RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 DNAH3Q8TD57 4116 aa15.55■□□□□ 0.08
LSM6-207ENST00000515311 PGPA6NDG6 321 aa15.55■□□□□ 0.08
LSM6-207ENST00000515311 GGTLC3B5MD39 225 aa15.55■□□□□ 0.08
LSM6-207ENST00000515311 M0R3E3 92 aa15.55■□□□□ 0.08
LSM6-207ENST00000515311 NMBP08949 121 aa15.55■□□□□ 0.08
LSM6-207ENST00000515311 UBE2G2P60604 165 aa15.55■□□□□ 0.08
LSM6-207ENST00000515311 RXFP4Q8TDU9 374 aa15.55■□□□□ 0.08
LSM6-207ENST00000515311 SAV1Q9H4B6 383 aaPredicted RBP15.55■□□□□ 0.08
LSM6-207ENST00000515311 GNG13Q9P2W3 67 aa15.55■□□□□ 0.08
LSM6-207ENST00000515311 IFNA1P01562 189 aa15.54■□□□□ 0.08
LSM6-207ENST00000515311 DEFB125Q8N687 156 aa15.54■□□□□ 0.08
LSM6-207ENST00000515311 C5orf17Q8NAS9 161 aa15.54■□□□□ 0.08
LSM6-207ENST00000515311 A0A0J9YX75 114 aa15.53■□□□□ 0.08
LSM6-207ENST00000515311 ZNF705FA8MVS1 300 aaPredicted RBP15.53■□□□□ 0.08
LSM6-207ENST00000515311 PAGE4O60829 102 aa15.53■□□□□ 0.08
LSM6-207ENST00000515311 CSN1S1P47710 185 aa15.53■□□□□ 0.08
LSM6-207ENST00000515311 RAB14P61106 215 aa15.53■□□□□ 0.08
LSM6-207ENST00000515311 SUMO1P63165 101 aaKnown RBP15.53■□□□□ 0.08
LSM6-207ENST00000515311 ZNF124Q15973 351 aa15.53■□□□□ 0.08
LSM6-207ENST00000515311 EBLN2Q6P2I7 272 aa15.53■□□□□ 0.08
LSM6-207ENST00000515311 CMTM2Q8TAZ6 248 aa15.53■□□□□ 0.08
LSM6-207ENST00000515311 TCEAL7Q9BRU2 100 aa15.53■□□□□ 0.08
LSM6-207ENST00000515311 A8MZ25 164 aa15.52■□□□□ 0.08
LSM6-207ENST00000515311 PRB2P02812 416 aaPredicted RBP15.52■□□□□ 0.08
LSM6-207ENST00000515311 HLA-DRB4P13762 266 aa15.52■□□□□ 0.08
LSM6-207ENST00000515311 TAGLN2P37802 199 aaKnown RBP15.52■□□□□ 0.08
LSM6-207ENST00000515311 ACTL10Q5JWF8 245 aa15.52■□□□□ 0.08
LSM6-207ENST00000515311 CST9LP1Q5W188 147 aa15.52■□□□□ 0.08
LSM6-207ENST00000515311 OR8A1Q8NGG7 326 aa15.52■□□□□ 0.08
LSM6-207ENST00000515311 CITED4Q96RK1 184 aa15.52■□□□□ 0.08
LSM6-207ENST00000515311 SRD5A3Q9H8P0 318 aa15.52■□□□□ 0.08
LSM6-207ENST00000515311 HLA-DRB4X5D2U9 266 aa15.52■□□□□ 0.08
LSM6-207ENST00000515311 KNCNA6PVL3 124 aa15.51■□□□□ 0.07
LSM6-207ENST00000515311 PRAC2D3DTV9 90 aa15.51■□□□□ 0.07
LSM6-207ENST00000515311 F6UB75 175 aa15.51■□□□□ 0.07
LSM6-207ENST00000515311 SLC25A5P05141 298 aaKnown RBP15.51■□□□□ 0.07
LSM6-207ENST00000515311 IGHV4-30-4P0DP06 118 aa15.51■□□□□ 0.07
LSM6-207ENST00000515311 DEFB1P60022 68 aa15.51■□□□□ 0.07
LSM6-207ENST00000515311 GDF5OSQ5U4N7 250 aa15.51■□□□□ 0.07
LSM6-207ENST00000515311 CCDC28AQ8IWP9 274 aa15.51■□□□□ 0.07
LSM6-207ENST00000515311 PCNPQ8WW12 178 aaKnown RBP15.51■□□□□ 0.07
LSM6-207ENST00000515311 CLUHP3Q96NS8 147 aa15.51■□□□□ 0.07
LSM6-207ENST00000515311 TXNDC17Q9BRA2 123 aa15.51■□□□□ 0.07
LSM6-207ENST00000515311 DIRC3C9JPN6 131 aa15.5■□□□□ 0.07
LSM6-207ENST00000515311 H3BMM0 161 aa15.5■□□□□ 0.07
LSM6-207ENST00000515311 K7EIL1 84 aa15.5■□□□□ 0.07
LSM6-207ENST00000515311 RGS13O14921 159 aa15.5■□□□□ 0.07
LSM6-207ENST00000515311 DUSP14O95147 198 aaKnown RBP15.5■□□□□ 0.07
LSM6-207ENST00000515311 BCL2P10415 239 aa15.5■□□□□ 0.07
LSM6-207ENST00000515311 STHQ8IWL8 128 aa15.5■□□□□ 0.07
LSM6-207ENST00000515311 OR10J6PQ8NGY7 276 aa15.5■□□□□ 0.07
LSM6-207ENST00000515311 TUBA4BQ9H853 241 aa15.5■□□□□ 0.07
LSM6-207ENST00000515311 EPDR1Q9UM22 224 aa15.5■□□□□ 0.07
LSM6-207ENST00000515311 AGRNO00468 2067 aa15.49■□□□□ 0.07
LSM6-207ENST00000515311 SERTM2A0A1B0GWG4 89 aa15.49■□□□□ 0.07
LSM6-207ENST00000515311 RBAKDNA6NC62 111 aa15.49■□□□□ 0.07
LSM6-207ENST00000515311 A8MTW9 85 aa15.49■□□□□ 0.07
LSM6-207ENST00000515311 ATP5G3P48201 142 aa15.49■□□□□ 0.07
LSM6-207ENST00000515311 CLLU1Q5K131 121 aa15.49■□□□□ 0.07
LSM6-207ENST00000515311 TRPT1Q86TN4 253 aaKnown RBP15.49■□□□□ 0.07
LSM6-207ENST00000515311 MEGF8Q7Z7M0 2845 aa15.48■□□□□ 0.07
LSM6-207ENST00000515311 C11orf94C9JXX5 98 aa15.48■□□□□ 0.07
LSM6-207ENST00000515311 NPIPB6E9PJ23 425 aa15.48■□□□□ 0.07
LSM6-207ENST00000515311 TCRAP04437 139 aa15.48■□□□□ 0.07
LSM6-207ENST00000515311 CNN1P51911 297 aaKnown RBP15.48■□□□□ 0.07
LSM6-207ENST00000515311 MEF2BQ02080 365 aaPredicted RBP15.48■□□□□ 0.07
LSM6-207ENST00000515311 HIST1H1AQ02539 215 aaPredicted RBP15.48■□□□□ 0.07
LSM6-207ENST00000515311 HAGHQ16775 308 aa15.48■□□□□ 0.07
LSM6-207ENST00000515311 HIST1H2BAQ96A08 127 aa15.48■□□□□ 0.07
LSM6-207ENST00000515311 ATG101Q9BSB4 218 aa15.48■□□□□ 0.07
LSM6-207ENST00000515311 VAX2Q9UIW0 290 aa15.48■□□□□ 0.07
LSM6-207ENST00000515311 IGKV2-40A0A087WW87 121 aaPredicted RBP15.47■□□□□ 0.07
LSM6-207ENST00000515311 LOC102723971A0A1B0GUV8 181 aa15.47■□□□□ 0.07
LSM6-207ENST00000515311 IGKV2D-40P01614 121 aaPredicted RBP15.47■□□□□ 0.07
LSM6-207ENST00000515311 GNG5P63218 68 aa15.47■□□□□ 0.07
LSM6-207ENST00000515311 C9orf47Q6ZRZ4 202 aa15.47■□□□□ 0.07
LSM6-207ENST00000515311 RBFOX3A6NFN3 312 aa15.46■□□□□ 0.07
LSM6-207ENST00000515311 K7EQM0 130 aa15.46■□□□□ 0.07
LSM6-207ENST00000515311 ZNF705DP0CH99 300 aaPredicted RBP15.46■□□□□ 0.07
LSM6-207ENST00000515311 ZNF705BP0CI00 300 aaPredicted RBP15.46■□□□□ 0.07
LSM6-207ENST00000515311 GOLT1AQ6ZVE7 132 aa15.46■□□□□ 0.07
LSM6-207ENST00000515311 CYB561D1Q8N8Q1 229 aa15.46■□□□□ 0.07
LSM6-207ENST00000515311 FAM210AQ96ND0 272 aa15.46■□□□□ 0.07
LSM6-207ENST00000515311 RPH3ALQ9UNE2 315 aa15.46■□□□□ 0.07
LSM6-207ENST00000515311 LOC102724200A0A096LPH7 203 aaPredicted RBP15.45■□□□□ 0.06
LSM6-207ENST00000515311 RBMY1BA6NDE4 496 aaKnown RBP15.45■□□□□ 0.06
LSM6-207ENST00000515311 RBMY1EA6NEQ0 496 aaKnown RBP15.45■□□□□ 0.06
LSM6-207ENST00000515311 F6UZH7 168 aa15.45■□□□□ 0.06
LSM6-207ENST00000515311 PEX7O00628 323 aa15.45■□□□□ 0.06
LSM6-207ENST00000515311 RBMY1DP0C7P1 496 aaKnown RBP15.45■□□□□ 0.06
LSM6-207ENST00000515311 PRB4P10163 310 aaPredicted RBP15.45■□□□□ 0.06
LSM6-207ENST00000515311 LINC00322Q6ZN03 302 aaPredicted RBP15.45■□□□□ 0.06
LSM6-207ENST00000515311 OR4B1Q8NGF8 309 aa15.45■□□□□ 0.06
LSM6-207ENST00000515311 LINC00477Q96M19 166 aa15.45■□□□□ 0.06
LSM6-207ENST00000515311 FBLL1A6NHQ2 334 aaKnown RBP15.44■□□□□ 0.06
LSM6-207ENST00000515311 PDE6DO43924 150 aa15.44■□□□□ 0.06
LSM6-207ENST00000515311 ZNF506Q5JVG8 444 aa15.44■□□□□ 0.06
LSM6-207ENST00000515311 TMEM78Q5T7P6 136 aa15.44■□□□□ 0.06
LSM6-207ENST00000515311 AMTNQ6UX39 209 aa15.44■□□□□ 0.06
LSM6-207ENST00000515311 ODF3Q96PU9 254 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms