RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 LOC102724200A0A096LPH7 203 aaPredicted RBP11.96□□□□□ -0.49
PROM1-218ENST00000514967 RBAKDNA6NC62 111 aa11.96□□□□□ -0.49
PROM1-218ENST00000514967 UBE2CO00762 179 aa11.96□□□□□ -0.49
PROM1-218ENST00000514967 HMGB3O15347 200 aaKnown RBP11.96□□□□□ -0.49
PROM1-218ENST00000514967 PRB2P02812 416 aaPredicted RBP11.96□□□□□ -0.49
PROM1-218ENST00000514967 SLC25A5P05141 298 aaKnown RBP11.96□□□□□ -0.49
PROM1-218ENST00000514967 MORN3Q6PF18 240 aaPredicted RBP11.96□□□□□ -0.49
PROM1-218ENST00000514967 STHQ8IWL8 128 aa11.96□□□□□ -0.49
PROM1-218ENST00000514967 RPUSD4Q96CM3 377 aaKnown RBP11.96□□□□□ -0.49
PROM1-218ENST00000514967 WFDC10AQ9H1F0 79 aa11.96□□□□□ -0.49
PROM1-218ENST00000514967 Q9H3A6 140 aa11.96□□□□□ -0.49
PROM1-218ENST00000514967 SERTM2A0A1B0GWG4 89 aa11.95□□□□□ -0.5
PROM1-218ENST00000514967 RBMY1BA6NDE4 496 aaKnown RBP11.95□□□□□ -0.5
PROM1-218ENST00000514967 RBMY1EA6NEQ0 496 aaKnown RBP11.95□□□□□ -0.5
PROM1-218ENST00000514967 RBMY1DP0C7P1 496 aaKnown RBP11.95□□□□□ -0.5
PROM1-218ENST00000514967 RANP62826 216 aaKnown RBP11.95□□□□□ -0.5
PROM1-218ENST00000514967 ALKAL2Q6UX46 152 aa11.95□□□□□ -0.5
PROM1-218ENST00000514967 RNF182Q8N6D2 247 aa11.95□□□□□ -0.5
PROM1-218ENST00000514967 ZNF738Q8NE65 137 aa11.95□□□□□ -0.5
PROM1-218ENST00000514967 OR8A1Q8NGG7 326 aa11.95□□□□□ -0.5
PROM1-218ENST00000514967 B9D2Q9BPU9 175 aa11.95□□□□□ -0.5
PROM1-218ENST00000514967 PPP1R14DQ9NXH3 145 aa11.95□□□□□ -0.5
PROM1-218ENST00000514967 H3BTX0 84 aa11.94□□□□□ -0.5
PROM1-218ENST00000514967 IFNA7P01567 189 aa11.94□□□□□ -0.5
PROM1-218ENST00000514967 FRMD6-AS1P0C7T7 363 aa11.94□□□□□ -0.5
PROM1-218ENST00000514967 CSN1S1P47710 185 aa11.94□□□□□ -0.5
PROM1-218ENST00000514967 APOC4P55056 127 aa11.94□□□□□ -0.5
PROM1-218ENST00000514967 NUTF2P61970 127 aaKnown RBP11.94□□□□□ -0.5
PROM1-218ENST00000514967 ICAM4Q14773 271 aa11.94□□□□□ -0.5
PROM1-218ENST00000514967 ODF3Q96PU9 254 aa11.94□□□□□ -0.5
PROM1-218ENST00000514967 TXNDC17Q9BRA2 123 aa11.94□□□□□ -0.5
PROM1-218ENST00000514967 TRBV7-9A0A0J9YWB2 115 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 PGPA6NDG6 321 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 ZNF705EA8MWA4 302 aaPredicted RBP11.93□□□□□ -0.5
PROM1-218ENST00000514967 EIF3GO75821 320 aaKnown RBP eCLIP11.93□□□□□ -0.5
PROM1-218ENST00000514967 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
PROM1-218ENST00000514967 HLA-DMBP28068 263 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 TAGLN2P37802 199 aaKnown RBP11.93□□□□□ -0.5
PROM1-218ENST00000514967 DEFB121Q5J5C9 76 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 ACTL10Q5JWF8 245 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 IGFL4Q6B9Z1 124 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 C5orf17Q8NAS9 161 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 ZNF680Q8NEM1 530 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 LINC00477Q96M19 166 aa11.93□□□□□ -0.5
PROM1-218ENST00000514967 FBLL1A6NHQ2 334 aaKnown RBP11.92□□□□□ -0.5
PROM1-218ENST00000514967 FAM74A7A6NL05 159 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 KNCNA6PVL3 124 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 NPIPB6E9PJ23 425 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 M0R3E3 92 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 FGF8P55075 233 aaPredicted RBP11.92□□□□□ -0.5
PROM1-218ENST00000514967 ZNF124Q15973 351 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 C9orf47Q6ZRZ4 202 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 CCDC28AQ8IWP9 274 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 OR10J6PQ8NGY7 276 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 CSTL1Q9H114 145 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 TMPRSS5Q9H3S3 457 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 MANBALQ9NQG1 85 aa11.92□□□□□ -0.5
PROM1-218ENST00000514967 ZNF705FA8MVS1 300 aaPredicted RBP11.91□□□□□ -0.5
PROM1-218ENST00000514967 NDUFS6O75380 124 aaKnown RBP11.91□□□□□ -0.5
PROM1-218ENST00000514967 AMBPP02760 352 aa11.91□□□□□ -0.5
PROM1-218ENST00000514967 NMBP08949 121 aa11.91□□□□□ -0.5
PROM1-218ENST00000514967 GDF5OSQ5U4N7 250 aa11.91□□□□□ -0.5
PROM1-218ENST00000514967 AMTNQ6UX39 209 aa11.91□□□□□ -0.5
PROM1-218ENST00000514967 Q6ZWC4 215 aa11.91□□□□□ -0.5
PROM1-218ENST00000514967 CMTM2Q8TAZ6 248 aa11.91□□□□□ -0.5
PROM1-218ENST00000514967 C1QTNF4Q9BXJ3 329 aa11.91□□□□□ -0.5
PROM1-218ENST00000514967 LENEPQ9Y5L5 61 aa11.91□□□□□ -0.5
PROM1-218ENST00000514967 GGTLC3B5MD39 225 aa11.9□□□□□ -0.5
PROM1-218ENST00000514967 DIRC3C9JPN6 131 aa11.9□□□□□ -0.5
PROM1-218ENST00000514967 NHLRC4P0CG21 123 aaPredicted RBP11.9□□□□□ -0.5
PROM1-218ENST00000514967 CNN1P51911 297 aaKnown RBP11.9□□□□□ -0.5
PROM1-218ENST00000514967 SUMO1P63165 101 aaKnown RBP11.9□□□□□ -0.5
PROM1-218ENST00000514967 HAGHQ16775 308 aa11.9□□□□□ -0.5
PROM1-218ENST00000514967 HIST1H2BAQ96A08 127 aa11.9□□□□□ -0.5
PROM1-218ENST00000514967 EPDR1Q9UM22 224 aa11.9□□□□□ -0.5
PROM1-218ENST00000514967 TP53TG1Q9Y2A0 90 aa11.9□□□□□ -0.5
PROM1-218ENST00000514967 PRAC2D3DTV9 90 aa11.89□□□□□ -0.51
PROM1-218ENST00000514967 F6UB75 175 aa11.89□□□□□ -0.51
PROM1-218ENST00000514967 IQCF2Q8IXL9 164 aa11.89□□□□□ -0.51
PROM1-218ENST00000514967 TM2D3Q9BRN9 247 aa11.89□□□□□ -0.51
PROM1-218ENST00000514967 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
PROM1-218ENST00000514967 IFNA1P01562 189 aa11.88□□□□□ -0.51
PROM1-218ENST00000514967 TCRAP04437 139 aa11.88□□□□□ -0.51
PROM1-218ENST00000514967 GIG44P09565 113 aaPredicted RBP11.88□□□□□ -0.51
PROM1-218ENST00000514967 CCL20P78556 96 aa11.88□□□□□ -0.51
PROM1-218ENST00000514967 FAM19A4Q96LR4 140 aa11.88□□□□□ -0.51
PROM1-218ENST00000514967 ATG101Q9BSB4 218 aa11.88□□□□□ -0.51
PROM1-218ENST00000514967 PRKDCP78527 4128 aaKnown RBP11.88□□□□□ -0.51
PROM1-218ENST00000514967 AGRNO00468 2067 aa11.88□□□□□ -0.51
PROM1-218ENST00000514967 F6UZH7 168 aa11.87□□□□□ -0.51
PROM1-218ENST00000514967 K7EQM0 130 aa11.87□□□□□ -0.51
PROM1-218ENST00000514967 PAGE4O60829 102 aa11.87□□□□□ -0.51
PROM1-218ENST00000514967 CRISP2P16562 243 aa11.87□□□□□ -0.51
PROM1-218ENST00000514967 TSPOP30536 169 aa11.87□□□□□ -0.51
PROM1-218ENST00000514967 DEFB1P60022 68 aa11.87□□□□□ -0.51
PROM1-218ENST00000514967 HIST1H1AQ02539 215 aaPredicted RBP11.87□□□□□ -0.51
PROM1-218ENST00000514967 ZNF767PQ75MW2 155 aa11.87□□□□□ -0.51
PROM1-218ENST00000514967 SBSPONQ8IVN8 264 aa11.87□□□□□ -0.51
PROM1-218ENST00000514967 OR4B1Q8NGF8 309 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms