8.07□□□□□ -1.12
SMAD1-216ENST00000515527 OR52I2Q8NH67 350 aa8.07□□□□□ -1.12
SMAD1-216ENST00000515527 ZNF331Q9NQX6 463 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-216ENST00000515527 MUC21A0A0G2JKD1 596 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 KLLNB2CW77 178 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 RAB3BP20337 219 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 GPX4P36969 197 aaPredicted RBP8.06□□□□□ -1.12
SMAD1-216ENST00000515527 FABP5Q01469 135 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 RHOHQ15669 191 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 TMEM183BQ1AE95 376 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 MAJINQ3KP22 176 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 TMEM183AQ8IXX5 376 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 TMEM75Q8N9X5 138 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 SLC25A38Q96DW6 304 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 LINC00477Q96M19 166 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 SLC50A1Q9BRV3 221 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 SHANK2-AS3Q9BTD1 123 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 CDIP1Q9H305 208 aa8.06□□□□□ -1.12
SMAD1-216ENST00000515527 PMS2P5A8MQ11 134 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 RGS10O43665 173 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 GPX1P07203 203 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 PI3P19957 117 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 HLA-DMAP28067 261 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 RAP2BP61225 183 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 ELOBQ15370 118 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 GPR107Q5VW38 600 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 LCN15Q6UWW0 184 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 OR10G9Q8NGN4 311 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 LINC00479Q96M42 142 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 TP53RKQ96S44 253 aa8.05□□□□□ -1.12
SMAD1-216ENST00000515527 SMIM30A4D0T7 59 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 OR4E1P0C645 316 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 CXCL2P19875 107 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 ANXA7P20073 488 aaKnown RBP8.04□□□□□ -1.12
SMAD1-216ENST00000515527 RAB31Q13636 194 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 AARDQ4LEZ3 155 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 C1orf146Q5VVC0 180 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 DHRSXQ8N5I4 330 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 STPG4Q8N801 248 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 SPXQ9BT56 116 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 HIGD1AQ9Y241 93 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 U3KQ87 197 aa8.04□□□□□ -1.12
SMAD1-216ENST00000515527 PGPA6NDG6 321 aa8.03□□□□□ -1.12
SMAD1-216ENST00000515527 CRYGAP11844 174 aa8.03□□□□□ -1.12
SMAD1-216ENST00000515527 MYL9P24844 172 aa8.03□□□□□ -1.12
SMAD1-216ENST00000515527 TAS2R46P59540 309 aa8.03□□□□□ -1.12
SMAD1-216ENST00000515527 C8orf4Q9NR00 106 aa8.03□□□□□ -1.12
SMAD1-216ENST00000515527 A0A087WX48 190 aa8.02□□□□□ -1.13
SMAD1-216ENST00000515527 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.02□□□□□ -1.13
SMAD1-216ENST00000515527 TRAV1-2A0A0B4J238 106 aa8.02□□□□□ -1.13
SMAD1-216ENST00000515527 FBLL1A6NHQ2 334 aaKnown RBP8.02□□□□□ -1.13
SMAD1-216ENST00000515527 SMIM18P0DKX4 95 aa8.02□□□□□ -1.13
SMAD1-216ENST00000515527 PGAM2P15259 253 aa8.02□□□□□ -1.13
SMAD1-216ENST00000515527 TSPAN5P62079 268 aa8.02□□□□□ -1.13
SMAD1-216ENST00000515527 ERCC8Q13216 396 aa8.02□□□□□ -1.13
SMAD1-216ENST00000515527 TMEM182Q6ZP80 229 aaPredicted RBP8.02□□□□□ -1.13
SMAD1-216ENST00000515527 OR1S1Q8NH92 325 aa8.02□□□□□ -1.13
SMAD1-216ENST00000515527 PYDC1Q8WXC3 89 aa8.02□□□□□ -1.13
SMAD1-216ENST00000515527 RHBDL2Q9NX52 303 aa8.02□□□□□ -1.13
SMAD1-216ENST00000515527 LSM2Q9Y333 95 aaKnown RBP8.02□□□□□ -1.13
SMAD1-216ENST00000515527 IGKV2-24A0A0C4DH68 120 aa8.01□□□□□ -1.13
SMAD1-216ENST00000515527 H3BTX0 84 aa8.01□□□□□ -1.13
SMAD1-216ENST00000515527 CRPP02741 224 aa8.01□□□□□ -1.13
SMAD1-216ENST00000515527 TCRBP04435 133 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms