RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CITED2Q99967 270 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-213ENST00000515418 RNASE7Q9H1E1 156 aaKnown RBP6.95□□□□□ -1.3
CPNE4-213ENST00000515418 IGKV2-40A0A087WW87 121 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-213ENST00000515418 TRAV8-2A0A0B4J237 113 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 TMEM213A2RRL7 107 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 IGKV2D-40P01614 121 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-213ENST00000515418 TAS2R60P59551 318 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 KLF5Q13887 457 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-213ENST00000515418 LCN12Q6JVE5 192 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 PRNTQ86SH4 94 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 GBGT1Q8N5D6 347 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 OR1N2Q8NGR9 330 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 C4orf3Q8WVX3 66 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 SFRP2Q96HF1 295 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 JMJD8Q96S16 334 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 UFC1Q9Y3C8 167 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 RNF114Q9Y508 228 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 A0A087X0K7 114 aa6.94□□□□□ -1.3
CPNE4-213ENST00000515418 A0A1W2PS18 150 aa6.94□□□□□ -1.3
CPNE4-213ENST00000515418 LINC01619G3V211 115 aa6.94□□□□□ -1.3
CPNE4-213ENST00000515418 K7EMT4 169 aa6.94□□□□□ -1.3
CPNE4-213ENST00000515418 TCF21O43680 179 aa6.94□□□□□ -1.3
CPNE4-213ENST00000515418 DPF1Q92782 380 aa6.94□□□□□ -1.3
CPNE4-213ENST00000515418 GRAMD2BQ96HH9 432 aa6.94□□□□□ -1.3
CPNE4-213ENST00000515418 VGLL1Q99990 258 aa6.94□□□□□ -1.3
CPNE4-213ENST00000515418 VWFP04275 2813 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 TGIF2-C20orf24A0A0A6YYL0 155 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 H7BYZ3 331 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 GCGP01275 180 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 CXCL1P09341 107 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 CBLN1P23435 193 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 DEFB1P60022 68 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 ERVFC1-1P60608 527 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 ERCC8Q13216 396 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 ELOBQ15370 118 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 PRR27Q6MZM9 219 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 ADAMTSL5Q6ZMM2 481 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 WFDC3Q8IUB2 231 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 DLX4Q92988 240 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-213ENST00000515418 FMC1Q96HJ9 113 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 RAX2Q96IS3 184 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 C16orf92Q96LL3 132 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 YPEL4Q96NS1 127 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 TUBA4BQ9H853 241 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 TMEM242Q9NWH2 141 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 LY96Q9Y6Y9 160 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 ZNF253O75346 499 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 NDUFA7O95182 113 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 LTAP01374 205 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 ZNF705DP0CH99 300 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-213ENST00000515418 ZNF705BP0CI00 300 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-213ENST00000515418 CSN1S1P47710 185 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 PROK1P58294 105 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 FAM3BP58499 235 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-213ENST00000515418 PSG3Q16557 428 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 LINC00322Q6ZN03 302 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-213ENST00000515418 TCF24Q7RTU0 167 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 OR10G8Q8NGN5 311 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 C20orf173Q96LM9 149 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 CTDSP1Q9GZU7 261 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 PSG8Q9UQ74 426 aa6.93□□□□□ -1.3
CPNE4-213ENST00000515418 AGRNO00468 2067 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 NOTCH3Q9UM47 2321 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 C2orf70A6NJV1 201 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 LGALS9O00182 355 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 PFN1P07737 140 aaKnown RBP6.92□□□□□ -1.3
CPNE4-213ENST00000515418 FOLR2P14207 255 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 TFPI2P48307 235 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 KRTAP10-3P60369 221 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 FLI1Q01543 452 aaPredicted RBP6.92□□□□□ -1.3
CPNE4-213ENST00000515418 Q86TA4 180 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 C1QL4Q86Z23 238 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 C15orf54Q8N8G6 183 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 ANAPC16Q96DE5 110 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 MLST8Q9BVC4 326 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 NRN1Q9NPD7 142 aa6.92□□□□□ -1.3
CPNE4-213ENST00000515418 CXorf65A6NEN9 183 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 K7EQM0 130 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 CA1P00915 261 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-213ENST00000515418 S100A9P06702 114 aaKnown RBP6.91□□□□□ -1.3
CPNE4-213ENST00000515418 REC114Q7Z4M0 266 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 TMEM75Q8N9X5 138 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 NUDT10Q8NFP7 164 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 Q8TAT8 98 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 NUDT11Q96G61 164 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 C8orf49Q96NF6 230 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 SLC50A1Q9BRV3 221 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 MLXQ9UH92 298 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 V9GYV3 84 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 A8MWP6 167 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 CCL24O00175 119 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 SOCS3O14543 225 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 NSUN5P1Q3KNT7 163 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 IBA57Q5T440 356 aaKnown RBP6.91□□□□□ -1.3
CPNE4-213ENST00000515418 PRELID1Q9Y255 219 aa6.91□□□□□ -1.3
CPNE4-213ENST00000515418 TSSC4Q9Y5U2 329 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-213ENST00000515418 RAB5AP20339 215 aa6.9□□□□□ -1.3
CPNE4-213ENST00000515418 TMEM183AQ8IXX5 376 aa6.9□□□□□ -1.3
CPNE4-213ENST00000515418 OR9G4Q8NGQ1 327 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms