RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 RPEQ96AT9 228 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 DYSFO75923 2080 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 IGLV2-23P01705 113 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 C10orf55Q5SWW7 151 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 TEN1Q86WV5 123 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 TMEM160Q9NX00 188 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 PCSK5Q92824 1860 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 TRGV5A0A0B4J1U4 118 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 SH2D1AO60880 128 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 CEACAM4O75871 244 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 SRD5A1P18405 259 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 SMCPP49901 116 aaPredicted RBP10.09□□□□□ -0.79
SMAD1-215ENST00000515385 MORN3Q6PF18 240 aaPredicted RBP10.09□□□□□ -0.79
SMAD1-215ENST00000515385 NFE4Q86UQ8 179 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 Q8N8P6 123 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 MYOZ3Q8TDC0 251 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 NRGNQ92686 78 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 SHANK2-AS3Q9BTD1 123 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 DKK4Q9UBT3 224 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 BRWD1Q9NSI6 2320 aa10.09□□□□□ -0.79
SMAD1-215ENST00000515385 SMKR1H3BMG3 65 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 M0QXV9 152 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 GATA4P43694 442 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 Q71RC1 249 aaPredicted RBP10.08□□□□□ -0.8
SMAD1-215ENST00000515385 GLMPQ8WWB7 406 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 GAFA1Q96PS6 74 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 TMEM126AQ9H061 195 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 RNF7Q9UBF6 113 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 KIAA0100Q14667 2235 aaKnown RBP10.08□□□□□ -0.8
SMAD1-215ENST00000515385 TRAV40A0A0B4J280 105 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 TNFRSF6BO95407 300 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 ZNF688P0C7X2 276 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 PDE6HQ13956 83 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 FAM169BQ8N8A8 192 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 C8orf31Q8N9H6 132 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 RNF185Q96GF1 192 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 TANC2Q9HCD6 1990 aa10.08□□□□□ -0.8
SMAD1-215ENST00000515385 TRBV20-1A0A075B6N2 111 aa10.07□□□□□ -0.8
SMAD1-215ENST00000515385 A4D1N5 150 aa10.07□□□□□ -0.8
SMAD1-215ENST00000515385 IGLC6P0CF74 106 aa10.07□□□□□ -0.8
SMAD1-215ENST00000515385 IGFBP4P22692 258 aa10.07□□□□□ -0.8
SMAD1-215ENST00000515385 HCP5Q6MZN7 132 aa10.07□□□□□ -0.8
SMAD1-215ENST00000515385 SBSPONQ8IVN8 264 aa10.07□□□□□ -0.8
SMAD1-215ENST00000515385 CNFNQ9BYD5 112 aa10.07□□□□□ -0.8
SMAD1-215ENST00000515385 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
SMAD1-215ENST00000515385 H3BRN7 92 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 K7ESF4 209 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 RHODO00212 210 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 PPIFP30405 207 aaKnown RBP10.06□□□□□ -0.8
SMAD1-215ENST00000515385 RPL27AP46776 148 aaKnown RBP10.06□□□□□ -0.8
SMAD1-215ENST00000515385 FHL3Q13643 280 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 RUSC1-AS1Q66K80 236 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 LINC00311Q8N616 119 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 C8orf49Q96NF6 230 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 RASL11BQ9BPW5 248 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 DEFB127Q9H1M4 99 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 AAMDCQ9H7C9 122 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 SPRR3Q9UBC9 169 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 TMSB15BA0A087X1C1 80 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 IGHV1-18A0A0C4DH31 117 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 K7EMI3 77 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 PIP4P1Q86T03 277 aa10.06□□□□□ -0.8
SMAD1-215ENST00000515385 B9A039 149 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 UBE2D3P61077 147 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 UBE2D2P62837 147 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 MDS2Q8NDY4 140 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 CARD19Q96LW7 228 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 ZNRD1Q9P1U0 126 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 CSDC2Q9Y534 153 aaKnown RBP10.05□□□□□ -0.8
SMAD1-215ENST00000515385 A8MWV9 139 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 RBP4P02753 201 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 ASIPP42127 132 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 PSMB2P49721 201 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 Q6Q795 121 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 TNCP24821 2201 aa10.05□□□□□ -0.8
SMAD1-215ENST00000515385 H7C1H1 209 aa10.04□□□□□ -0.8
SMAD1-215ENST00000515385 CD40P25942 277 aa10.04□□□□□ -0.8
SMAD1-215ENST00000515385 NDUFV3P56181 108 aaKnown RBP10.04□□□□□ -0.8
SMAD1-215ENST00000515385 OR11H6Q8NGC7 330 aa10.04□□□□□ -0.8
SMAD1-215ENST00000515385 CCL13Q99616 98 aa10.04□□□□□ -0.8
SMAD1-215ENST00000515385 UBE2D1P51668 147 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 LAGE3Q14657 143 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 MRGPRG-AS1Q2M3A8 158 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 DUX4L9Q6RFH8 374 aaPredicted RBP10.03□□□□□ -0.8
SMAD1-215ENST00000515385 PI4KAP42356 2102 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 IGLV2-18A0A075B6J9 118 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 F8VRH5 84 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 MRPS12O15235 138 aaKnown RBP10.03□□□□□ -0.8
SMAD1-215ENST00000515385 SPRY3O43610 288 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 FCN3O75636 299 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 WT1P19544 449 aaPredicted RBP10.03□□□□□ -0.8
SMAD1-215ENST00000515385 C1orf210Q8IVY1 113 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 C17orf77Q96MU5 243 aa10.03□□□□□ -0.8
SMAD1-215ENST00000515385 EGR2P11161 476 aaPredicted RBP10.02□□□□□ -0.81
SMAD1-215ENST00000515385 PRTN3P24158 256 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 PRR30Q53SZ7 412 aaPredicted RBP10.02□□□□□ -0.81
SMAD1-215ENST00000515385 SPRNQ5BIV9 151 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms